Oncorhynchus gorbuscha (pink salmon): 124043999
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Entry
124043999 CDS
T07892
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124043999 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124043999 (clasp1a)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124043999 (clasp1a)
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124043999 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_DAAF5
Sec7-like_HUS
Dopey_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
124043999
NCBI-ProteinID:
XP_046219195
LinkDB
All DBs
Position
LG09:68542252..68638699
Genome browser
AA seq
1658 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGACLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSSKAPPSGRRAVAVASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNRDMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLVAGALDYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNSGGSLQRSRS
DVDVNAAASAKSRLITVPSASPFSSAAALPPGSYASLDGTPGKIDTGRVRTRRTSSGNAV
GASATVTDSRGRSRAKMMSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPSASSTPADKRSKVPRSQGCSRDSSPNRLGLARLCGKALVPGTPLSSYNTLARSR
IPRPSMSQGCSRDTSRESSRDTSPARGFKPLASRRTSRSTSALSTADPHSQSDRFGLIHQ
ARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASS
ACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVE
LKRLCEIFTRMFADPHSKRVFSMFLETLVDFILVHREDLQDWLFVLLTQLLKKMGADLLG
SVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTD
FVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWVVEELSGRSGTAALLEGHLEERCKQAA
QVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSVSSPSNTIGRTPPR
HTPSRTSPLTSPTNCSHGGLSPSRLWGGCWSGDGLSKHPPPPHPPPPPSTPSGPALRVLR
RAYSPSMLEYDTENMNSDEIYSSLRGVTEAIQSFSYRSQEDLNEPRGKRDDAVGREGVAS
SPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRAREFAPYGYGDPITSSYDKSA
LKEAVFDDDVEQFRDCRRQDGSGENKMVLPKGFAPGSQDHSDLVADLLKELSNHNERVDE
RKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPAR
FKNYAELTIMKTLEAHKDSHKEVLRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINL
AAIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELK
PHLQLLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtctggcccaggtggtgcagaaagacctggggcggaag
gtgcaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaagaccagacggctctggacaggatggtggacggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggctttgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtaggaacagtactggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaattctgctgctgaagatcatggag
caggctgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagcgtgcctttgtctcatctcaactctcaacatgtacggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggagatcccacc
agtcaggtgagagacgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggatcttagcaagaagggcctgccacagtcacggttgaatgtaatcttc
agccgatttgatgaagtacaaagatctgggaacatgatcccatcctccggttcagataag
aactttgatgatgaggactctgtggacgggggccggtcctcctcctctgcatcgtcctcc
aaggcgccccccagtggtaggagggctgtagctgtggcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagatatg
gaggacaatctctccaaggttcgggaggttctatctgacgacaaaaacgactgggagcac
agagtcgtcgccctgaagaaggtgcgttctctgctcgtggctggagccctggactatgat
agtttccctcagcagctccgtctgctggaggcccctctcaagctgtcagctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgttgctggga
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
cgaaggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggctctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcagaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtgagttccagggtgaactccaactccggcggttcccttcagcgttcccgtagt
gatgtcgacgtgaacgccgcggccagcgccaagtcacgcctgatcaccgtgccctccgct
tctcccttcagctcagcagctgccctgcccccaggctcctacgcctcactagatggcaca
cccggtaaaattgatactggccgtgtgcgtacgaggagaacaagctccggcaatgctgtc
ggagccagcgctactgtgactgacagcagggggcgcagccgggccaaaatgatgtcccag
tcccagcgatcccgatctgctaaccccactgggggtggtaaggcccggacttcatccaat
cagactggcagccgctccagttcccctggcaagctgctcggccactcgtctgggtacggg
aggatcagcaggcccccctcagcctccagcacccctgcagacaagaggagcaaggtcccc
cgcagccagggctgcagtagagactcctctcccaacaggctgggcctagccaggctgtgt
ggtaaagctcttgttcctggtactcctctctcctcctacaacacgctagcaaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagccga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacctcccgctctacc
agcgccttatccacggctgacccccacagccagtcagaccggtttggtttgatccaccag
gcccgcatttctgcctcggtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctactctgacgatgacgctaacagtgatgcgtccagc
gcctgctcggaacggtcgtacggctcccggaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctgaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatcttcaccaggatgttcgcagatccacacagcaagagagtg
ttcagtatgtttctagagactctggtagactttatcctggtgcacagagaggacctgcag
gactggctgttcgtcctgctcacccagctactgaagaagatgggagctgacctgctgggg
tctgtccaggccaaggttcagaaggctctggacatcaccagggagtcttttccgtttgat
cagcagtttaacatcctgatgagattcattgtggatcagacacagacacccaacctcaag
gtgaaggtagccatcctgaagtacatagagtcactgggaagacagatggatcctacagac
tttgtcaactccagtgaaacgcgactggctgtatctcgcatcattacgtggaccacagaa
cccaagagctctgacgtcaggaagacccttcataactgggtggtggaagagctatcaggc
aggtccggtactgcagccttactggaggggcacctggaagagaggtgtaagcaggcggcc
caggtggtgctgatttctctgtttgagctgaacaccccggagttcaccatgctgctggga
gccctgcccaagaccttccaggacggggccaccaagctgctccacaaccacctcaagaac
tccagcaacaccagcagcgtgagttctcccagcaacactattgggcggaccccaccccgc
cacacccccagccggaccagccccctcacctctccgaccaactgctcccatggtgggctg
tctccgagtcggttgtggggtgggtgttggagtggcgatgggctgtctaagcacccccct
ccccctcatcctcctccgcctccctccaccccctctggccccgccctcagggtcctccgc
agagcatactctcccagtatgttggagtatgacacagagaacatgaactctgatgagata
tacagctccctgcgaggggtcacagaggccatccagagtttcagctatcgcagccaggag
gacctcaacgaaccaagagggaagagggacgatgctgtggggcgtgaaggtgtggcgtcc
tccccaggctcagatgcccgtttggggctggatgtggtggagggtgggcgtacggccttg
gataacaagacctccctcctcaacactccgtctccccgctccttctccgggccgcgagcc
agggagttcgccccctacggctatggggatcccatcacctcatcctacgacaagagtgcc
ctaaaggaggccgtgttcgacgatgacgtggaacagttcagagactgccgtcggcaggat
ggcagtggtgagaacaagatggtgctgcctaagggctttgctccgggttcccaggaccac
tcagaccttgtggcagatcttctgaaggagctgtccaatcacaacgagcgtgtggatgag
cgtaagggggccttggtggagctgctgaagatcacacgagaggatagcctggccgtgtgg
gacgaacacttcaagaccatcctcctactgctcctggagacactgggggataaagaccac
accatccgggccctggctctgcgggtactgaaggagatcctgagaaaccaaccggcccgc
ttcaagaactatgctgaactcaccatcatgaagacactggaggcacacaaggactcccac
aaggaggtgttgcgggcagcagaggaggctgcctccaccctggccggctccatccaccca
gagcagtgtatcaaggtgctgtgtcccatcgtccagacggctgactatcccatcaacctg
gctgccatcaagatgcagaccaaggtgatcgaacgcatcaccaaggagtccctgcaccag
ctgctgcctgacatcataccaggactactgcagggctatgacaacacggagagtagtgtt
cgcaaggccagtgtgttctgtctggtggccatctactccgtgattggagaagagctcaaa
ccacacctgcagctactcacaggcagcaagatgaagctgctgaacttgtacatcaagagg
gcccagacgaccaacagcaacagcagcagttcctcggatgtgtcctcacacagctag
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integrated database retrieval system
