Oncorhynchus gorbuscha (pink salmon): 124043502
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Entry
124043502 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124043502
Membrane trafficking [BR:
ogo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124043502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
124043502
NCBI-ProteinID:
XP_046218118
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All DBs
Position
LG09:complement(37324204..37348737)
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AA seq
1376 aa
AA seq
DB search
MSEEDTGIPKELLESLRDAVGRKIKLTLKKRLKLEVKGDKLENRVLALASHRVFLLTARV
PAKIEQTFNYLDIQGIISNKPTQLLLEYDRGQLSLKLGSVEDVDEVVAHIGSCLHRICPG
LSPAKAMKKLTLKPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFREEVQW
DVDTIYQTQDTRELNLQDFVHLDNRDLVAIIVVLEYNQWFTKLSTKDYKLSTDVCEQILR
VVSRSSRLEELVLENAGLRSDFVQKLANALTCNPASALHTLNLTNNSLEDKGISALSAQL
AKLPMGLKHLNLSKTSISQKGVNSLAQALSANPAVPTTLTHLDLCGNSLRGDDLSNLYNF
LGQHNSLVTLDLSSSDCCLDQVCTSLLRGSLKHLSVLNMSKSVFSHRRSKDVPHSFKQFF
GTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQILEGCIAE
IPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDNLVHMIQ
EEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIRVDISGNGMGDMGAKMLAKALQINTK
LRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDALLKMEQY
LLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVVQEDMKVA
KNLMKDARNSKRLLPNLYHMRGSPGGMGSPIQDKLESMAGEIARVMDGQLKTLLQSMVDT
AEGLCPHVMKRSSLHQELMKAGAGRMTIPHSFITTTLLEQSGVDIINKISEVKLSMASFL
SDRIVDEILESLSRSQNTLAEHLTRKPQPLLHQEPNKMEVLEETVLQPEAQTQEQSPHHA
ERLEEMDTCVSKRKSILCRMLRPVSVAFEMEFDLDKALEEVPIYEEDPPPPAPSDKKPTY
FGELPTMEARKLEHHTKLRPKPKKRTKPSREPREPICTSPPPEVEQNDLLGKVDEGVDEF
FYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEKSHGTAAITAPA
AATVSTVTEEPLSPKAPLWDHSEISPDHSRKPPTPEPTEEQHSESDSKGSPHGGRHFGVP
VMGPLMGLDLLAEMRKMHEKIVSHKSDSSDKADDKKGKPKGQTSSIAPRSKPTGVTPRSP
APQSIKPHMGPHTLGPLSPRASSSHSPDDTPDSPLGNVSPKGPLPAPRLKREPSDYEREE
ESSHINVELTGDPSPFDLDQEMDRSAIGGRQWSSLKRSSSVVQEVEGRERTKSLPASVRP
SSTVDLVHCQSPGVFAKDNTEEDFSPTPDTDQRQNLRPDNMEDTMTTSQCRKKSYI
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagatacgggtattcctaaggagttgctggagagtctgagagatgccgtg
ggaaggaagatcaagctcaccctgaagaagaggttgaaactggaggtcaagggtgacaaa
ctggagaaccgagttctggctttggcatcccatcgggtctttctgcttactgcaagggtc
cctgccaagattgaacagaccttcaattacctagatatacaggggatcattagtaacaag
cccactcagttgttgttggagtatgaccgaggccagctgtccctgaagcttggctctgtg
gaggatgtggatgaggtggtggcccacattgggagctgtctacacagaatctgtccaggc
ctctccccagcgaaggcgatgaagaagttgaccctgaagcctcccgagaggacggccgcc
ctacagtctctctgggaggaccaggccaccacagacctagggccgtgtggtggtttctcc
cacatgtactggtgtctctgtgaccagctgggtctgccattcagagaggaggtgcagtgg
gatgtggacacaatctatcagacccaggacaccagggaactgaacctgcaggatttcgta
catcttgataaccgagatttggtggccatcattgtggtcctggagtataaccaatggttc
accaagctctccacaaaggactacaaactgtccacagatgtgtgtgaacaaattctgcga
gttgtgtcccgctccagtcgcttagaggagctggttttagagaatgcaggtctcagaagt
gatttcgtgcagaagctagccaacgctctgacctgcaaccctgcctctgcacttcacacc
ctcaaccttacaaacaactccctggaggacaagggcatatctgctctcagtgcacagctt
gccaaactcccaatgggtctcaagcatttgaacctttcaaagacctccatatcgcaaaaa
ggtgttaacagtctggctcaggcgctgagtgccaaccctgctgtccccactaccctcaca
cacctggacctctgtgggaactcactccgaggagacgacctctcaaatctctacaatttc
