Oncorhynchus gorbuscha (pink salmon): 124043314
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Entry
124043314 CDS
T07892
Name
(RefSeq) zinc finger protein 40-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124043314
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124043314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_16
NOA36
Motif
Other DBs
NCBI-GeneID:
124043314
NCBI-ProteinID:
XP_046217752
LinkDB
All DBs
Position
LG09:24838631..24929497
Genome browser
AA seq
2692 aa
AA seq
DB search
MPRTKQNNPKNLKDKIEEAQNELKDTKAGAQKGINEGGRRSADNIKGLKRKKVVAENLLK
KIPKSPVKKSLQSKTSVATLQAASSKEAAPSCSYPNSPSQNPASSPSQNRDAEYVQPNAE
SSEGVTSSIDNDRLKQRDTSFSKPQSLDPISGKEESVSGVGESQQLKDSKSGETSCEGDS
LYHASAPLEVLLKAMESDFSSLSEKTKSFPVTAVEKPGRTLSAQSNSEVNAMPAIHFGLQ
IQPAHMQNDFVNKQETYTMHSSTQAVPLQTLQHATQHFTNCGEKPGLQMRFSTGSSDTLT
HSPVPSGSNSLPRSQPPVVHTCQSLSASVPSTIQVPVTPGYNPAQMATVVNFGLEQMCSI
SAKDQKPKKQGKYVCEYCSRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHK
KSHAHAIKLGLVARSDSGSGSLSVESDKALGTHSDVEESGDSDEESSTADLDPDSSQSSV
AAFSESSLLSAGTTQGNHGDAGDPSAVFPLSQRGYESKGTASLPKVVVYPVNVSPQRADS
PRVTDSSPEQATAQRQKDFQTAHLRSSITVLSSLKEVDCTSPLQDAGSEDEDQQCRTPPG
GGHGQLQRQQATDFSQQQQGKCLLSPRSLGSTDSGYFSRSESADQAMSPPSPFVKITPPT
DMDVTKNVLPNLPAVVATAMHVASVEKPRVVQGQMRPPLETKALSLEERISKLISDNEAV
VDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMARRSSSSSDIPKSPFTPTD
KSKPVFLLSVPNQYTPMDCLPITRSNSMPTTPGHSGLPPNIVQQPHPLRICQSFDDKMSS
LNDDVFSSAPSTPNPAIHSRTLVRQVAVEDFSTSEGLTSVRSMDEGYHGSSISTELMQRS
RSFEHAQDRNRKPLQSKGTMYECETCRNRYRKLENFENHKKFYCSELHGPKNKPVSVRET
EQDVFQHVMQQPLVPRTVISGIMDQQQSFRKRRKMKSVGDDDDQSPTDTNPPCSVSFDSC
QLSTASSGRPFSQHSIMVDLQPKSNPPQITQNQLVARGTEASESRLSPIRETQVNTSGKE
RGDLQRQGSGTSVIRHTNSLSKPNSFETSESIDRASPVDFMYKDGHRTGKTKTDATANLS
LESYHEKMSIPKCADQGKQGMENRVDSTLAAVAESCAAVQQSRLVRQNNIPEILVTEEPD
REHDGQSTEQGEKVADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEQSSGESSFESSL
SRSLSRDSSLSRCSSISASFDRDEPSRSESPSRGEFVNKISEHQGLPIAFNTLGVPGMIR
RAASEQISCTQPSVEILCDYRSKSFDFGSVSPCRSLPPNRSMSPMELPTSAQAFPSVQVP
LIERRRGPLVRQMSLKIGPESQQHVGRHAIPLQWLPTVFSTSQQRPQQTTNKPPLAQPFI
VHSGETLPQKNERMVQSINLGSQGQLPQIHGLPHPWHLTSRVQTCQNIQQSVVHVVVGQE
DAQNNSADSQDKSFVPKYQLQCPALRPSQTYSLSTTQGTQTTLPVLTIPIANQMQSILKS
SDVLHNVCVAQPCFQIVSNKTQSIVLPVSLQNDPPSQNLPGALQLPQILITHEQMHPSLS
VTSNLYVVDTDTKTVPETNKDRPPASTSLQVKHGLVSNTQDHIGEIQRAPSLGSLHCTQK
MAAVTLCPQQEPIASSKRMLSPANSLDIAMEKHQKRAKDEHGAACLTDGRSVNYLNSKMA
