Oncorhynchus gorbuscha (pink salmon): 124043512
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Entry
124043512 CDS
T07892
Name
(RefSeq) SLIT and NTRK-like protein 5 isoform X1
KO
K25836
SLIT and NTRK-like protein 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124043512
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LRRNT
LapA_dom
Motif
Other DBs
NCBI-GeneID:
124043512
NCBI-ProteinID:
XP_046218140
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Position
LG01:complement(81473500..81481056)
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AA seq
897 aa
AA seq
DB search
MQCNAFWNCNWMTVHTSAAQQCEFGHRHRKMHLWIVIIFSVATSVSIVEMFDNYGEICRR
LCACEEKEGILTVSCESRGIVDLSEISHVYFTTYNLLLTGNLLKRLSANDFVEYNGLTIL
HLGNNDISEVESGAFNGLQGLKRLHLNNNKIDALKEDFFVGLDRLEYLQLDYNYITHVEP
NAFSKLRHLEVLILNDNLISTLPTNIFQYVPLTHLDLRGNQLKLLPYSGVLEHMDSVVEL
QLEENPWNCSCELIALKAWLESISYTALVGDVVCEFPFRLHGRDLDEVSKPELCPRRAIA
EYEMRPQAHQTTDADFRTTPASVTASFPSSAILRSSSRPTKGPRQSGKLKSKPTSRIPSN
KPQNYGQIVSYQTKSPVPLDCPTACTCNLQISDLGLNVNCQERKIERISDLNPKPYNPKK
MYLTGNYIPVVRTSDFIEATGLDLLHLGNNRIAHIHDRAFGDLTQLRRLYLNGNLIDRLT
VDMFYGLESLQFLYLEYNVIRDIVSNTFQHVPNLQLLFLNNNLLKTLPGEIFNGLKLARL
NLRNNHLRNLPVSGVLDQLTSLVQVDLFENPWDCRCSIVEMKMWLEQLSTGTVVNNVICG
SPKRLFGEDMRYIKTSHFCPNNSDTLASVIPPSEETIPGSTITIETSLDDEAHVNSVPLS
VMILALLLMFIVSVFVAAGLFAAVKKRRQKALNEQNNSMNACISSLNTEYGLYKKGSVPK
VRTSAGHVYEYIPPPTEHTCKSTVYSPSQSKSVDGYRDFDELNGAFLNNHLGEEAGSNAI
SSEYSISTPEPLNKQSPLQDNHQYYYRDVEPDKPSSYSNALPCRHTAHSSNQYTSDFDIR
HQYMHPERIQQTILYCTAPSTVYVEPNRSEYWELKAKLHIDPDYLEVLEKRTTFTQF
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtaacgccttttggaactgtaactggatgacagtgcatacttcggcggcccaa
cagtgtgagtttggccatcgacacaggaaaatgcatctctggattgtaattatattctcg
gtggctacctcggtgagcatcgttgaaatgtttgacaattatggagagatatgccgaaga
ttgtgtgcctgtgaggagaaagaggggatactgacagtaagctgtgaaagtagaggaatt
gtcgatctctctgaaataagccatgtgtacttcacaacctataatttactgctcaccggt
aaccttttgaagaggctctccgccaatgactttgttgaatacaatgggcttacaatattg
catctgggcaacaatgacatatccgaagttgaatcgggagcttttaatggacttcaggga
ttaaaaagattacatctcaacaataacaaaatcgatgccttgaaggaagatttttttgtt
ggccttgaccgtctggaatatcttcaactagactacaattacatcacccatgttgagcca
aatgccttcagcaaactgcgtcatctggaggtcctgattttaaatgacaacttaatttct
actcttcccactaacattttccaatatgtccctttgactcaccttgacctgagggggaat
caactgaaactgctgccatattcgggtgttttggaacacatggacagtgttgtggaatta
caactagaggagaacccatggaactgctcttgtgagctgattgctctaaaggcctggctc
gagagcatatcctacaccgctttagtgggtgatgtggtctgtgagtttccattccggctt
catgggagagatcttgatgaggtctctaaaccagaactgtgtcccaggagagctattgca
gagtatgagatgcgtccccaagcacatcagaccactgatgcagactttagaaccacacca
gcctcagtcacagcctcattcccatcctctgccatattaaggtcctcgtcaaggcccacc
aagggacctcgccagtcaggcaaactaaagtcaaaacccacgtctcgcatcccctccaat
aaaccgcaaaactacggtcaaatcgtttcatatcaaaccaaatcccctgtgcctttggac
tgtcctactgcctgtacttgcaatctccaaatttcagacctcggtctgaatgtcaactgc
caagagagaaagattgagcgcatctctgacttaaatcccaaaccctacaatcccaaaaag
atgtatctcacagggaattatatccctgtggtgcggacatcagatttcattgaagcaact
ggattagatttgcttcaccttggcaacaatcggattgctcacatccatgacagagccttt
ggggatttaacacagttacgcaggctgtacctgaatgggaatttgatcgaccgcctcaca
gtcgatatgttctatggattggagagcctgcagttcttatatttagaatacaatgtcatt
cgagacattgtgtcaaacacctttcagcatgtccccaaccttcagctgctcttcctgaat
aataacctcttgaagaccttacccggggaaatctttaatgggttgaaattggccagacta
aatcttcgcaataatcacctccgcaatctgcctgtcagtggcgtgctggatcagctgaca
tctctggtgcaggtagacttgttcgagaacccctgggactgccgctgttcaattgtggag
atgaagatgtggctggaacagctcagcacaggcacggttgtcaacaatgtcatctgtggc
tcccctaaaagactgtttggggaggatatgcgatacattaagacaagtcatttctgtccc
aataactccgatacccttgcctccgtgatcccgccctctgaagaaaccattcccggcagc
actatcaccatagaaacatcattagacgacgaagcacatgtcaacagtgttcctctatct
gttatgatcctcgccctgctcctgatgttcatcgtttcggtgtttgtcgctgcaggactg
tttgcggctgtgaagaagagacgtcagaaggctctaaatgagcagaataactccatgaac
gcgtgcatcagttcgctgaacacggagtacggtctttacaaaaagggatccgttccaaaa
gtcaggacgtctgcagggcatgtgtatgagtacatcccccctcccacagaacacacatgc
aagagtaccgtctatagcccaagccagagcaagtcagtggatgggtacagagactttgat
gagttgaatggggcgtttttgaataatcacttgggtgaagaggcgggtagtaacgcaata
agctctgaatacagtattagcactccagagccactcaacaaacagtcccccttacaagac
aatcatcagtattactacagagatgtagaacccgacaagccgtcatcttacagcaatgct
ttaccttgcaggcatactgcccattcctcaaatcagtatacgtccgacttcgatatcaga
caccaatacatgcacccagaaagaatacaacagacaatattatattgcacagcaccaagt
actgtttatgttgagcctaacaggagcgagtactgggaactgaaagccaagcttcatatt
gatcccgactaccttgaagttcttgagaaacgtacaacgttcacccagttttga
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