Oncorhynchus gorbuscha (pink salmon): 124044024
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Entry
124044024 CDS
T07892
Symbol
snx4
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124044024 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124044024 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124044024 (snx4)
Membrane trafficking [BR:
ogo04131
]
SNARE
SNARE associated proteins
Others
124044024 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
124044024 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
124044024 (snx4)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124044024 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Motif
Other DBs
NCBI-GeneID:
124044024
NCBI-ProteinID:
XP_046219288
LinkDB
All DBs
Position
LG09:complement(72118109..72132589)
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AA seq
460 aa
AA seq
DB search
MMADSGSEEIAVIGNTDLTSAELENNIKNTMVEIEKWTSVLRKMEISVGEAEKRTGKNTV
NMQEIYTVYLIETRPVDAVTEGIIPAPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKR
AEIVWHKLSADNMDPDFVERRRVGLENFLLRLASHPVLCNDKIFYIFLTEEKGWKEMVYE
TGFQAKADSRLKAMNAAFRVKNPDKRFTELKHYSDELQTVVSQLLRVRACRNSQNIKIEA
AESKKLCKIFLQRVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASV
DDILEEEEHYADQLKEYLFYTEALRAVCRKHELTQFELEMAAQDLASKKQQKEELVTGTV
RTFSLKGMTSKLFGQETAEQREVKLQVLEQQIEEGEEAVKEKNAESDEFVKTAWIDIEHF
KDQKDRDLKEALISYAIMQISRCKKGIQVWTNAKECFNKM
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactcgggatccgaggaaatagcggtgatcgggaacaccgacctcacatcg
gcagaactagagaacaacattaaaaacacgatggtcgagattgagaaatggactagtgtt
ctaagaaagatggagatcagcgttggagaggcagagaaaaggactgggaagaatacagtc
aatatgcaggagatatacactgtttacctaattgagacacggccggttgatgctgtgaca
gaaggtataatcccagctccagactccttatggaggagatacagcgagtttgagctacta
agaaactacttgttggtcacttatccctttgtcgttgttgccccgttacccgagaagagg
gcagagattgtgtggcacaagctgtcagcggacaacatggacccagactttgtggagaga
aggagggttggactggagaacttcctgctccgattagcctcccatccagttctctgcaac
gacaagatcttctacatcttcctcactgaggaaaaaggatggaaggaaatggtgtacgag
acaggatttcaagcaaaggctgattccaggttgaaagctatgaatgcagcattcagggtg
aagaatccagacaaacggtttacagagctgaaacactacagcgacgagctacagactgta
gtctcccagctgctgagagtacgggcatgcagaaattcacagaacataaaaatagaagca
gcggaatcaaagaaactgtgcaaaatctttctccagagggtagcagatcgactgtatggg
gtgtacaaagtgcatggaaactatggacgagtcttcagtgagtggagtgccatagagaaa
gagatgggagatggactacaaagtgctggtcatcacatggatgcgtatgctgcttctgta
gatgatattctggaggaagaggagcactatgctgatcagctgaaggagtacctattctat
actgaggcactaagggcagtgtgcaggaagcatgagttgacacagtttgagctggagatg
gctgcacaggacttagcctctaaaaaacagcagaaggaggagctggtcacagggactgtg
cggacgttctcactgaaggggatgaccagtaagctgtttggccaggagactgcagagcag
agggaggttaagttacaagtgttagaacagcagatagaggagggagaggaggctgtgaaa
gagaagaacgccgagagcgatgagtttgtgaagactgcctggatagacattgagcacttt
aaagaccaaaaggaccgggacctgaaggaggccctgattagctatgcaatcatgcagatc
agcaggtgtaaaaagggaatacaagtgtggaccaacgcaaaggagtgtttcaacaagatg
tga
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