Oncorhynchus gorbuscha (pink salmon): 124043529
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Entry
124043529 CDS
T07892
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like
KO
K08525
retinoid X receptor beta
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320
PPAR signaling pathway
ogo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124043529
03320 PPAR signaling pathway
124043529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124043529
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124043529
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
124043529
Nuclear receptors [BR:
ogo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
124043529
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
124043529
NCBI-ProteinID:
XP_046218169
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All DBs
Position
LG09:38049789..38078157
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AA seq
469 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGLHSPPLTPTAAAMTSLPPFTSDVNSPTSSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLGGHSPGGPMLSQK
RLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRY
QKCLACGMKREVVQDERQRSVQEERQRNKERESEAESTSAVNEEMPVEKILEAEMAVEQK
TEVHADGTSEGSSPNDPVTNICQAADKQLFTLVEWAKKVPHFSELALDDQVILLRAGWNE
LLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSSSSEVELLREKVYASLESYCKQRYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattcccgcagcccagacagctcctctgtgtcctcccctccctcg
ggcctgcactcaccccccctgacccccacagctgccgccatgacgtctctgccgcccttc
acctcggacgtcaacagccccaccagcagcatgggctcgcccttctctgtcatcagctcc
tctttggggtcgccatgcctgcccgggacaccatcggtgggctacggccccattagcagc
ccccagatcaactccacagtgtccatgtcggggctgcacgcggtcagcagctcggacgac
gtgaagcctccgttcgggctggggggccacagcccagggggccccatgctctctcagaag
cgcctgtgtgccatctgcggcgaccgctcctccggtaagcactacggagtgtacagctgc
gaaggctgcaagggtttcttcaagcgcacggtgcgtaaagacctgagctacacctgccgg
gacaacaaggactgcctggtggacaagcgccagcgcaaccgctgccagtactgccgctac
cagaagtgcctggcctgtggcatgaagagggaagtggtccaagatgaacgacagagatcc
gtgcaggaagagcgccagaggaacaaggagcgggagagtgaggcggagtcgaccagcgcc
gtcaacgaggagatgcccgtggaaaagatcctggaggccgagatggccgtagagcagaag
accgaggtgcatgccgacgggacctccgagggcagctcgcccaacgacccggtcaccaac
atttgccaggctgcagacaagcagctgtttaccctggtggagtgggccaagaaggtcccc
cacttctctgagctggccctggacgaccaggtcatcctgctacgcgccggttggaacgag
ctgctgattgcctccttctctcaccgctccatcagcgtgaaagatggcatcctactggcc
accggcctgcatgtgcacaggaacagcgcccacagcgctggtgttggagccatcttcgac
agggagagtgcgcacaatgcagaggttggggccatatttgacagagttctcactgagcta
gtcagtaagatgagagacatgcagatggacaagaccgagctcgggtgcctccgagccatc
atcctcttcaacccggatgccaagggcctgtccagctccagtgaagtggaattgctgagg
gagaaggtgtacgcatcgctggagtcctattgtaaacagagataccccgaccagcagggc
aggttcgctaagctcctcctccggctgccagcgctacgctccattggcctgaagtgcctg
gagcacctgttcttcttcaagctgattggtgacacccctatcgacacattcctcatggag
atgctggaggcgccccaccagctgacctag
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