Oncorhynchus gorbuscha (pink salmon): 124043235
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Entry
124043235 CDS
T07892
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
ogo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124043235
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124043235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124043235
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124043235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
TackOD1
Motif
Other DBs
NCBI-GeneID:
124043235
NCBI-ProteinID:
XP_046217538
LinkDB
All DBs
Position
LG09:complement(18573449..18594257)
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AA seq
1478 aa
AA seq
DB search
MVNAMTGQLEQLSGAESIFNLAMAATGGGKIRSRRCHSASKPYAKSKQMSRSEVEHMVVI
RSQKLPGEWAQQPGLISRVTDTVKSIVPSWLQKYFRNGEAAEGGGAIVGAEQNSQAPPPN
GSEEVAPLPDGRDTPEPCTSNTEPSTSRASLNFQDVLSRPPLNRSHLHFPSLDTSLARRG
PSSLFSQPSTSSAPFVGASPSFSLVKEIKDNSSQHEDDNISTTSGFSSRASDKDVPNSKT
ASLPQLWSPEMDRTHSGPQQSQSSLKKPAFNLSVFGTSSTVSVSQSSQSSTSTMNSSVLN
SSQLGDSPFYPGKTTYGGAAAVRTARSRTAIPYQAPLRRQIRAKPAGAQPCGVTSATARR
ILQSLERMSSPLADAKRIPSTVSSPLSTSLDGSTLHLSHFQAKKKLLDSPLPPVQKLVIP
AAASVSGNRSMSFRPSLTPGGLARTPRDTPTRQSPLIPEAVAGPSQSTSSILPTYPLSST
PAFSSTGSGGGKMKRERTSTRPSSKRPEDQIAELSDLPAISLPHSPSFSLPSFSFFQPPT
ATVTPTAALTTSPVLEEPFPNKVPPTTAPSTPPSTPFTFSSPIVMATAASPPSFSPSSGF
TFSAPVVKTGLSLSNGKMATPVLAAVKHAASESMDEFEGPYKPAKVLKQGSVLDLLNGPG
FAVPVTQTSPVPKAHQETPALSTNTPSLGDLFKATTGSWDCDTCVVQNKPTDTKCVTSVT
PQLNSGPSLAKTDSIPLLSGLEGSTTTTTPAATFGALFTKPAGSWDCDTCLVQNKPDAVK
CVACETTKPGTGVKASLTMPAFLEAKTLPAAAPLLGFGDKFKKPEGAWECGVCMVQNKAQ
DTKCVSCGIAKPGATAAPPSLTPTPVSATPLLGFGAQFKKPEGAWECEVCCVENKGADKE
CVACQTPKPGAKVEPKAFGSSSFGIQSSSDSGGFKFGMGASSDSGSGGFKFGGTLLDSSS
SGGFKFGASASSDSTSTDTSSSAGFKFGGSSEGCKFAASAASTPAVDEGKKAEAPGMGAG
FKFGVGGGLSFGTAAAASTESKPPYSGFSFHLVATSDSSSSTFSLPVSTENDSGASTETT
TTTTTAAAPMFGKLAEAKATALTTPLGGSIFRESLEKDKAPSFTFGKHEKEVASMGSGFL
FSVPSKEGVASAPSTGFSFSKPDAPKDQPNAPALAFEKPEDQSETPAAEAPKPSFSFGQS
TIDAAAPKPAFGFMASTTTTSSSSSSTPASAPIPAPSTFLFGQSASTEATPAKSFLFGQS
QDSLPAPAVSLNPGPAQPFLFGSGPNAAAPSFTFGAAAPSTAAPSAAPAPFVFSPASSTG
FGSGQAPNFGQGTPHTSAPAFGSPAPSPFSATASQPPAFGAKPNSVPVFGHQANSTPAFG
SSVPTTPGGGFQFGGASVFGTSSNSTGVFAFGGAPGGSPAPSATPSIATQPSATGSGFNF
AAPPTFNIGSKSTTFTAAATGQHSIPGRKIKTAVRRKK
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgctatgacaggacagttggaacagctatccggtgccgagtcgatattcaat
ctagccatggcggccacgggtggagggaaaattagaagcagaagatgtcatagcgcttcg
aaaccttacgccaaaagcaaacagatgagcagaagtgaagtggagcatatggtcgttatc
aggagtcaaaagctaccaggagaatgggcgcagcagcctggcctgattagtcgagtgaca
gacacagtcaagagcatcgttccttcttggctgcagaaatacttcaggaatggggaggct
gcagaggggggaggggccatagtgggggcggagcagaacagccaggcccctcccccaaat
ggcagcgaggaggtagcaccccttcctgatggacgggacactccggagccctgtaccagc
aatacagaaccttcgacaagcagggcatccctgaacttccaggatgttctgtcaaggccc
cccctcaaccgctctcacctccatttcccctccttggacacctccctggcccgcaggggc
cctagctctcttttctcccagccctccacctcctctgcccccttcgttggggcctcgccc
agcttctcccttgtcaaagagatcaaggacaacagctcacagcacgaggacgacaacatc
tctaccaccagcggcttctcttcacgtgcatcagacaaagatgtacctaattcgaagacc
gcatctctaccccagctctggtccccggagatggaccggacccactctgggccacagcag
tcccagtccagtctcaagaagcctgcgttcaacctgtctgtctttgggacgtcctccact
gtgagtgtcagtcagtcaagtcagtcctccacttctacgatgaacagttcagtgctgaat
tccagtcagttgggggattcccccttctacccagggaagactacctacgggggagcggct
gctgttagaacagcccgttcacgcacagccataccgtaccaggctccattgcggagacag
atcagggccaagcctgctggggctcagccctgtggggtgaccagcgctaccgcccgacgc
atcctacagtccctggagcgcatgtccagccccctcgctgatgccaagagaatcccctct