EVTRQRKLMLVRQVCTTEPVDSPIETEAPPLQPEKPVGEKDTQTPKNCKTMTPESTGKDE
PSSVVPQEQPRSALNTAPGSRVSSSVPANASLKPQDKSEEDRWSPAKSPIRPSTFHGQVK
LASSVSVVNTRDSHRLSFPSLKTATTFTWCYLMKRRPLHVPQTDQKVSAYSTWAVSPNNP
NPLGLPTKVVMSLFDSKQNSKKIHYTEAITTSMKSDILAYSSKLKDVMPKVLKPQKTENN
SKVQPESQVSSESDKDSSSSKIEPRRVKIFDGGFKSNEDYVYVRGRGRGKYICEECGIRC
KKPSMLRKHIRTHSDVRPYHCTHCNFSFKTKGNLTKHMKSKAHSKKCMEMGVSAGLEDHD
TEDSGDRSQVGSTDRPDSDGEDSEGADDDNDDDNEEEEEDSQAESGLSTNPSVSASPQHI
PSSLQAELPPSSLLAQMSIHHHHPAPLSHPQLPASDSHTHHTHGASDTESVPMLSPVSLV
KQMSISGGCSSPGPLPYSPPPHTSDTESVHMMSPVSPCRQMSIDYPDVDVPPSPPVPGKG
CSKLGQDGSLAPPTLPTSEPGVPFGTDVSTQTASFIPQTSSYSPWHFPSQGPTQGSGATQ
GTHTHLFSHLPLHSQQPSCSSYSMVPVGGIQLVPAGLPAYSTFVPIQAGTVQLTIPAVSV
IHRNTSPLPFPKSSNSPQPEGSALTPTNQPLVVQEPISSIMPCFPLGQVTGLQALGASQQ
TLQSMGLETLNVMGLTSSGGLTSTQLLSQHGLTLNATLGLQALTASPSSQSSTGPHHHHT
HHTPIPGLQILNIALPALIPSLSPLSALSPLPGPSERQGSPEAQGATRLSSQTELGPLVS
FPCAASSLPTATMRGSPVQEMTSSGSRPSSSGHRNSGGSDHMQTPGKEGRVTTSLPQPSP
APAAEAVVERAGGASEPVMPRRQSILSRQQVTEDFIDDSASSDDEDRLVIAT
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaccaagcagaacaacccgaagaaccttaaagataaaatcgaagaagcacag
aatgaactgaaagataccaaagccggcgcacagaaagggatcaatgagggtggtcggaga
agtgcagataacataaagggactgaagaggaaaaaggttgtggcagaaaacctgctgaag
aaaatacccaaatctcccgtaaagaagtccttgcagtccaagacctccgtggcaacactc
caagctgcctcgtccaaggaagccgcaccctcttgctcctaccccaacagcccttctcaa
aaccctgccagctcaccaagccagaaccgagatgcggagtatgtccagcctaatgctgaa
tcctctgagggagtgacatcctccattgacaatgataggctaaagcagagggatacgtcc
ttctcaaagccacagtctctcgatcccatcagtggtaaagaggaatctgtctctggtgtt
ggggagtctcagcagctcaaggacagtaagagtggcgaaacaagctgtgaaggtgactct
ctttaccatgctagcgctccccttgaagtcttgctcaaggctatggaatcagacttcagc
tccttgtcagaaaaaacaaaatcctttccagtcacagccgttgaaaaacctggccgaact
ctttctgctcagtctaatagtgaagtaaatgctatgccagctatacattttggactccaa
attcagcctgcgcatatgcagaatgactttgtaaataaacaagagacctacacaatgcac
tcctctacccaggctgttcccttgcagactttgcagcatgctacacagcatttcaccaac
tgtggggaaaagcctggcttgcagatgagattcagtactggctcctccgataccctaact
cattcacctgttccctcaggctccaattccttgccacggagccagccgccggtggtgcac
acatgccagtccctatcggctagtgtccctagcaccattcaagtccctgttacacctggt
tacaacccagcccagatggccacggttgtgaactttgggcttgaacagatgtgtagcatc
tcagcaaaggaccagaagcctaagaagcaggggaagtatgtgtgtgaatactgcagtcgg
gcatgtgcaaagcccagtgtgttactcaagcacatcaggtctcacacaggagagcggccc
tacccatgtgttacttgtggcttctcattcaaaactaagagcaatttgtacaagcataag
