Oncorhynchus gorbuscha (pink salmon): 124043557
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Entry
124043557 CDS
T07892
Name
(RefSeq) glutamate receptor ionotropic, kainate 5-like isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04080
Neuroactive ligand-receptor interaction
ogo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124043557
04082 Neuroactive ligand signaling
124043557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124043557
Ion channels [BR:
ogo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124043557
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
124043557
NCBI-ProteinID:
XP_046218217
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All DBs
Position
LG09:38775747..38875692
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AA seq
1078 aa
AA seq
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MPALPALLLSIYFLFLLLTMAPLSFTQAPALSSVRMAAILDDQSVCGRGERLALALAREN
INSVFEGPSRARVEVDIFELQKDSQYETTDTMCQILPKGVVSVIGPASSPASGSTVSHIC
GEKEIPHVKIGPEETPKLPYLRFASVSLYPSNEDLSLAIGAILRSFSYPTASLICAKAEC
LLRLEELVRRFLISRETLSVRMLDESLDPTPLLKEIRDDKVATIIIDANASISYLILQKA
SELGMTSAFYKYILTTMDFPLLRLDDVVDDQSNIVGFSMFNSSHPFYLEFIRSLNLSWRE
GCELSPYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTTPQIWQHGTSLMNYL
RMVEYDGLTGRVEFNSKGQRTNYTLRILEKHHGGHKEIGIWYSNNTLAMNSTSLDINMSE
TLANKTLIVTTILENPYVMHKSNYQELQGNDRYQGFCVDMLRELSDMLKFSFRIKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMSLGISILYRVNLG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLMGRKDMLENQY
TLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIQYGTIQGGSTMTFFMNSRYQTYQRMWNYMHSKQPSVFVKSTEEGIA
RVVNSKYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFKEEITLGVLQLA
ENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RRSAETDEVRPHCCPGQNHKHPPMSVCHEMLTEFRNAISCKKTSRSRRRRPLASTGGVLR
HPTRLQLGVPRPIRLVREMRLSNGKLYSGSGPLTGGGGAAGGACGAVGGGPSDMGPGPQR
LLEDHLGANTTPPPPPPAAATAPPSRSCAHVRICQECRRIQNLRSASSFSRIPPHLGPHS
SLSLPRLPPPPPPSSTDSDGGGCDTVSPRRPKPKPTPPPRPLPPAKTPTTDLLLGKQD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcgctgctgctgtcgatttacttcctcttcctgttgctgaccatg
gccccgctctctttcacccaggctcccgccctctcctctgtcagaatggcggctattttg
gacgaccagtcggtgtgtggtcgaggggagcggctggcgctggctctggccagggagaat
atcaacagtgtgtttgagggcccgtccagagcccgggtggaggtggatatcttcgagctg
cagaaggactcccagtacgagaccaccgataccatgtgtcagatattgccgaagggggtg
gtctctgtgattggccccgcatccagtcccgcctcaggctcaactgtcagtcacatctgt
ggggagaaggagatccctcatgtgaagataggcccggaggagacgcccaaactcccatac
ctccgcttcgcctcggtcagcctctaccccagcaatgaggacctgagcctggctataggg
gccatcctccgctccttcagctaccccaccgccagcctcatctgcgccaaggcagagtgc
ctgctgcgattggaggagctggtgcggcgcttcctgatctcccgggaaacgttgtccgtc
aggatgctggacgaaagcctggaccccacccccttgctgaaggagatcagagacgacaaa
