Oncorhynchus gorbuscha (pink salmon): 124043553
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Entry
124043553 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124043553
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124043553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
124043553
NCBI-ProteinID:
XP_046218206
LinkDB
All DBs
Position
LG09:38660346..38695020
Genome browser
AA seq
2561 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGAVDSGEKRDSDENRDQSPKSQTPPQTSSHSESSQEE
SMTLTARATPEREVHREGPQLPETAAAAAGSLPGKSEDSRPGSVKSMSAHSTDSSSSAAS
AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAASNHGYHGNPGTPPLNSSSAHCGS
NTGSQSSGLSSGPGSTASEGGLLTDINSQTRRPLEDYITTKAPPQDRDNTPGPPPTGDRD
RRGPEGGREISPSPVRCSSTDTASEHDPDVSDLRRPNFPHTNPNTETHTLDLVQRGTPRT
PTPQSLSDALADALAKGLKNQRVLARQARRRTGKWEEENGRGVGRESMDSVFRAGVVRRV
SGEHGSLEVQLNGEKELYRYPFREGPQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDG
GTTEAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRAPPGDEEGDGRVGTPTAVWVSRQSL
RLLVPPWDLDLGPSGGGREEGDAAAERGREREREREDREEIEVEPELCFLSHGMGLSAAV
AGSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVPGRDWEREKDLVERERELQRKQER
DNRERAKQHHHFMPLTPEEDIEVSHFSMVPMGAAGGAAKALAVSQHRHILSKPPPGYLSP
HLSVVRGLGGTPLVGPHLALNPHPPASPTVLMGLESGALSAGAAIIATTQLPLPSSSSRG
SLDKPPSSNTNSHGASGGGGGSGLASSSRSRTPLTVAQQKYKKGDVVCTPTGIRKKFNGK
QWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRLGGG
RTSSEFDWDNTSRDSSEASSRGGDSRPRMVLPSFLPQDLSHFDFDECEAATMLVSLGSSR
SGTPSFSPISNQSPFSPTPSPSPSPLLSFRPATFSPITAPPSLTPRRHRHLSGTKMSTPG
SEREHHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLPDQQLGGDYRAPASRLQGAF
PSXSQPTTPSSLSFPRPWSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPRRIVPLRDS
PVIVRNPDVPLAKFTEGPLGRRGGGGCSSRDHSQPLHLATGLQAPVPINGAVTNGAVLMR
NPASTLVLVTSSQSLTPAVTGRPVHSSPAPSGGSASMSSTGSALSSSGSGGREWERKSGG
HQDAIGGTLPQPVACHPSPTALLPLILPAESPQPAPRKDIIMGRPGTVWTNVEPRSVPVF
PWHSLVPFLEPSQSSAAAQPTDGQQLVNQSNEPRCGVALVSDGRMGPPDAGPGSPSRPPP
SSNDNNPQAERAERGGADSETESDADDPFFPGVANDPAPSTGTMKRRTQSLSALPKDGDR
KREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPQEKQKYHDLA
FQVKEAHFRAHPDWKWCNKDRRKSISEGRGTPGAKEARERSMSESAEPESVSQGMELKGT
AGPGWPGGSEHHVGDYSGQLPRTRAFSYSAVHSLERRERARDVEKLCLEETGSFHSHPPT
LSLAQCGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDGQQ
AFQPVVRSSLPSSNNTSHADSHSDSTKGDTKGSAGESSERKRKRGMEGGEEGSGESKRGR
GGGGHVPSNSIPGSAPITSTPSLGYGLTQVLGAVRMAPTVVTNMVCPITSMPIPIASKPL
EGSIALSALPGEKKAMLLIGGPGAGGRPFTAGGGYLSSSSSNPVSVGPGGLQVTSLVLDG
AFPNQSIKLIAPSQPLLSSTHSTLPFPLPLLQPQFLPAGSLTPPGGANPGLTQVQYILPT
LSSVSTNPKTPSPQLTQQPTGIRTLPSTPPTHVSLANGIHSGAGVEIRYATVGGVSPGER
VQAQSPVLQSKMMVPMATVRTGSTPPQPSCLVAPPLPVQNGALLGSKIIQIAPMPMVQTN
VHSAGAVLPGSPFPVSMATATVMTSGITPPQTVLLTSPPTRITYVQSGTGGVSTATGQAP
PSSGPAYLPSSLTTLGFTAIAPAGQALVHPLVAGQPPWLAPALSPGAPGTGRQLLTAIYP
DQNVTLAPDGVSMTSVPPNLAQEVSGQSSRSAVGVQGSGDVTLSHEEGMPHLTAEMEHKP