acagtttcctctcccttatcaacatcactggatggcagcactctacacctttcacatttt
caggccaaaaagaaactgctggactctcccctccctccagtccagaagctggtgatcccg
gcggcagcgtcagtgtcggggaaccgttccatgtccttcaggccctctctgacccctggg
ggcctggctcgaacccctagagacacgcccacaagacaatcccctctgattcctgaagca
gtggcaggtccttctcaaagcacaagcagcattctacccacctaccctctgtccagcact
cctgcattcagcagcacagggtcaggaggtgggaagatgaagagggagaggaccagcaca
agaccctcttccaaacgtcctgaagaccagatcgctgagctatcggacctgccagccatc
tcgctcccccatagcccgtccttcagtctgcccagcttcagcttcttccaacctcccacc
gccacagtcacgcccactgccgctctcactacctcacctgtcctggaggagcccttccct
aataaggtgccaccgactacagccccctctacccctccctccacacctttcaccttctcc
tcccccatcgtcatggcaactgctgctagcccaccgtccttctccccgtcttctggattt
accttcagtgcacctgtagtgaaaacgggtctgtcactatccaacgggaagatggccacc
ccagtattggcagcagtgaagcacgctgcaagtgagagcatggatgagtttgaagggcca
tataaaccagccaaggtgttgaaacagggcagtgttctggacctcctgaatggacctgga
tttgccgttcctgttactcagacctcccctgtccccaaagcccaccaggagaccccagca
ctgtccaccaacaccccctcccttggggacttgttcaaagcgacaaccggttcctgggat
tgtgacacttgtgtggtgcagaacaaacccactgacaccaagtgtgtgacctctgtgacc
ccacaactaaactccggcccctctttagcaaaaactgacagtatacccttgttgtccggg
ctggagggttccaccaccaccactactcccgctgcaacttttggggccttgttcacaaag
cctgcaggaagctgggactgtgacacttgtctggttcagaacaagcctgatgctgtcaaa
tgtgtggcctgtgagacaaccaagcctgggactggagttaaggcctcactgactatgcct
gccttcttggaggctaagactctgcccgctgctgccccactcctgggctttggagacaag
tttaagaagccagagggagcatgggagtgtggcgtgtgcatggtgcagaacaaggcgcag
gacaccaagtgtgtttcctgtgggatcgctaagccaggagcaacggctgcgcctccatct
ctaactcccacccctgtcagcgccactcctctactaggctttggggcccagttcaagaag
ccagagggagcgtgggagtgtgaggtgtgctgtgttgagaacaagggagcagacaaggag
tgtgtagcctgccagacccccaagcctggagctaaagtagagcccaaagcatttggttcc
tcatcgtttgggatccagtcctcttctgactcggggggattcaagtttggcatgggggcg
tcatcggactcaggttctgggggcttcaaattcggcggcaccctcttggactcctcatct
tcagggggcttcaaatttggtgcatctgcctcatcggactctacctcgacagacaccagc
agctctgcaggcttcaaatttggaggctcctctgagggatgcaaatttgcagcttcagct
gcttccacccctgcagtggacgaggggaagaaggctgaagcccccggtatgggtgccggg
ttcaaattcggcgtcggcggtgggctctcgttcggcactgcggcagctgctagcacggag
agcaaacccccttacagtgggttctcctttcatctggtggcaacctctgattcctcctcc
tctactttcagcctccctgtttctacagagaatgacagtggagcttctacagaaaccacg
actaccaccaccacagcagcagcacctatgtttgggaagctggctgaagccaaggctact
gcgctgaccacaccactagggggcagcatattcagggaatcactagagaaagacaaggcc
ccttctttcacctttgggaagcacgagaaggaggttgcttctatgggttctgggttcctg
ttcagtgttcctagtaaagagggggtggcatcagctccatctacaggcttttccttcagt
aagccagacgcacctaaagaccagcccaatgcacctgccttggcctttgagaagccggaa
gaccagagtgagaccccagcagcagaagcccctaagccctcattcagctttgggcaaagc
acaatagatgctgcagccccaaagccagcatttgggttcatggcaagcaccaccaccacc
tcttcttcaagcagctctacccctgcctcagcccccatcccggcccccagtaccttcctg
ttcgggcagagtgcctctactgaggccaccccagccaagtccttcttgtttgggcagagc
caggacagcctgcctgcccctgcagtctctctgaaccctggcccggctcagcccttcctg
tttgggtctggacctaatgctgctgctccctccttcacttttggagcagctgcaccctcc
actgcagctccatcagcagcccctgctccatttgtattcagccctgcctcctccactggg
tttgggtcaggacaagctcccaactttggtcagggcacccctcataccagtgccccagcg
tttggttcccctgccccgtcccccttctctgccactgcctcccagccccctgccttcgga
gccaagcccaactctgtccctgtgtttggccaccaagccaactccactcctgcttttggc
tcatctgtccccaccacaccaggtggaggtttccagttcggcggagccagtgtgttcggc
acctccagtaacagcacgggggtgtttgctttcggaggggcaccaggagggtcccccgcc
ccttctgccacaccctccatcgcaacccaacccagtgcaactggaagtggtttcaacttc
gcagcgccccctacctttaatattggatcaaagagcaccaccttcactgcagctgccacc
ggacagcactcaatccccggtcgcaagatcaaaacagccgtccgacgtaagaagtaa
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