Oncorhynchus gorbuscha (pink salmon): 124043178
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Entry
124043178 CDS
T07892
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124043178
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
DUF4171
Motif
Other DBs
NCBI-GeneID:
124043178
NCBI-ProteinID:
XP_046217411
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All DBs
Position
LG09:complement(12655183..12861237)
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AA seq
827 aa
AA seq
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MKSNHERSNECLPPKKRDFPASTADERPLLMAPACETQRGENLTWLASVAGGHNRDISGG
NGDGGRGGQRTSTPCESDVPQYKPLCSTITTHSDFLVPSSICSSSSSHQSRVVTTSLPAM
YSSPLSPPGGTIHYTQLPHNLQVISSPYPGPYAGYLSSQRPPLPTSTSQRSHPDPYPNTT
ITSKLNQHHSVGPGRPPPQSLPPGLAISDTGPQYVQLSGSSQNVAPRTAPLPHGGTHHLH
HDPHHTLAFSGGSQVLVQYAGSGSEEPLTKREEGLPRELHNGELEKRGRFERKESKGAPS
SSSSSSSSSSHHQLHQQQSSHHHYETYTSHDASGLRTSLMLVPNSHGGQDHQSPEKLPLS
SALHPEKGSLLLGKPVYRTSSSTFTFPPALNVDSLKAAVSSLSPHTHTVIQPTHNASDAS
PISQGQLSTNFYQTGPGGQPIIGYLSGGAGGQQYHTSLSQHLLIPVSGAGATSLEAGHTA
HIATTSQPQPFPATLSHAYVATTTTTTTTNPREEHLFEVPAPYPPLSYPAGAGGSMVQAQ
LHLPVVPTPQAPSSAPSGSSLPAYFIKGSIIQLADGELKHVEDLKTEDFIHSAEISSELK
IDSSTVERIDDSHTPNFAIVQFSVGEHRAQVSVEVQLEYPFFVFGQGWSSCCPDRTTQLL
ELPCTKLSVGDVCISLTLKNLRNGSLKKTQQTQNQAMEITTSCNMGSIHGPLKPSRSSRG
GRGSARHGEQENGVGHRGSSGGMVVEGVQFASENGVGGGANLKGGQPGESESSRVAAKPA
SRKRRWSAPEGRQVERSEEVPQLTLPKPSFITQGVKISIEGRSNIGK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccatgagcgcagcaacgagtgtctgccccccaagaagagagatttccca
gccagcactgcagatgagaggcccctgttgatggcgcccgcctgcgagacccagcgagga
gagaacctgacatggctggccagtgtagctggcgggcacaacagagacattagtggaggt
aacggggatggcggtagaggtgggcagcgtaccagcactccctgtgagtctgacgtgccc
cagtacaaaccactatgctccaccatcaccacacactcagacttcctggtcccttcctcc
atctgttcctcctcttcatcacatcagtccagagtggtgaccacatcgctccctgccatg
tacagctctcctctgtccccaccaggggggaccatccactacacccagcttccccacaac
cttcaggtcatcagttccccttacccaggcccctacgctggctacctctcctcccagcgc
ccccctctacccacctccacatcccaacgctcccaccctgacccctaccccaacaccacc
atcacctccaagctgaaccagcaccactctgtgggtccaggtcgccccccaccccagtcc
ctacccccaggcctggctatatcggacactggcccccagtacgtccagctctctggttcc
tctcagaacgtggccccccggactgcccccttgccccacggagggacccaccacctgcac
cacgacccccaccacaccctggccttcagcgggggctcccaggtgctggtacagtatgcg
ggctccggctccgaggagcccctgactaagagagaggagggcctgcccagggaactgcac
aacggagagctggagaagagaggccgctttgagaggaaggaaagcaaaggagccccatca
tcatcctcctcttcttcctcctcttcctcccatcaccagctccaccagcaacagagctcc
caccatcactatgagacctatacctcccatgatgcctcaggcctacggacctctctcatg
cttgtccccaacagtcacggaggacaagaccaccagagtcccgaaaaactacccctctcc
tctgccttgcacccagagaaaggcagcctcctcctgggtaaacctgtgtaccgcacctcc
tcctccacgttcaccttcccccctgcgctcaatgtggatagtcttaaggcagccgtcagc
tccctgtctccccacactcacacagtcatccagcccacacacaatgccagcgatgcatcg
cccatctcccaaggccaactctccaccaacttctaccagactggcccaggtgggcagccc
atcatcggctatctgtctgggggtgcaggggggcaacagtaccacaccagtctgtcccag
cacctgctcatccccgtcagtggggccggagccaccagcctggaggctggccatactgcc
cacatagccaccacaagtcaaccacagcccttccctgccacactctcccacgcctacgtc
gccaccaccaccaccaccaccaccactaaccccagagaggagcatctatttgaggtcccg
gccccctaccctcctctgtcctaccctgctggggctggggggagcatggtccaggcccag
ctacacctcccggtggtcccaaccccccaggccccctcctcggccccctcgggctcctcg
ctgcccgcctacttcatcaagggctccatcatccagctggcggacggggagctgaagcat
gtggaggacctgaagacggaggacttcatccacagcgctgagatcagcagcgagctgaag
atagactcgtccaccgtagaacgcatcgacgacagccacacacccaactttgccatcgta
cagttctccgtgggtgaacaccgcgctcaggtgagtgtggaggtgcagctggagtatccc
ttcttcgtattcggccagggctggtcgtcgtgctgcccggaccggaccactcagctgtta
gaactaccctgcaccaagctctcagtgggggacgtctgcatctccctcaccctgaagaac
ctgaggaacggctccctgaagaagacccagcagacccagaaccaggccatggaaatcact
actagctgcaacatgggctccatccacgggcccctcaaaccctctaggtcttcccggggt
ggaagggggtcagccaggcacggggagcaggagaacggggtgggccatagaggctccagt
gggggaatggtggttgaaggtgttcagttcgcctcagagaatggcgtcggagggggggcc
aacttgaaaggaggccagcctggagaatcagaatccagtagggtcgccgccaagccggcg
agccgcaagaggaggtggtcggcccccgagggccgtcaggtggagaggagcgaggaggtg
ccccagttgactctacccaagccttcctttatcactcagggggtaaaaatcagcatcgaa
ggcaggtcaaatataggcaagtag
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