QVEGQAQRKTKTHIKKESIKKEKMTEDVEAHSKPGANSMGTSSSNTPTGSEENGGRASHV
KEENTDDARDYAKEKQTDVDGERERWIKMECGTPEPERSRETDDWPHEGHNKGDSGNEGH
SKGAGPREPSHPTTGQDTPPPAPQTDRDAPPSAKKTKFRPPPLRKPSDSIDKVLSGSYFE
ERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKTAA
RSRLSSCSSEPNTPKSDVKCEGDIFTFDRAVAESEDVLGEMDRVPYSSLRRTLDQRRALV
MQLFQEHGFFPSAQATAAFQARYSDTFPSKGCLQLKIREVRQKIMQTATPGTPGISEPGG
STTDSTSVANGSSNTNTRDGTGTEPGERGRSPEEPRSLGKL
NT seq
7686 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattaaaaagcaaggaaggcgctcgcccccgtcgacccgggccaaaggtggg
aagagacgcggggcggtggacagtggggagaaaagagactcggacgagaacagagaccaa
tcccctaaaagtcagaccccaccccaaacctcatctcactcagagtcttctcaggaagag
tcgatgacacttacggctagggccacgccagagagggaggtccacagagaggggccccag
ctcccagagacagcggccgcagcagcagggtccctccctgggaagtcagaggactcccgc
ccggggagtgtcaagtcgatgagcgcccacagcacagacagcagcagcagcgccgccagt
gctgccaacagccccaacccctcatccaaccgcaagacagccaccttcaaggcccgcgtc
cccaagaagaagtacacctctgagcactgtgctgctgcagctgctgccgccagcaaccac
ggataccatggcaaccccggcacgcccccactgaacagcagtagtgctcactgtggtagt
aacaccggtagtcagtcgtcgggcttatcttcggggcccgggtcgacggcgagtgagggc
ggtttgcttactgacatcaacagtcagaccaggagaccactggaggactacattaccact
aaagctccaccacaggacagggacaacacacctggaccccctcccacaggggacagagac
aggagaggcccagagggaggcagagaaatctcccccagccctgtccgctgctcctctaca
gacacagccagcgaacacgaccctgacgtgagcgatctacgccgccccaactttccccac
accaaccccaacaccgaaacacacacactggacctggtgcaacgtggcaccccacgcact
ccgaccccacagagcctgtcggacgcgctagccgacgccctggcaaaaggtctaaagaac
cagcgggtgctagccagacaggctaggaggagaactggaaagtgggaagaggagaatgga
aggggagtggggagggagagcatggactcggtgttccgagcgggtgtggtgcggcgggtg
agcggcgagcacggcagcctggaggtgcagctgaacggcgagaaggagctgtaccgctac
ccgtttcgcgagggcccccaggggcccgtggacatcatcatggacgccccgccgcccggc
tcccaggccgtgcccatcggcacccctgtgtgcgtgcccttcggaggcaacgaggacggc
ggcaccacagaggcccagcgccaatggtaccgagagggcctggtcacccaggtggactcc
cacccggctgtgtcctacccctatagagtgttgttagaggacagagcgcccccaggggat
gaggagggggatggcagggtgggcactccgaccgctgtgtgggtgtcccgtcagagcctc
cgcctgctggtgcccccctgggacctggacctgggaccctccggaggggggcgagaggag
ggcgatgctgctgccgagagggggagagagagggagagagaaagagaggacagggaagaa
atagaagtggagccagagctgtgtttcctcagccatgggatggggctcagcgcagctgtg
gctgggtctgtgttggggaggctttcataccctggaacggcccccgcctcctcgtcttcc
tccactgtcagctcccccgtcacccctgcctcggtgctgagtctggtgcccggaagagac
tgggagcgagagaaggacctggtggagagagagcgggagctccagaggaaacaagagaga
gataaccgagagagggccaagcagcatcaccacttcatgcccctgaccccagaggaggac
atagaggtgtcccacttcagcatggtgcccatgggggcggcgggaggtgcggccaaggcc
ctggcggtgtcccaacacaggcacatactctccaagccgcccccgggctacctcagcccc
cacctgtccgtggtccggggcctcggaggcaccccgctggtgggcccccacttggccctc
aacccccacccccctgcctcccccacagtgctaatgggcctggagtcgggagccctgtca
gcgggggcggccatcatcgccaccactcagctcccactgccctcctcgtcctcccgcggc
tccctggataagccaccctcgtcaaacaccaactcccacggtgcatctggagggggtgga
ggctcgggtttggcgtcctcgtcgcgctcccgcacccctctcacggtggcccagcagaag