ctgggtcaacataacagtctagtaactctggatctgtccagcagtgactgctgtctggac
caagtctgcacttcacttctacgaggttctctcaagcacctctcagtactcaacatgtcg
aagagtgttttctctcacaggagaagtaaagatgtcccgcattccttcaagcagttcttt
ggcactgcactggcgctgagcagtgtcaacctgtctggaaccaagctccccctggaggca
ctcaaagcacttttactaggtcttggttgcaatcctaatctcagtgaagtatcactggat
ctcagcagctctgagctaagatctggaggctctcagattctggagggctgcatagctgag
attcccaacatctccagcctggacatctcagacaacggtttggattcagacctgaccact
ctcttggtgtggctggccaaaaatcgctccatccgccacctctcactgggcaagaacttc
aataacatcaaatccaaaaatttgtctcaagtcttggacaacctggtgcacatgatacag
gaggaggaatcgcccctgacgtccctctccctggccgactccaagctgaagggagatctg
tccatcgtgctgaacgctctgggcagcaacaccagcctgatccgggtggacatcagtgga
aacggcatgggagacatgggggccaagatgctggccaaggccctacagatcaacaccaag
ctccggacagttatgtgggacaaaaacaatgtcagcctacaaggcctccaggatgtggca
gctgctttagaaaagaaccacaccattcgcttcatgcctatccccatcatcgatgctgcc
caggccctcaaggccagccctgagaaaacagaggacgccctactaaagatggagcagtat
ctcctaaggaaccacgagactcgaaaatacctccaagagcaagcctaccggcttcagcaa
ggcattgtcacgacaaccacacaacagatgatggacatgatctgtgtaaaggtgcaggac
cacctgaactccctgaggtatacagagactgacgtcgtccaggaggacatgaaggtggct
aagaacctcatgaaggacgccagaaactccaaaagactgctgcccaacctgtaccacatg
aggggatctcctggtggcatgggcagccccattcaggacaagctagagtccatggccgga
gagatagccagggtcatggatggacagctaaagacgttgttgcagtctatggttgacacc
gctgagggcctctgtccccatgtgatgaagaggagcagcctgcaccaggagctgatgaag
gcaggtgcaggaaggatgaccatcccccatagcttcatcaccaccacactactggaacag
tcaggagtcgacatcatcaacaagatcagtgaagtgaagctcagtatggcttccttcctc
tcagaccgtatcgtggatgagatcttggaatctctgtcccgttcccaaaacactctggca
gaacacctgaccaggaaacctcaacctcttctccaccaggagcccaacaagatggaggtg
ctggaggagacagtcctccaacctgaggcccagacccaggagcagagtcctcaccatgct
gagaggctggaggagatggacacatgtgtgtccaagaggaagagcattctctgcaggatg
ctgcggcctgtatctgtggcctttgaaatggagtttgacttggacaaggccctggaagaa
gtgcctatatatgaggaagatccgccccctcctgccccatcggacaagaagccgacttac
tttggcgagctgcccactatggaggcccgaaagttagagcaccacaccaagctccgcccc
aaaccgaaaaagaggaccaaacctagccgagaaccacgggaaccaatctgcacctctcca
ccaccagaagtggagcagaatgacctcctggggaaagtggatgagggtgttgatgaattc
ttctacaagaaaatcaccaaacttagttttaaacgacccaccctgaggggctcctccaac
atccaggaggggtcggagaagaaacgggaatcccgtaaaagcggcttccttaacctcatc
aagtctcgcacctcgaaatctgagaagagccatggaacagctgccatcaccgccccagct
gctgcgactgtcagcactgtgacagaggagcccttgtcccccaaggctccgttgtgggac
cactctgaaatctcccctgaccactcacgaaagccaccaacccctgaacccactgaggaa
cagcactccgagagtgacagtaagggtagtcctcatggtggccggcactttggagtcccc
gtaatgggccccctaatgggattggacctcctggcggagatgagaaaaatgcatgagaaa
atagtctctcataagtcggactcttcagacaaggcagatgataaaaaaggaaagccaaag
ggtcaaacatcgtcgatagcgcccaggtctaaacccaccggtgttacacccagatcccca
gcaccccagagcatcaagccccacatgggaccacacactttgggacccctgagccctcgt
gccagcagcagccacagcccagatgacacccctgactcccctcttggaaacgtatcccca
aaaggaccactgcccgcccctcgcctgaagagagagccctcagactatgagagggaggag
gagagtagccacattaatgttgaactcacaggagaccccagcccatttgacttggaccaa
gagatggacaggtctgcaattggtgggagacagtggtcctccctgaagcgctccagttct
gtggtacaggaagtagaaggtcgagaacgcaccaagtccctccctgcatctgtgagacct
tcatccacggtggaccttgtccactgccaaagccctggggtgtttgctaaagacaacacc
gaagaggacttctctcctacccctgacacggaccaaagacagaatctcaggcctgacaac
atggaggacaccatgacgacatcccagtgtagaaagaaaagctacatctag
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