Oncorhynchus gorbuscha (pink salmon): 124043621
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Entry
124043621 CDS
T07892
Name
(RefSeq) elongation factor 1-alpha, oocyte form-like
KO
K03231
elongation factor 1-alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124043621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124043621
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124043621
03012 Translation factors [BR:
ogo03012
]
124043621
04131 Membrane trafficking [BR:
ogo04131
]
124043621
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124043621
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124043621
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124043621
Translation factors [BR:
ogo03012
]
Eukaryotic type
Elongation factors
124043621
Membrane trafficking [BR:
ogo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124043621
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
124043621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
124043621
NCBI-ProteinID:
XP_046218349
LinkDB
All DBs
Position
LG09:complement(40439557..40443388)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVTTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMAWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacattaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccacaggccatctgatctacaagtgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagcagctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggtatcaccatcgacatttctctgtggaagttt
gagaccggcaggtactacgtcacaatcattgatgcccctggacacagagatttcatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggttgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaatggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggcgtcaacaagatggattctactgagccc
ccctacagccagaagcggtttgaagagatccagaaggaggtcaccacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggttggcatggggacaac
atgctggaagccagcgccaatatggcctggttcaagggatggaaggtcgaacgtaaggat
ggtaacgccaacggtgtgactctgctagaggccctggactcaatcctgcccccttcccgc
cccacagataagccccttcgtctgcccctccaggatgtctacaaaattggtggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
tcggccatgcccggtgacaatgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaaaaacgaccccccaatggaggctggcaccttc
accgctcaggtcatcatcctgaaccaccccggccagatctcccagggctatgcccctgta
ctggattgccacactgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggatgcccccaagttcctgaagtctggagacgctgcc
atcgttgacatgatccccggcaagcccatgtgtgtggagagcttccaggaataccctcct
cttggtcgttttgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggcc
gtcgacaagaaggctgcctccagcggcaaggtcaccaaatctgccgttaaggctggtaaa
aagtga
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