Oncorhynchus gorbuscha (pink salmon): 124043426
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Entry
124043426 CDS
T07892
Name
(RefSeq) transcriptional repressor p66-beta-like isoform X1
KO
K23194
transcriptional repressor p66
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124043426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124043426
03036 Chromosome and associated proteins [BR:
ogo03036
]
124043426
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124043426
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
124043426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
Motif
Other DBs
NCBI-GeneID:
124043426
NCBI-ProteinID:
XP_046217985
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Position
LG09:33788352..33832583
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AA seq
674 aa
AA seq
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MERMSEEALRLNLLKRGLETSEEREEALAKRLKMEGHEAMERLKMLALLKRKDLATLEGA
AAMAAGSLDGSKGGPGGSRHHHHHHQSMLAGAAAAYEEKMNGRLGGHGGPSKNGKENMVD
EPVDFSARRGDVDRERHTPSPDVIILSDNEASSPRGTPHPGERLHQANLEIFKGKNVDER
QQMIKALREELRLEEARLVLLKKLRQSQIQKENVVQKVPVVQNSPSSVQPSPIHSSQGMG
KLPVRPGMHTPEPQNLRTAQGHTVIRSGANASLPPMMMSQRVIAPNPSHLQGQRMPSKSG
MSRSSTGSMSNISYQQPTSQQVTASQRSGSSAIYMNLAHMQAAAGGVAGVGMGSGGMGAV
SPSTMSSGTGGGGSSGMSSLADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPS
AANSEFIYMVGLEEVVQSVIDSQGKLRGALSRMEPFFCAQCRIDFTPHWKQEKGGRILCE
QCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSTAPTVPNVGKAETM
IRHHALRQAPQPQASMQRGLSSSARGVLSNFAQASQLSVASGLLGMTGKQRCGGGGGGGT
SGGGGSSRIQHDGRRQIYNIPGGFLRTPYGLNIAYLNQGGVGANKGSSLADRQREYLLDM
IPPRSISQSINGQK
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggcgctgaggctgaacctgctcaagcggggcctggagacg
tccgaggagcgtgaagaagccctggccaagcgcctcaagatggagggccatgaggctatg
gagcgcctcaagatgctggccttgctcaagcgcaaggacctggccacattggaaggggcg
gcagcgatggctgccggatccctggacggcagcaaaggggggccgggggggagccgccac
caccaccaccaccaccaaagtatgctggcaggcgcggcggcggcctatgaggagaagatg
aacgggaggctggggggccacggaggccccagtaagaatggcaaggagaacatggtggac
gaaccagtggacttcagcgccagaagaggcgacgtggaccgcgagcgacacactccgtcc
ccggacgtgatcatcctgtcggacaacgaggcttccagtcccagggggacaccccacccc
ggagagaggctgcaccaggccaacctggagatcttcaaggggaagaatgtcgacgagcga
cagcagatgatcaaggctctgagggaagagctgcgtctggaggaggcccgtctggtgcta
ctcaagaagcttcggcagagccagatccagaaggagaacgttgtgcagaaggtaccggtg
gtccagaatagcccctcttcggtgcagccgtcccccatccacagttcacaggggatggga
aagctgccggtgcgccctggcatgcacaccccagagccccagaacctccgcactgcacag
ggtcacactgtcatcaggtcgggggccaacgcctccctgcccccgatgatgatgtcacag
agggtcatcgcccccaacccgtcccatctgcagggccagagaatgccctccaagtctggc
atgagccgctctagcacgggcagcatgagcaacatcagctaccagcagcccactagccag
caggtgacggcgtcccagcgttcgggctcctctgcaatctacatgaacttggcccacatg
caggcggcggctggcggcgtggccggtgtggggatgggcagcggcgggatgggtgctgtt
agcccttccaccatgtcgagcggcacaggtggcggcggcagctccggcatgagttccctg
gcggaccaggccagcagccaggcggcagccaagctggccttgcgcaaacagctggagaag
accctgctggagatcccgccgcccaagccaccagccccactcctgcacttcctgccgtcg
gcggccaacagcgagttcatctacatggtgggcctggaggaggtggtgcagagcgtcatc
gacagccagggtaagctgcggggggcgctgtcacgcatggagcccttcttctgcgcccag
tgcaggatcgacttcaccccacactggaagcaggagaaaggcgggcgtatcctctgcgag
cagtgcatgacgtccaatcagaagaaggccctgaaggcggagcacaccaataggctgaag
aacgcattcgtcaaggccctgcagcaggagcaggagattgagcaaaggctccagcagcag
gcggccctctcccccagcacggctccgactgttcccaacgtcggcaaggctgagaccatg
atccgacatcacgccctgcgtcaggctccccagcctcaggcctccatgcagcggggtctc
tccagctcggcgaggggcgtcctctccaacttcgcccaggcctcccagctctccgtggcc
agcggcctgctggggatgacggggaagcagcgctgtggaggaggtggtggtggcggaact
agtggcggcggtggcagcagtcggatccagcatgatggccgccgccagatctacaacatc
cccggtgggtttttgagaaccccttatgggttgaacattgcctacctgaaccaaggaggg
gtcggggccaacaaaggctccagcttagcggaccgccagagggagtacctgttggacatg
atcccgccacgctccatatcacagtccatcaatggacagaaatga
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