aaatcccatgctcacgcaataaaactggggcttgtggcgcgttccgactctggaagtggg
tccctctccgtggagtctgacaaagcacttggaacacattcagatgtggaggaaagtggg
gacagcgatgaggaaagtagcacagcagacctagaccctgactcatcacaaagcagtgtt
gcagcgttctctgagagcagtttgctgagtgcaggcacaacacaaggcaatcatggggat
gcaggggatccatcagctgttttccctctgagtcagaggggttatgagtccaaagggaca
gctagcctaccaaaagtggtcgtctatcctgtcaatgtctcccctcagcgggcggacagt
ccaagagtcacagactccagccctgagcaggctactgcccagcggcaaaaggacttccaa
acggcacatctgagatccagcatcaccgtcctgtcgtccttgaaagaggtggattgcaca
agccccttacaggatgcaggaagtgaagatgaagatcagcagtgcaggactccaccagga
ggcggacatggtcagcttcagaggcagcaagccacagacttttctcagcagcagcagggc
aagtgtctgcttagtccccgcagtttaggcagcacagactctggttacttctcacgttct
gaaagtgcagaccaggccatgagtcccccgagtccctttgtcaaaataaccccaccaaca
gacatggatgtcaccaaaaatgtacttcctaatctccctgcagtggttgccactgcaatg
catgtggcctctgtggagaagccacgtgttgtgcaaggacaaatgcgtcctccgttagaa
acaaaagcactctctctcgaggaacgaatctcgaagttaatatcggacaatgaggcagtg
gttgacgacaaacaactggacagtgtcaaaccaagaaggacttctctttctaggagaggt
agcatagactcccccaagtcgtatatatttaaagactcttttcaatttgaccttaaacca
atggcgagaaggtcgagttccagctcagacatacccaagtcccccttcacccccacagac
aaatctaagccagtatttcttctatctgtacccaatcagtatacaccgatggactgttta
ccaataacaagaagtaattctatgcccacaactccagggcactctggtctcccaccaaac
attgtccagcaaccccacccactacggatctgtcagtcttttgatgacaaaatgagttcc
ttaaacgatgatgtgttttcatctgccccctctaccccaaatccagcaatacattctcgt
actcttgtacgacaagtagcagtggaggatttctccacaagtgagggccttacctcagtc
cgttccatggacgaaggttaccatgggtctagcatctccactgagttaatgcaaagaagc
aggtcttttgagcatgcacaagaccgaaaccgaaagcctctgcagagcaaaggcacaatg
tatgaatgtgagacctgtcgcaataggtaccgaaaactagaaaactttgaaaatcacaag
aaattctattgttcagagctccatggtccgaaaaacaagccagtatctgtcagagagact
gagcaggatgtttttcaacatgtcatgcagcagccgttagtccccagaacagttatttca
ggtataatggaccaacagcaatcatttagaaaaagaaggaaaatgaagagtgttggtgac
gatgatgaccaatcaccaactgacaccaatcccccatgctctgtcagttttgattcttgc
caactatcaacagccagttcaggtcgtccattttctcagcactctatcatggttgatcta
cagcctaaaagcaacccaccgcaaataactcaaaatcagctagtagcaagaggtacagag
gcatcagaatcgagactgtcaccgatcagagaaacccaggttaacacctctggtaaagag
agaggcgacctacagaggcaaggcagcggtacatcagttatcagacacaccaactcttta
agcaagcccaattcctttgagacctctgaatctattgacagggcctctcctgttgatttc
atgtacaaagatggccatagaacaggaaaaactaagactgatgctactgccaatctttca
ttagagagctaccatgaaaagatgtccattcctaaatgtgccgaccaggggaaacaaggg
atggaaaaccgtgtcgacagcactttagcagcagtggctgagagctgtgctgctgtccag