tacaagaagggcgacgtggtgtgtacccccacgggcatccgcaagaagttcaacggcaag
cagtggaggaggctgtgctccagagagggctgctctaaggagtcccagagaagaggctac
tgctcgcgtcatctctccatgagaactaaagagatggaggccagcggagggggcagagac
cgtggcggggccagcagtacgggcaccctaaccccgtcagacctgaggctgggtggtggc
cggaccagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcgagcagt
aggggaggggattcacgcccccgcatggtcctgccctcattcctgccccaggacctatca
cacttcgactttgatgagtgcgaggcggccaccatgctggtgtctctgggcagctcccgc
tcgggcacgccctccttctctcctatctccaaccaatcgcccttctcgcccacgccgtcg
ccctctccatccccgctcctcagcttccgcccggccaccttcagccccatcacggccccg
ccttctctcacccctcgccgccaccgccatctgagcgggactaagatgagcacgccgggc
tcggagcgcgagcatcacctgtcgggcatcgtacccaccttccagaccaacctcaccttc
accgtgcctatgagccccagcaagcggaaactggatgcccttcctccgccactgcccctc
cccgaccagcaactagggggagactatagggctccggccagccgccttcagggtgctttc
ccctcanngagccagcccaccaccccctcctcgctctccttcccccggccctggagcgcc
actagccgacccccgtcctccgctgcctccacccctccgcccatgctggtgtcccccacc
cctccctccccactgccccaggaccccagcccccgccgcatcgtgcccctgcgagactcc
cccgtcatcgtgaggaaccccgacgtccccctggccaagtttacagagggacccttaggg
aggaggggaggagggggctgctcctcaagagaccacagccagcccctgcatcttgccacc
ggcctccaagcacccgtgcccatcaacggcgccgtcaccaatggagcggtcctcatgcga
aaccccgcctccaccctggtccttgtaacctcctcccagtccctgaccccagccgtcacg
ggacgccctgtccactccagcccagcccccagtggtggctccgcctcaatgtcctctact
ggctccgccctctctagctctggatcaggcggtagggagtgggagaggaagtctggaggg
catcaggacgccattggagggacactgccccagccggtagcctgccacccctcacccact
gccctgctgcccctcatcctaccagccgagtcccctcaacctgcaccccgcaaggacatc
atcatgggacggcccgggacagtatggaccaatgtggagccccggtcagtgccagtgttt
ccttggcattcattggtccctttcctggagcccagccaatcgagtgcggctgcccagccc
actgatggccaacagcttgtcaatcagagcaacgagcctcgttgtggggtggccctagtg
agtgacggacggatgggcccaccagatgcaggaccagggtctccatcccgcccaccgccc
tcctccaatgacaacaacccccaagctgaaagagcagaaagaggcggagccgacagcgag
acggagagcgatgcagatgacccgttctttccgggtgtagcaaatgatcctgccccgtct
acaggcactatgaagaggcggactcagtccctcagtgctcttccaaaagatggagacaga
aagagggaaaaggaccacattcggcggccaatgaacgcgttcatgatctttagcaagcgt
caccgggcgctcgtgcaccagaggcaccccaaccaggacaaccgcacggtcagcaagatc
ctgggcgagtggtggtacgccctggggccacaagagaagcagaagtaccacgacctcgcc
tttcaggtgaaggaggctcacttcagggcccacccagactggaagtggtgcaacaaggac
aggaggaagtctatctctgagggccgagggaccccgggggccaaagaggcacgcgagagg
agcatgtcggagagcgcagagcccgagtcagtgtctcagggcatggagttgaagggtacg
gcaggcccgggctggcctgggggttctgagcatcatgtgggggactacagtggccagctc
cctcgcacccgtgccttctcctatagtgcagtacacagcctggagaggagggagcgtgcc
agagatgtggagaagttgtgcctagaagagaccggctcgttccacagccacccccctact
ctctccctggcacagtgtggggccagcgaggacgtgaccagcgacgaggagcgcatggtt
atctgtgaggaagagggggacgatgatgtcatggaggactcgtgccctgaaggatccata
gacctcaagtgtaaagagagagtgactgacagtgacgaggatgagccggatggacagcaa
gccttccagccagtggtccgttcctctctcccctcctccaacaacacctcccacgctgac
tcccactccgactctaccaagggggacacaaaggggagcgccggagagagctctgagagg
aagagaaaacgagggatggagggaggagaagagggaagtggagaatcaaaaagaggaagg
