KEGG   Oncorhynchus gorbuscha (pink salmon): 124043985
Entry
124043985         CDS       T07892                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ogo03032]
    124043985 (rif1)
DNA replication proteins [BR:ogo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124043985 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 124043985
NCBI-ProteinID: XP_046219170
LinkDB
Position
LG09:67442691..67473646
AA seq 2557 aa
MMAMVPPTSSGLLPLLESLEDSTAGQPEQTEAYLTIANRLSGDDGTQFLPAVIKHFPRLG
KTFQTHISSQNAELSQAALQALGFCVFHVHVVSAISANFAEEILSALSSLVVKSTDKNTC
TRALWVISKQNFPTEVVAKKVPEILRALECVRTRDDIQSVVLEHESLNVVISLLEQASAQ
MGEDAVQWAKLVIPLVVHSASKVRLRAAAALEMGLPLLLEKQKEVAAILEPLMSSKLIPE
LQKLFSTKNETNVLKLWPLFVRLLGKLLHRGGPFINSLLGLEELGFRSSSPNIKKIAFIA
WKSLIDNFALNPEILCSAKRLKLLLQPLSSIQVRTEALLLTKLEVWWYLVVKLGANLPAH
FEQVGVPLLQCTLGPDSALPATPSRSSSQCSAVGTTTPKSGSPAFSGTMVPRLNLNTSVV
VAQAYPSIQLLGLEMLLHYFLGSEVTTAAAKNKLTLSLEPISHPFLSSPFSFTKHAPLLI
TAVHDSFICIGKDAPDALLSLIWKNLVRFVSTTIDAAGNKKERQGSEVLTLLLQALQGII
FSEALPANRALSLLELTVKGIPQRVLGSASYQVAKMDVLNGTPALFLILLFYNHSLVAGF
VEDERFFLCLETLVSCGLSGPTSPLAFGEAVLAVVGRSAGTLENKEQLWRMWSLVVNPLT
DTITQTNEVNQGDALEHNFSAVLTALMFPIIHLLPGKVLLQMTQKSMLSTWCRLYKVFAR
CSALVATAEENVCCEELCVKMAAILDRKALKVPATLHAVANILLVIAESADFSPYTPQFQ
QKMKSPHTHLTWVRKKSKALGNLYTFQTLLVQSLETFNALEAPETAPNGTGLALVSILSI
LFSNLSLGTAIQEALASLSHPLVALYEQAGRTPNEQRKCTSSLGAKLEKLLSDVLGCLQI
RSALAYDDELLSLLSPLLCVLFLHRRKQVRSLATQFWNATFANTLVLVYPEELKPVLSQV
KQNTPIILPGFQSVEVPDELSGQYSSESSQLGTKLSGVQVTSVVKRDSLLPRAEEIKDRN
FKTSTKPIPTKLDFGSHKLPRREELEEQASIDFVFIPPETKERVLTEHQKEVKRTKRVDI
PAMYNNLDASLDTTVFTQYTQSQEESLDKLPADEQAEDAAKDEVKAEGNVERDEASEVLA
KDTQEYISPTNEMAEPTMEEEPPEEVLPESADVSMEDANEDVPLEDSDVAMESREEGTSP
IVSGGSDIISGTPKKHNSRRQSFITLEKYAEGKPASPASVVRFTGPLTRTLNSQEQEPAS
QKPSAEIEADTDRQDSQETEQVRHKSSRSESFLKEGEEHESSENKKESEVEIIAEKQSSE
TTEDDVIPDTQTQVEVLKEVPVPAVEEVLGNNSQEEEESKGLLEDSTSSQSTLSQGEPRR
SGRRRSRPLRPGEDTEERNDLDKQRKKSQPGEDVSQTDSPKTTPSLASPTHSQSQSRASR
RSKLAVEDDGEKDKLRKRSHKEVSELSQSNSQLATPSPAGDSNSLSQGWRSNKLVRESKE
LVKDKQKRRGVAKEELSQSDSLTVTASDNDSQSQSRLSQRSTLAVEVEDDGNKKRKGGRA
QKEKPSQTNSHVAKPSQLESQSQGRTSRSKAVSDSDKVEKQDPTEEEQSQRDSQMATLSP
DAQAGDEQSQGISSGRSKLVTQSEEQGKDKQRRVGTENTLSQIDSKITTPSATPNDSQSQ
GRTSRKSKVPLEVAELEDKTSPNVATDSAAAPEMSQTDSQVTPSATRQTESQPRLRGRSS
KRSKLEEQLKASSSPMPTPLETHSSQVADQAGTQQSPQGGRTTRRRASQGLLSSNLESDT
SETREDAQKPKKRGRNPKSTEDLQSPLATVGSGEPGAYVEIPMDLSESSLKSESEKSDLQ
NPLSEGLEVKIPQDVDETIKSINSLKPVMDVLKLPLITKNNMGQREDNTEMVDIEGECEN
TKLPSQLIDSSFKSDLEQLKSQHFCISPRKNLKTVSSQEGVHSDFGCEGPTPLQNKLLTD
SEQANSPVPSADGNSFSGYESVLLEPNKLFTPPISNGLPTDTSPSEAAEEKLSLSLQVAE
SSGEKLVDVPKPVTVSSEEVTEEHMGEDKENRHPESTNNVLEEDQPEEDVFMSLVHTKPE
GFNALDEEQQEEQYTCIKEGQPESDNTSTRTRENDTEPQVNDVQDITPLQERAKMDTVPS
LECEEEDGEETQLDNNDLALHPLDSVAPLTFDTREAPVPLHHPSTSKDVLCQDSPPKQKG
LEAMMGLEVGQSPSSGRIKGMWTPSASPSTSILKKGQKRPIEEEISSPFTKSRRVSFADP
