Oncorhynchus gorbuscha (pink salmon): 124043356
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Entry
124043356 CDS
T07892
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124043356
03036 Chromosome and associated proteins [BR:
ogo03036
]
124043356
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
124043356
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Topoisomerases
124043356
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
124043356
Centrosome formation proteins
Centriole proteins
124043356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
124043356
NCBI-ProteinID:
XP_046217841
LinkDB
All DBs
Position
LG09:28481831..28519394
Genome browser
AA seq
1656 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAAANGRGDGGKPEGGGGGAKKKGGEK
LSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIFDE
ILVNAADNKQRDKSMSTIKISIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLT
SSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDPKIK
FFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVTGF
RSYVDLYVKDKLDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHID
YVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKS
FGSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDA
GGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEI
NNIIKIVGLQYKKSYDNPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKH
TFLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAKEY
FADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYG
TQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQL
AGSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIF
TMLSPLAKMLFPAVDSSLLKFLNDDNQKVEPEWYIPILPLVLVNGAEGIGTGWACKIPNY
DHREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITELP
VRTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGLHK
VFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGAEASK
LSNQARFVLEKIEGKITIENKSKRDLIRMLVQKGFDSDPVAAWTKAQEKSLEEDDRDGND
SDGSVDSVSLSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWKED
LAVFIEELDKIEAQEQADMSAGRGTKLVKGKVGKPKVKKLHLEETLPSLYGRRVVPTITQ
AMKTDASKKMTKKKKGDADLVMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPTPAKPKA
PRVKQEKKEPGTPRARKPPTPKGSSGKKVKKRNPWSEDESKSESDLEDSEPVVIPRDTKS
QRASAAKPKYTFDFSEEEDGGEEEDDDDDAASSPARPFKDDFTASSGTKDRYNDHSNDDE
DIFPSPKQTTTTTVSPAKKKKEPESIFSSSKSACASEKSNDSDDLKLDSDGDDKAFSYSS
SSALDKPVPAKKAVKKPSDAAPKPRKAPVPKEPPKQKLDTSVWDSDSDTRSKKPATPLKG
KGGGRKRKQSESEEDDFSPKKTPGKTPKAPTSRKLSKKAAVTPPPISDDDDVDSNRFSQS
GTASRDRPCRSRAKKEVKYFAESASGSDDDQYDMFD
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagtgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcggcagcagcagcagcggcggcgaacggcagg
ggcgatgggggcaagcccgagggaggaggtggaggagccaagaagaagggaggagagaag
ttgtcagtggagagggtgtaccagaagaagacccagctggagcacatcctactgaggccc
gacacctacatcggctctgtggaacctgtcacccagcaaatgtgggttttcgatgaagac
cttggaatgaatctacgagaaatcacctacgtccctggattatacaaaatctttgatgaa
attcttgtcaacgcggccgacaacaaacagcgggataagagcatgtcgaccataaagatc
tccattgatcctgagtccaacaccatcaccatctggaacaatggtaaaggcatccctgtg
gtggaacacaaagatgagaagatgtacgttcccgctctcatcttcggacacctcctcacc
tccagtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtacggtgct
aaactctgcaatatcttcagcacaaagttcacagtggaaactgcctgcaaggagtacaaa
cacagcttcaaacagacctggcagaacaacatggggaagacgagcgaccccaagataaag
ttctttgatggggacgacttcacgtgcgtgaccttccagccggacctgtccaagttcaag
atggagaagctggacaaggacatcgtggctctgctcaccaagagggcttacgacattgct
ggctcctgcaagggcgtcaaagtcatgctcaatgggaagaaactccctgtgacagggttc
cgcagctatgtggacctgtacgtgaaggacaagctggatgaggtgggcgtggccctaaag
gtggtcaacgagtccgtcaacgagcgttgggaggtgtgtctcaccatgagtgagaaggga
ttccaacagatcagctttgtcaacagtatcgccaccaccaagggtggcagacacattgat
tacgtggtggaccagatagtagccaagctgatagaggtggtgaagaagaagaacaaagct
ggtgtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcgttg
atcgagaacccaacgtttgactcccagaccaaggagaacatgaccctccaaaccaagagc
tttggttctaagtgtcctctgtctgagaagttcatcagagcggcgactaattgtggtatt
gtggagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaagaagtgt
tcttcagtgaagtacagcaagattaaaggcatccccaagctggacgatgccaacgatgct
ggtggtaaacactcgtctgaatgcactctgatcctgactgagggagactcagccaagtcc
ctggccgtctccgggctcggcgtcatcgggcgtgatcgctatggtgtcttcccactaaga
ggaaagatcctgaatgtacgagaggccacacacaaacagatcatggagaacgcagagatc
aacaacatcatcaagatcgtgggtctgcagtacaagaagagctacgacaacccagagtct
ctgagatccctacgctacggcaagatcatgatcatgaccgatcaggatcaggatggctcc
catatcaagggtttgctcatcaacttcttccatcacaactggccatccctgctcaaacac
accttcctggaggagttcatcacgcccatcgttaaggtgaacaagaataaacaggagcat
gctttctacagcattccagagtttgacgaatggaagaaacagacagtcaactttaaaacc
tggcatataaagtactacaaaggtttgggtaccagcacaagcaaggaggccaaggagtac
tttgcagacatggagaaacacaggatcatgtttagatacgctgggacagaggacgatgct
gccatcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctcactaac
ttcatggaggacaggagacagaggaggatgcacggcctgccagagcaatacctgtacggc
acgcaggcgaaacacctctcctacaatgacttcatcaacaaagaactcatcctcttctcc
aactccgacaacgagagatccatcccatccttggtggacggactgaagccaggccagagg
aaagtgctgttcacctgtatgaagaggaatgataagagggaggtgaaggtggctcagctg
gctggttcagtagcagagatgtctgcctaccatcacggagagcaatccctgttgatgacg
atcgtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcagccgctt
ggtcagtttggtacccgcatcaacgggggcaaggatgctgccagccctcgttacatcttc
accatgctcagtcctctggccaagatgttgttcccagcggtggactccagcctgctgaag
ttcctgaatgatgacaaccagaaggtggagccagagtggtacatccccatcctccctttg
gtgctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatccccaactac
gaccacagagagatagtcaacaacctgtaccgcatgctcaacatgcaggaccccctgccc
atgctgcccagctataagaactttaaaggcgtgatccatgagttgggtcagaaccagtac
atggtcagtggagagatctctgtcctggacaagaacaccattgagatcactgagctgccc
gttcgcacctggacacaggcctacaaggagtcggtactagagcccatgctccaggggaca
gagaagactccagctctgattaatgactataaggagtaccacacggaccaaaccgtcaag
tttgtagttcgcatgtcagaggagaagctggcccaggcagaggctgctggactacacaaa
gtcttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccacatgggc
tgtctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctgcggttg
cactactacaagctgaggaaggattggttagtggggagcctgggggcggaggcttccaaa
ctgtccaatcaggcacgatttgtcctggagaagatcgaaggaaagatcacaatcgagaac
aagtctaagagggatctgatcaggatgctggtgcagaaaggctttgattcggaccctgtg
gcagcatggaccaaagcacaggaaaagtctctggaggaggatgatcgtgatggtaatgac
agtgacggctctgtggactctgtgtcattgtcgggaccaaacttcaactacatcctcaac
atgcctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagagagacatc
aagaaaggagagttgaatgagctgcagaggaagtctcctgaggatctgtggaaggaggac
ctggccgtcttcattgaagaactggataaaattgaggcccaggagcaggcagacatgagt
gcaggtagaggcaccaagctggtgaagggcaaggtgggcaaacccaaggtgaagaaactc
cacctggaggagacgctgccctcgctgtacggccgcagggtcgtacccaccatcacacag
gccatgaaaactgacgcctccaagaagatgaccaagaagaagaagggtgatgcggacctg
gtgatgaagctggaatttgatgatgagatgggagtgctggggtcagacgggggcacaggg
gagaactccctcaactcctcctctaatacaccagccccaaccccagccaagcccaaggcc
ccccgggtcaaacaggagaagaaggagccaggtactcccagagccaggaaaccccccaca
cccaaaggatcatctggtaagaaggtgaagaagcgtaacccctggtcggaggacgagtcc
aaatcagagagtgacctggaggacagtgaacctgtggtcatcccccgagacaccaagtca
caacgggcctcagcggctaagcccaagtacacatttgacttcagtgaggaagaggatgga
ggagaggaagaggatgatgatgatgatgctgcatcctcgccagcccggcccttcaaagat
gactttactgcctcctccggaactaaagaccgatacaatgaccacagcaatgatgatgaa
gatatcttcccatcgcccaaacagaccaccaccaccaccgtctcaccagcaaagaagaag
aaggaaccagagagtatattctcctcctccaaatcagcctgcgcctctgaaaagagcaat
gacagtgacgatctgaagttggacagtgacggggatgacaaggccttctcatactccagc
agctctgccttagacaaacctgtcccagctaagaaagcagtgaagaagccttcggatgca
gctcccaaacccaggaaagcaccagtacccaaagagccaccaaaacagaagttggacacg
tccgtttgggactcggactcagatacccgctccaagaagcctgcaacaccactcaaaggt
aaaggcggagggaggaagaggaagcagtctgaatctgaagaggatgatttcagtcccaag
aagactcctgggaaaacacccaaagcccctactagtaggaaactgtcaaagaaagcagcc
gtgaccccaccccccatttcagatgatgatgatgtagactccaaccgtttcagccaatcc
ggcacggcatctcgagaccgaccgtgcagaagcagggccaagaaggaagtgaagtacttt
gctgagtcagcgtcagggtcagacgacgatcagtacgacatgttcgactag
DBGET
integrated database retrieval system
