Oncorhynchus gorbuscha (pink salmon): 124043173
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Entry
124043173 CDS
T07892
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124043173
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124043173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
124043173
NCBI-ProteinID:
XP_046217399
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All DBs
Position
LG09:complement(11905023..11980341)
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AA seq
958 aa
AA seq
DB search
MDLFKTATASLSVWGWGGLGVVLFLITFGPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSE
RHLERCEHSYLPAMHTGILKTLDEMRLEPKPIQIDRRLTGSNYIDEPLQQVIQFALRDYI
QYWYYTLSEDDSFLLEISQTVQNALVQFSTRSKEVDWQPYLTTRLVDDFATHLRVFRKAQ
DRLEDSKQRDLSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPP
GDFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTD
RVSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLMFVKKVCETRIQRLQSGKEVD
ALKLVANLGKLCIIPLEHILVHNIALQFFMDYMLVAGAQAELFFWLTVEGYRVTAQQQLE
VMEGWQKDGRKGGDTKGLLKAAALGVYEQYLSDKASPRVQVDEASVLQLGEKLQKDSDPT
PEIFDDIQTKVYDMMLRDERFYPSFRQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGS
PTGSINLSLDDLSNSCHDDNIQLHAFISDTGVCNDHGKTYALYAITVLRRNHDGSEDSWK
TYRRYSDFHDFHMRITEQVKFENLTAILKLPGKKTFNNMDRDFLERRKKDLNSYLQLLLN
PEMMKACPTLVHYAYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKGLPDSLA
GGMNKAADNMGRMSEKLGQDIKQAVFKVPPMLPKSDFDPEHCRVSAQLDDNVDDNIPLRV
MLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVK
KFRDSYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVF
DMFQHGPMNRRLVYVLLEGFLETLFPHYKFPELFVKLHSRSPRTARYTQKVKNTFPKR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggatctgttcaaaacagctacagccagtctgtctgtgtggggatgggggggtctagga
gtggtgctgttccttatcacttttggacccttcgctgtcttctacctggccttctatatt
ttctgcttcgtaggaggtggttttgcggtcactctgttgtttgggaaaaccaactcagag
agacatctagagaggtgtgaacactcctatcttccggccatgcacacgggtatactgaag
acattggatgagatgagactggagccgaagcctatacagatagacaggagactgactggc
tccaactacatagacgagcctcttcaacaggtcatccagtttgctttgagagattatatc
cagtactggtattacactctgagtgaggatgattcttttctgctggaaatcagccagacg
gtccagaatgctctggtacagttctccacacggtctaaagaggtggactggcagccttat
ttgaccaccagactggtggatgactttgctactcaccttcgagtcttcagaaaggcccaa
gacagactggaggacagtaaacagagggacttgtcggaggagatggtggagtcattcttt
gaggcggaggtggagatggagaggaacatctgtagagacgtggtctgcacctccctgaag
gatgaagaagggttcctgagggatctgtgtgaggtgctgctctacctgttactacctcct
ggagacttccacaacaagaacatgagatacttcctcagggagattctggcgcgaggcgtt
ctccttcccctggtcaaccagctgagtgatcctgattacatcaaccagtttgttatctgg
atgatccgggactcgagctgtaactacgaggcttttatgaacatcttgaagctgacagac
agagtgtctgaactggaggctgttaaagacaaggccctggaggaactacagtacctacga
tcactggacaccgcaggagacgatatcaatgtaataaagaaccagatcaacagtctgatg
tttgtgaagaaggtctgtgagaccaggatacagaggctacagtctgggaaggaggtggat
gctctgaaactagtggcaaacttgggcaagctgtgcatcataccactggagcacattctg
gtacacaacatcgccctgcagttctttatggactacatgctggtggctggggcccaggca
gagctgttcttctggctgacagtggagggctacagagtaacagcccagcaacaactagag
gtgatggagggatggcagaaggatggaaggaagggaggagacactaaaggactgctgaag
gctgcagcactaggggtgtatgaacagtacttatctgataaggcgtcccccagggtgcag
gtagatgaggcgtctgttctccaactgggagagaagctgcagaaggacagcgaccccacg
ccagagatattcgacgacatccagaccaaggtgtatgacatgatgcttcgtgatgagagg
ttctacccttcgttcagacagagtcctctctacatcaggatgttagctgagctggacatg
ctcaaagaaccctcctatagaggatcagatgacggagacggagaatcgttcaacggttct
ccaacaggaagcattaatctgtctctggatgacctttcaaactcctgccatgatgacaat
atacagctacacgccttcatctctgatacaggggtgtgtaacgaccacggcaagacctac
gccctctacgccatcacggtgttgcgccgtaaccacgacggcagcgaagactcctggaag
acctaccgacgctactctgacttccacgatttccacatgaggatcacggagcaggtgaag
tttgagaatttgacggcgatcctgaagctgccggggaagaagacgttcaacaacatggac
agagacttcctggagaggaggaaaaaggacctgaactcgtacctacagctgctgttgaat
ccagagatgatgaaggcctgtcctactctggttcactacgcctacgacttcctggagaat
aaacagtacagcaaggggaagggagatttcgctcgcaagatggatacgtttgtgaacccc
ctgcgtagctcgatgcgtaacgtatccaacgctgtgaagggcctgccagacagtctggct
ggagggatgaacaaggcagctgacaacatgggacgcatgtcagagaaactgggacaggac
ataaaacaggccgtgttcaaggtgcctccaatgctccccaagtctgactttgacccagag
cactgccgagtctcggcacagctggacgacaacgtagatgataacatccccctgcgtgtg
atgctgctgttgatggatgaggtgtttgacctgaaggagaggaaccagtggctccgcagg
aacatcaagaaccttctgcagcaactcatcagagccacatacggagacactatcaacagg
aagatcgtggatcatgtggacttcatgacagctccagaacaggtggccgactacgtcaag
aagttccgggattcgtactggcccaacggaatcctggccgagtctccgccacgcagggac
aagaacatccgcatgaggacgagggtcgcggccaagaccaacctattgggaatcatgcca
gatgagttgaagcacatcatcggggcggatacgactcgtaagggaatcctgcgtgtgttt
gacatgttccaacacggaccaatgaatcgtcggctggtctacgtgctcctagagggcttc
ctggagaccctgttccctcactacaagttccctgagctgtttgttaaactccactctcgc
tcgccgcgcacagccagatacacacagaaagtcaagaacaccttcccgaagaggtga
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