IQHQELADDIDRRSPVIRSSSPRAKTASSSITQPKYITTPTKGLMICSPRNLRSPGYKSS
KKCLISEMSQEPRPIPKDCVYPALVSCSAPVEAVLPQITSNMWPRGFGHLVRARNIKTVG
DLSALTPSEIKNLPIRSPKISNVKTALKTYHEQQRKGRSDELKSFEEMENMTSELEEPTL
PQNQEEENTPGEALATEMLDEPVSMEQGPGERPDHQRPEGDLLLEVESLGARLAGEELSR
CSPDQLVQLHDQLGRMMKNVVVQLQGRLLSQNKDSGP
NT seq 7674 nt   +upstreamnt  +downstreamnt
atgatggcgatggtgcctcctaccagctcaggtctccttcctctgctggaatctctggag
gatagcacagctggacaaccggagcagactgaagcctacctcactattgccaatcgtctc
agtggagatgatggaacgcaattcctccctgcagtaataaagcactttccacgtttgggt
aaaactttccagacccatatctccagtcagaatgcagagctgagccaagctgccctgcag
gccctggggttctgtgtgtttcatgtccacgttgtctctgctatctcagctaattttgca
gaggagatattgtcagcactttcctctctggtggtgaagtccacagacaagaacacatgc
acacgagcattatgggtaatttccaaacagaacttccctacagaggtggtggccaagaag
gttccagagatcctgagggccctggagtgtgtgcggacgagagatgacatccagtctgta
gttttggagcacgagtctctgaatgttgtcataagtttgttggagcaggcctcggcccag
atgggtgaggatgcagtacagtgggccaagctggtcatccccctggtggtccactctgcc
tctaaggtgcgcctgcgggcggcagcagccctggagatgggcctgcctctacttctggag
aaacagaaggaggtggctgccatcctagaacctctcatgtcctcaaaactcatcccagag
ctccagaaactgttctccacgaagaacgagaccaacgtgctgaaactctggccgttgttt
gtcaggctcctggggaagctgctccatagaggtggtcccttcatcaactccctgcttggc
ctggaggaactgggcttccgtagctcctccccaaacatcaagaaaatcgccttcatcgct
tggaagagcctgattgacaatttcgcgctaaacccagagatcctgtgcagtgccaagcgt
ctaaagttgctgctgcagcccctcagctccatccaggtgaggactgaggccctgctgctc
accaagctggaggtctggtggtacctggtggtcaaactgggagccaacctgcccgcacac
tttgaacaggttggtgttcctctcctccagtgcaccctgggcccggactcggccctgcca
gccactccttccaggagctccagccagtgcagtgctgtggggaccactactcctaaatct
ggttccccagcgttctctggcactatggtgccccgtctgaacctaaacaccagtgtggtg
gtggcccaagcctacccctccatccagctgctgggactagagatgttgttgcactacttc
ctggggtcagaagtcacaaccgccgcagccaagaacaagctgacgctcagcctggaacct
atttctcaccccttcctgtccagccccttctccttcaccaagcacgcccctctgctgatc
actgctgtgcacgacagcttcatctgcatcggcaaagacgccccagatgccttgctttcc
cttatatggaagaaccttgtccgtttcgtaagcacaacgattgatgctgcaggcaataag
aaggaaaggcaaggctctgaggtgctgaccttgctgctacaggctctacagggcatcatc
ttctcagaggccctccctgcaaacagggctctgagtctgctggaattgacagtgaagggt
atccctcagagagtactgggatctgcctcttaccaagtggccaaaatggatgtactgaat
ggaaccccagctctgttcttgattctcctgttctacaaccacagtctggtggcaggcttc
gtagaggatgagaggttcttcttgtgtttggagacactggtgagctgtggcctgtccggc
cccacgtcccccctggcgtttggggaggcggtcctggcggtggttgggcgcagcgcgggg
actctggagaacaaagaacagctttggaggatgtggagcctggtggtcaacccgctgact
gacaccatcacacagaccaatgaggtgaaccaaggggatgctctggagcacaacttcagt
gctgtgctcactgccctgatgttccccatcatacacctgctacctggcaaggttctgcta
cagatgactcagaagtccatgctgagtacgtggtgcaggctgtacaaggtgtttgcccgc
tgctctgccctggtggccaccgccgaggagaacgtctgctgtgaggagctgtgtgtcaag
atggctgccatattggacagaaaggctctgaaggttccagcaacgttgcatgcggttgct
aacatcctcctggtcatcgctgagagtgcagacttctctccctacacaccacagttccag