ggtggagggggtcacgttccttctaattccatccctggatcggcgcccatcacctcgacc
ccttctctgggttatggactcacccaagtgctcggtgcagtccggatggcccccaccgtg
gtgaccaacatggtatgccccattaccagcatgcccatccccatcgccagcaagccattg
gaaggctccattgccctcagtgccctgcctggggagaagaaagccatgcttctgattgga
ggaccgggagcaggcggcaggcctttcacagcagggggtgggtacttgtcctcgtcctct
tcaaatcccgtgagtgtggggccgggggggctgcaggtcaccagtctagtgctggacggt
gctttccccaaccagtctataaagcttatagccccgtctcagcctctcttaagctccacc
cacagcaccctacctttccccctccccctgctgcagccccagttccttcctgccggttct
ctcaccccccctggcggtgccaaccctggcctcacccaggtgcagtatatcctgcccacc
ctgtcatctgtcagcaccaaccccaagaccccctccccccagctaacccagcagccaacc
ggcatccgcacgctgccctccactccgcccacacatgtctccctggccaatggaatacat
tcgggggcaggagtggaaataagatatgccacagtgggaggggtcagccctggagaaaga
gtccaagcccagtctccagtcttgcagagcaagatgatggttcccatggcaacagtgaga
actggctctactcctcctcagcccagctgcctggtggctcctccccttcctgtgcaaaat
ggtgctctactaggaagcaagattatccagatcgcccccatgccgatggtccagacaaat
gtccactctgctggagcagtgcttcctgggagtcccttccctgtatccatggcaacagcc
acggtgatgacttcgggcatcacaccccctcagaccgtgttgctaacctcgcctccaaca
aggatcacttatgtccaatcaggcaccggtggggtctccacggcaacaggccaggcccct
ccctcttcaggccccgcctacctgccatcgtccctgactaccctgggcttcaccgccatc
gccccggctggccaagcccttgtgcaccctctcgtagcaggccaaccaccctggctagcc
ccagccctttcccctggagccccggggactggacgtcaactcctcaccgccatttacccg
gaccagaacgtcaccctggcgccagatggggtttccatgacctctgtgccccccaatttg
gctcaagaagtgtccggccaatcatcacgctcagctgtcggcgtccagggttcgggggac
gtgaccctgtcacatgaagagggaatgccacacctgactgcagagatggagcacaagcca
caggtggagggccaggcccaaaggaagaccaagacacatataaagaaagagagcataaag
aaagaaaagatgacagaggatgtcgaggcacatagcaaacccggtgctaactcaatgggt
acgtccagcagcaacacaccaacagggagtgaagaaaatggtggtcgagccagccacgtg
aaagaagagaacacggacgatgccagagattatgccaaagagaaacagacagacgtggat
ggagagagggagaggtggataaagatggaatgtgggacacctgaaccagagaggtccagg
gagacggatgattggccccatgagggccacaacaaaggggacagtggcaacgagggccac
agcaaaggggctggaccgagggaaccttcccaccctactacaggacaggacactcctccg
cctgccccacagactgacagggacgcacccccctcagccaagaagaccaaattccgccct
cctccactcagaaagccctccgactccattgacaaggtcctgtcggggtcctatttcgag
gagcgctttgccgagctgccagagttcagaccagaagaggtgctgccctctcccaccctc
cagagtctggccacttccccccgagccatactgggcagctaccggaagaagaggaggaac
tccacagacctggactcgtctgcagaggaccccagctctcccaggaggaagactgcagct
cggagccgtctctccagctgcagctcggagcccaacacacccaagagcgacgtcaagtgt
gagggggacatcttcacctttgacagagctgttgctgagtctgaggatgtcttgggagag
atggacagagtgccgtactcctctctccggaggactctggaccagcgcagggctcttgtc
atgcagctcttccaggaacacgggttcttcccttcagcccaggccactgcagccttccag
gcacgctactcagacacctttccctccaaggggtgtctgcagctgaagatcagggaagtg
aggcagaagatcatgcagacagccacacctggaacccctggaatctctgagcccggcggg
tcaacaacagactccacctccgtcgccaacggctcctcaaatactaacactcgagatggt
acagggacggagcccggagaaagagggaggagtcccgaggagcccaggagtttgggtaaa
ttgtag
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integrated database retrieval system