cagtctcgtctggttcgccaaaataacattcctgaaatcctggtcacagaggaacccgat
cgggagcatgacggtcaaagcactgagcaaggggaaaaggttgcagatacattcaactgg
ccccagaggagcgagagcctgtccaaactaccgacagaaaagcttccacccaagaaaaag
agaattcgtctggctcagatggaacaatcctctggagaatcaagcttcgagtcctcactg
tctcgtagcctcagcagagacagtagcctctcaagatgctccagtatctcagcttccttc
gaccgggatgagccatccaggtcagaaagcccctccagaggagaatttgtgaacaaaata
tctgagcatcaagggctaccaatagccttcaacaccctgggggtccctggcatgataaga
cgtgctgcctcagaacagatcagttgcactcaaccctcagtggagatcttgtgcgactat
cgcagcaagtcctttgactttggcagtgtctccccctgcaggtctctgccacccaacagg
tcaatgtcaccaatggaactgccaacgagtgctcaagccttcccgtctgtacaggtacct
ctcattgaaaggcgaagggggcccttggtacgccagatgtctttaaagattgggccagag
agtcagcaacatgtcgggaggcatgccatacctctccagtggctccccactgtattctct
acatctcagcagaggcctcaacagactaccaacaagcctccccttgcccaaccctttatt
gtgcattctggagaaactctccctcagaagaatgaaagaatggtgcaaagcattaacttg
ggcagccaaggtcaactgcctcaaattcatggccttccacacccttggcacctaacgtcg
agggttcagacatgccaaaatatacagcaatctgtggttcatgtcgtggtcggccaagaa
gatgcccagaacaattccgctgactctcaagacaaaagctttgtgcccaaataccaactg
cagtgtcctgctctgagaccaagccaaacatactctctctctaccacacaaggtactcag
acaactttgccagtcttaacaatacctattgccaatcagatgcaaagtattttgaagtct
tcagatgttctccacaacgtctgtgtggcacaaccgtgttttcagattgtaagcaataag
acacaatcaatagtcttgcctgtaagcctacaaaatgacccaccttctcaaaacctacca
ggtgctctccaattgccacagatactgataactcatgagcagatgcacccttccctctct
gtgaccagtaacctgtatgttgtagatactgacacaaagactgtaccagaaacgaacaag
gacaggcctccagcatctactagccttcaagtaaaacacggtttagtttccaatacccag
gaccatattggtgaaattcaaagagctccctccctggggtccttacactgcacccagaaa
atggcagctgtgaccctttgcccacaacaagagcccattgcctcaagcaagagaatgctc
tcccctgccaacagcttggatatcgccatggaaaaacatcagaagcgagcaaaggatgaa
catggtgctgcatgcctcactgatggcaggtcagtcaactacctgaactccaagatggcg
gaggtaactaggcaacggaagctgatgctagtcaggcaggtgtgcaccactgaaccagtg
gacagtcccattgaaactgaggcccctccactgcaacccgagaagccagtaggtgaaaag
gacacccagactcctaagaactgcaagactatgacacctgaaagcaccggaaaggatgaa
ccatcttctgtagttccccaggaacaaccacgctctgcattaaacaccgctccagggagt
cgtgtctcctcctctgtgccagctaacgcctccctgaagcctcaagacaaaagcgaggaa
gatagatggtctcccgccaagtctcccattaggccctcgactttccatggacaggtgaaa
ttggcctcatctgtatctgtcgtcaacacacgagacagccatcgcctgtctttccccagc
ctgaaaactgccaccacctttacttggtgttacctgatgaagaggaggcctctgcatgtt
ccccagacggaccagaaggtctcggcctactccacctgggcggtgagccccaacaacccc
aacccactgggcctgcccaccaaagtggtgatgtctctctttgactccaagcagaactcg