cagaagatgaaatctccccacacccatctaacctgggtgcgtaagaaaagcaaggcgctg
gggaacctgtataccttccagaccctgctggttcaatctcttgagaccttcaatgcactg
gaggcccctgagacggcccctaatggtacaggcctagccctggtctccatcctctctatc
ttgttctctaatctgtctctgggtacagccatccaggaggccctggcctctctctcacat
cccctcgtagccctctatgaacaggctgggaggactccaaatgagcagcgcaaatgtacc
tcaagtcttggagcaaagctggagaagctcctgagtgatgtcttggggtgcctgcagatc
cgttcagccctggcctatgatgatgagctgctctccctgctgtcccccttgctctgtgtc
ctgttcctccatcggcgcaagcaggtccgctccttagctacacagttctggaatgcaacc
ttcgccaacactctggtcctcgtctatccagaggaactcaagccggtgttgagccaggtg
aagcagaacactcctatcattttacctggatttcagtctgttgaagttccagatgaactc
agtggacagtactcgagtgagagctctcagctggggaccaaactgagtggagtacaggtc
acttctgtggtgaagagggactctctactgcccagggctgaggagataaaggacaggaac
ttcaagacctctaccaagcccatccctacaaaacttgactttggttctcacaagctgcct
cgtagagaggaactggaggagcaggcctcgatagactttgtgttcatcccccctgagacc
aaggagagagttctcactgagcaccagaaagaggtcaagagaaccaaaagggttgacatc
cctgccatgtacaacaacctggatgcttcccttgataccacagtcttcacccagtacaca
cagagtcaggaggaatcactggacaaattaccagcagatgagcaagccgaagatgccgct
aaagatgaggtcaaagcagagggtaacgtggaacgggatgaagcttctgaagttttggca
aaagacacccaggaatatatcagtccaaccaatgagatggcagaacccacaatggaagag
gagcctcctgaggaagtacttcctgagtctgcagacgtttccatggaggatgccaacgaa
gatgttccattggaggactccgatgttgccatggagtctagagaagagggcaccagccca
attgtttctggcggctctgatatcatctcagggacacctaagaaacacaacagtcgtcgc
cagtccttcatcactctggagaagtatgctgaggggaagcctgctagtcctgccagcgtg
gtgaggtttacaggccccctcaccaggaccttgaacagccaggagcaggagcctgcctct
cagaaaccatcggcagagattgaggctgacacagaccgtcaggactcccaggagactgaa
caagtaagacacaaaagctccaggagtgagtctttcctaaaggagggagaggaacacgaa
tcttcagaaaacaaaaaggaatctgaagttgagataatcgctgagaaacagtcaagtgaa
accacagaggacgatgtcatcccagacactcagactcaggtggaagtactgaaggaagtt
ccagttcctgcagttgaagaagtattgggaaacaacagtcaggaagaagaggaatctaaa
ggtcttttggaagattctaccagctcccagtccactctgagccaaggtgaaccaaggcgg
tccggacggcggaggagcaggccgctgagaccaggagaggacacagaggaacgaaatgat
ctagacaaacagaggaagaagtctcaacctggagaggatgtgagtcaaactgattcacca
aagactactccctctcttgctagtccaactcatagtcagtcacaaagtagagccagtagg
agaagtaagctggctgttgaggatgatggtgaaaaagacaagctgagaaagagaagtcac
aaggaagtgagtgagttgagtcaatcaaattcacagcttgccacaccttcacctgctggt
gatagcaacagcctatcacagggttggagaagcaacaaattggtcagggaatcaaaggag
ctggtaaaagacaaacagaagaggagaggtgttgcaaaggaagagctcagtcaaagtgac
tccctaacggtcactgcctctgataatgatagccaatcacagagtagacttagtcagagg
agtacgctggctgtggaagtagaggatgatggcaataagaaacgaaagggtggtagggct
cagaaggagaagccaagtcaaacaaattcacatgtagccaaaccatctcaacttgagagt
cagtcccagggtagaacaagcaggagcaaggccgtcagtgattcggacaaggttgaaaag
caggatcctactgaggaggagcaaagccaacgtgattctcagatggccacactatctcct
gatgcccaagcaggagatgaacaatcacagggtatatcaagcgggaggagtaaattggtc
acacagtccgaagaacagggtaaagacaaacagagaagagttggcacggaaaacacactc
agtcaaattgactcaaagatcaccacaccttcagccactccaaacgatagccagtcacag
