KEGG   Oncorhynchus gorbuscha (pink salmon): 124043242
Entry
124043242         CDS       T07892                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
  KO
K10881  26 proteasome complex subunit DSS1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03050  Proteasome
ogo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    124043242
  09124 Replication and repair
   03440 Homologous recombination
    124043242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124043242
   04131 Membrane trafficking [BR:ogo04131]
    124043242
   03051 Proteasome [BR:ogo03051]
    124043242
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124043242
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     124043242
Membrane trafficking [BR:ogo04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    124043242
Proteasome [BR:ogo03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     124043242
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     124043242
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 124043242
NCBI-ProteinID: XP_046217560
LinkDB
Position
LG09:18759475..18768413
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGSKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagactgtggatttgggattattagaggaggacgatgagtttgaa
gaattcccagctgaggattggacgggtctggatgaggatgaagatgcccacgtgtgggaa
gacaactgggatgatgacaacgtagaggatgacttctctaatcaactccgagcggagctg
gagaaacatggttccaagatggagacgtcgtag

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