gtggccactatcatcatcgacgccaatgcctccatctcctacctcatcctccagaaggca
tcggagctggggatgacgtcagcattttacaagtacatcctcaccaccatggactttccc
ctgctgcgattggacgacgtggtggatgaccagtccaacatcgtgggtttctccatgttc
aacagcagccatcccttctacctggagttcatcaggagtctcaacctgtcctggagggag
ggctgtgaactcagcccctaccccggcccagcgctgtcgtcggctctcatgtttgatgcg
gtgcatgtggtggtgggggcagtgcgtgagctcaaccggagtcaggagattggagtgaag
ccactcagctgcaccactcctcaaatctggcagcacggcaccagcctgatgaactacctg
cgcatggtggagtatgatgggttgaccggcagggtggagtttaacagcaaaggccagagg
acaaactataccctgaggatcctggagaagcaccatgggggtcataaagagattggaatc
tggtactctaacaacacgttggcgatgaactcgacgtccctggacatcaacatgtcggag
acgttggctaacaagacgctcatcgtcaccaccatattggagaacccatatgtgatgcat
aagtccaactaccaggagctgcagggaaacgaccggtaccagggcttctgtgtggacatg
ctaagagagctgtcagacatgttgaagttctccttcaggatcaagctggtggatgacggt
ctgtacggagcgcctgaaccaaatggttcctggacaggcatggtgggagagctcatcaat
aggaaagcagacttggcggtagctgggttcaccatcacctcagagagggagaaggtcata
gatttctccaaacccttcatgtctctgggcatcagcatcctgtacagagtcaatttggga
cggaagccaggttatttctccttcctggacccgttctctccagccgtgtggctcttcatg
ctgctggcctacctggctgtcagctgtgtgctcttcctagccgccaggttgagtccctat
gagtggtacaaccctcacccgtgtctgatggggcgcaaggacatgctggagaaccagtac
accctgggcaacagcctgtggttccccgtgggaggcttcatgcagcagggctctgagatt
atgccccgcgccctgtccacacgctgcgtctccggggtctggtgggcgttcactctaatc
atcatctcctcctacacggccaacctggcagctttccttacagttcagaggatggaggtg
cctatcgagtctcctgacgacctggctgaccagaccaacatccagtatggtaccatccaa
ggaggctccaccatgaccttcttcatgaactcgcgctaccagacgtaccagcgcatgtgg
aactacatgcactccaagcagcccagtgtatttgtgaagagcacagaagaaggcatcgcc
cgcgtggtcaactctaaatacgccttcctgctggagagcaccatgaacgagtaccaccgc
cgcctcaactgtaatctcacccaaataggaggtctgctcgacaccaagggctacggcatt
ggcatgcccctgggctcaccgtttaaagaggagatcactctgggggtgttgcagctggca
gagaacaacagactggagatcctgaagaggaggtggtgggagggggggcagtgccctaag
gaggaggaccaccgagccaagggtctgggcatggagaacatcgggggcatcttcgtggtg
ttgatctgcggcctcatcatcgccgtgttcgtggccatcatggagtttgtctggtccacc
cgccgctcggcagagacagacgaggtacgccctcactgctgccccggccaaaaccacaaa
caccctccaatgtcagtgtgtcacgagatgctgaccgagttccgcaacgccatctcctgt
aagaagacctcacgctctcggcggcgccggcccttggccagcactggcggtgtcctgcgc
caccccacccgcctccagctgggtgtcccaagacccatccgcctagtccgcgagatgcgt
ctcagcaacggcaagctctacagtggctcgggccccctgacaggcggagggggagcagca
gggggagcgtgcggggccgtaggaggggggccctcagacatgggcccggggccacagcgc
ctcctggaggaccatctgggcgccaacactacgccgccgcctcccccgcccgctgctgcc
acggcgccaccctcccggagctgtgcccacgtgcggatctgccaggagtgccggcgcatc
cagaacctgaggtcggcatcgtccttctcacgcatcccgccccacctcggcccacactct
tctctgtccctgccccgcctcccgccacccccacctccctcctccaccgacagcgatggg
ggtggctgcgacacggtgagccccaggcggcccaaacctaagcccacaccccctccgcgg
cccttacccccggccaagacgcccaccacagacctgctgcttgggaaacaagactga
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