ggtagaacaagcaggaaaagcaaggtgccccttgaagtggctgagttggaggacaaaaca
agtccaaatgtggccactgattcagcagcagcacccgagatgagccagactgattctcag
gtcactccttccgccaccagacaaacagagagccagccgaggctcagaggaagatccagt
aagagaagcaagttagaggaacagttgaaggccagcagcagccctatgccaaccccctta
gagactcatagctcccaggtggcagaccaggctggaacacagcaatccccccaaggaggc
aggactacgagacggagagcttctcagggcttactgtcctccaacttggagtcagacact
tcagagacccgggaggatgcccagaaacccaagaagagaggcaggaatcccaaatccacc
gaagatcttcaaagcccacttgctactgttggatcaggagagccaggggcttacgtagag
atcccaatggatctttctgaatcttctctaaagtctgaatctgaaaagtcagacttgcaa
aacccattgagtgagggcttagaagttaagattcctcaggatgtggatgaaaccattaaa
agtatcaactcccttaaacctgttatggatgttctgaaacttcctctgataacaaagaac
aatatggggcaaagggaggataacactgagatggtagatatagagggtgagtgtgagaat
accaagctgccttctcaattgatcgactcttcattcaaatctgatctagaacaacttaag
agtcagcatttttgcatatccccacggaagaacctcaaaacagtctcttctcaggagggt
gtccatagtgactttgggtgtgaagggccaacaccgctccaaaataagctcctcactgac
tctgagcaggccaactctccagtgccttccgctgatggaaattcattctcaggatatgaa
agtgtattacttgaaccaaacaaactattcacccctcccatctccaatggtctccccaca
gatacttcacccagcgaagctgcagaggagaaactgagcctgagtcttcaggttgctgag
tcttcaggggagaagcttgtagatgtgccgaagcctgtgactgtgtccagtgaggaggtg
acagaggagcacatgggggaagacaaggagaaccgacatccagagtctactaacaatgtt
ctagaggaggaccaaccagaagaggatgttttcatgtctcttgtgcataccaaaccagag
ggtttcaatgccttagatgaggagcaacaggaggagcagtacacatgtattaaagaaggc
cagccagaatctgacaacacctctactaggaccagagaaaatgacacagagcctcaggtg
aacgacgttcaagatatcactcctctccaagagagggcaaaaatggatacagttccaagt
cttgagtgtgaagaagaggacggtgaagaaactcagctagacaataatgacctagctcta
catcctctagactctgttgcccctctgaccttcgacactcgcgaagcaccagtgcctcta
catcatccaagtacttctaaagacgtgttgtgccaagattcgcctcccaagcagaagggt
ttggaggctatgatgggtttggaggtgggccagagccccagcagtggcaggatcaaggga
atgtggaccccctcagcctccccctccacctctatactgaagaagggacagaaaagacca
atagaagaggagatttcttcacctttcactaagtctcgacgagtatcatttgccgaccca
atccaacaccaggagctggcagatgacattgaccgtcgcagccctgtcatccgatccagc
tccccaagagccaaaactgccagcagtagcatcactcagcctaagtatatcacaacacca
acaaagggcctaatgatctgtagtccacgcaatctccgcagcccggggtacaagagctcc
aagaaatgcctgatctcagagatgagccaggagccgaggcccatccctaaggactgtgtg
tacccggccctggtcagctgttctgcgcctgtggaggcggtactgcctcagatcacctcc
aacatgtggcctcgtggttttggtcatcttgtgcgtgcccgtaatatcaaaacggttgga
gacctcagtgctctcacacccagcgaaatcaagaaccttcccattcgctccccaaagatc
tctaatgtgaagacagctcttaaaacataccacgaacagcagcggaagggccgtagtgat
gagttgaagagttttgaagagatggagaacatgacatcagagctggaggagccaaccctt
cctcagaaccaggaagaggagaacactcctggagaggccctcgccacagagatgttggat
gagccagtgtccatggagcagggtccaggggagaggcctgaccaccagaggcctgagggg
gatcttctgttggaggtggagtccctgggagctcgtctagctggggaggaactgagccgc
tgctcccctgaccagcttgttcagctccatgatcagctgggaaggatgatgaagaatgta
gtggtgcagctgcaaggcagactactttctcagaacaaggacagcggaccctga

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