aaaaaaatacactacacagaggccataacgacaagtatgaaatccgacatcttggcctat
tcaagcaagctaaaagacgtcatgccgaaggtcctaaagcctcagaaaactgagaataac
agcaaagtgcaacctgagagtcaggtgagcagcgagtcagacaaggattcttcctcatcc
aaaatagagccacggagggtcaaaatatttgatggaggattcaaatctaacgaggactat
gtctatgtgcgtgggcgtggtcgtggtaaatacatctgtgaggagtgtgggatccgctgc
aagaagcccagcatgctgcgtaaacacatccgcacccactctgacgtacggccctaccac
tgcacccactgcaacttctccttcaagactaaagggaatctgaccaagcatatgaagtcc
aaggctcacagtaagaagtgcatggagatgggtgtgtctgcaggcctcgaggaccatgat
acagaggactcgggagaccgtagccaggtgggcagtacagaccgcccagattcagacgga
gaggactcggagggcgctgacgatgacaacgatgatgacaacgaagaagaggaagaggac
agccaggctgagtcgggcctgtccaccaacccctcggtctcggccagcccccagcacata
ccctcctccctccaggctgagctccctcccagctccctcctggctcagatgtccatccac
caccaccacccagctcccctgtcccacccccagctccccgcatccgactcccacacccac
cacacccacggcgcctcagacacagagtccgtgcccatgctgagccccgtctccctggtc
aagcagatgtcaatctccggagggtgctcaagccctggccccctaccctactccccaccc
ccccacacctccgacactgagtcggtgcacatgatgagccctgtctcgccgtgcaggcag
atgtccatcgactaccccgatgttgacgtgccccctagtccccccgtaccaggcaagggc
tgctccaagctcggccaggatggctctttggctcctcccaccctaccaacgagtgagcca
ggtgtccctttcgggacagacgtcagcactcagaccgcctctttcatcccccagacttcc
tcctacagcccctggcactttccctcccagggcccgacccaaggatcaggggccacacag
gggacacacacgcacctcttcagtcacctgcctctgcactcccagcagccctcttgctcc
tcctacagcatggtccccgtggggggcatccagctggtgccagctggcctgccagcctac
tccaccttcgtgcccatccaggctggcactgtccagctcaccatccctgcagtgagtgtc
atccaccggaataccagtccactcccgttccccaaatcctctaactccccccagcctgag
ggctctgccttgacccccaccaaccagcccctggtggttcaggagcccatcagcagtatc
atgccctgcttccccctggggcaggtcaccggacttcaggcccttggggcctcccagcag
acgctgcagtccatgggtctggagaccctcaacgtgatgggactgaccagctcaggaggc
ctgacctccactcagctgctgtcccagcacggcctgacgctcaacgccaccctgggcctg
caggccctgactgccagccccagctcccagagcagcacgggcccccaccatcaccacacc
caccacacacccatccccggcctgcagatcctcaacattgccctgcccgcactcatcccc
tcgctcagccctctctccgccctcagtcccctccctggaccctctgagaggcagggcagc
cctgaggcccaaggggccacccgactctcctctcagactgaactaggacccttggtcagc
tttccatgtgctgcatcatcccttcccactgccaccatgagaggaagtcccgtccaggaa
atgacatcatcgggcagcagacccagcagctctgggcacaggaactccggaggctctgat
cacatgcagactccagggaaggaagggagggttacaacatctctaccacaaccctccccg
gctccagctgctgaggcggttgttgagcgggcagggggagccagtgagcctgtcatgcct
cggaggcagtcgatactgtcacggcagcaggtgacggaagactttatcgatgactcagca
tcaagcgatgacgaggaccgactggtcatcgccacctga
DBGET
integrated database retrieval system
