Oncorhynchus gorbuscha (pink salmon): 124043280
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Entry
124043280 CDS
T07892
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124043280 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124043280 (gtf2e1)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
124043280 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
124043280 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
124043280
NCBI-ProteinID:
XP_046217654
LinkDB
All DBs
Position
LG01:79267451..79310496
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AA seq
454 aa
AA seq
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MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADLYTQNVEISMGEQEEQQQRRQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNS
GDDAGGAQVGVVGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAGGGGVAAARGSD
SESDTSESDEDSPTAPPPVAAAQRRPMGMEMEEEEEDDDEFEEVGADESMVMVGGRSFSY
REVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcactgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctctggatgtccttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgcttaagtttgaccgaaagcagctgcgc
tcagtgctcaatacgctcaagggcgataagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgcctgctggtc
aatgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaaccgggcgtcgttccgatgcccctgctgcttcagcaccttcactgacctggag
gccaatcaactgtttgaccccatgacagggacgtttcgctgtacgttctgccagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aatgaacaaatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccccgccctcaaacagagccgggaccgt
gcggcggcggcagcgggtgcagctgccggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacctgtacacccagaacgtggagatcagcatgggggagcaggag
gagcagcagcagcgccggcaggccagcgaggggaaggccccaagggagagacccgtgtgg
ctgacggagagcactgtgcatggaggaacgtacagcgagccagacccactcaagaactcc
ggagacgacgcgggaggagcccaggtgggcgtggtcgggctcggcggcggccaatcggac
gagaatgaggaagtgatgcgcgccctgctcattcatgagaagaggagcggtgccgggccg
gcaggaggcggagccgtagcggcaggaggcggaggcgtagcggcagccaggggcagcgac
tcggagagcgacaccagcgaatcagacgaggactctcccacggctccgccgcctgtggca
gcggcccagcggcggccgatgggcatggagatggaggaggaggaggaggatgatgacgag
tttgaggaggtgggggccgatgagtccatggtgatggtgggggggcggtcgttctcctat
cgggaggtgagccagaggccagagctagtggagaagatgagctctcaggagaaagaggcc
tacatcgagatgggacagaacatcttccaagagatgtatttctga
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integrated database retrieval system
