Oncorhynchus gorbuscha (pink salmon): 124044043
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Entry
124044043 CDS
T07892
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124044043
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124044043
Endosome - Golgi transport
Rab GTPases and associated proteins
124044043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
124044043
NCBI-ProteinID:
XP_046219351
LinkDB
All DBs
Position
LG09:73705223..73729286
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AA seq
1151 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNEFFLLQRRRGHGDTGGKFTGLLVGALDSVLDSNARVT
PFRILLQMPGSQVSWTIACGAAVGEMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPDKFREALLKFELCFGLPSSEKLVTTYSCCCWKGRVPRQGWLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTDMVRVMTRRCQLDFSMFLSLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQSSNITKRVLEEQALRTYVLALFRLPRGERLQ
EVALCSVWTPHARCHTTGTLFTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDGLTSRLRALQWKHSMFRSKKSLTSSSPYYTFCYDT
MYCDGEDIEERALRQTVNTEALMACYHHSQPDPNNSTATMEQVKERLWEDHFLEYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDASSELASHPGYYSGLVTESMGQSSLATEEIE
RDLHRSLPDHPAFQNVKGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFS
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRDRLPELAEHIPDLSPLSSISLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANATALCASADDSQALMILTGFLDQV
KYDEDPSPPTPTPHPLSSQSGEEEGRPPVKQHTLITDLIADSYEKFGDLTVRQIEKLRCR
HRIQVLQAHEDTTKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGGTTLALQH
HDPGRPYVEQYRVDRVQFKSLYMLLVPWLCGFHTDTVAHRTFTLLDQDRDSLITFREFAG
WLDTLYFEELNEKVRLLYRLHIPPALTESEDDPSPLKSPQLSTTRPLHVELPNAPDVCVH
VEVEMRDFQEQLKQMLKDLAKEKEKDVEQPVPPMNQREFIQFCKTLYSMFHGNPDENELF
QAIATVTSLVLQIGEVGHRSRCSGSEVSSEGGARDEVEDDHREGSQEDHPVFSTEEEEEG
ERKEGTRKSSGSESQSEWAVSYAQILASLLTEQQLVNFFEKPMDLSAKVAEAKVKQYHER
AGLLMLQQGTS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccggaggaagttttgctgaaaaatgcattgaagctttgggttaccgaa
aaatctaacgaattcttccttttgcagcgcagaagagggcatggggacacaggggggaaa
tttacaggacttctggtgggagctctggactcagtgctggactccaatgcccgggtcaca
ccgttccgtatcctactacagatgcctgggtcacaggtcagctggacaatagcttgtggt
gctgctgtcggagagatgaacagacattgggactggctggtccagaacctactccactct
ctctcagtgtttgagaacaaggaggatgtcgccagcttcgtaaaagggaaagtcaagggt
ctgatagcggaggaggtgagggggaggcaggcggctcaggaggaggagcctgataagttc
cgggaggcgctgctgaagtttgagctatgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaaggggcgggtcccccggcagggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtgatc
ccgtgggcggaggtgacgaggctggagcgggtctctacgggtctcatgacggacatggtg
cgtgtgatgacgcggcggtgccagttggacttctccatgttcctgagcctggatgaggca
tttggggtcattggtcagctggctgacatcgccctgcgacgcctgctggacagtgaaggc
ctggagctggaccgagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcgttaaggacatatgtcctggctctatttcggctaccacggggcgaacgtcttcag
gaagtggcgctgtgttcagtgtggacgccccatgcccgctgtcacacaacaggaacactc
ttcaccaccgacagctacctatgcttcgccagccgagaggagggccactgcagcctgctt
atccctctctcagaggtgatctccatagagaaggcggagagcaccagcctgctgccgaac
ccagtgatcgtcagcgtgaggagtaagaaggccttccagctgatcgagctgcaggacaga
gacagcctggtggacggcctgacatcacgcctcagagccctccagtggaaacactccatg
ttccgcagcaagaaatctctgacctcctcgtctccctactacaccttctgctatgacacc
atgtactgtgacggggaggatatcgaggagagagcactacgtcaaacagtgaacacagag
gctctgatggcatgctaccatcactctcaacctgaccccaacaacagcacggctaccatg
gagcaggtgaaagagcgtctatgggaggaccacttcctggagtacggtcgaggcgtccac
atgttccgcacagagaagatccagaagctggttgccatggggataccagagtcgctacgg
ggagagctatggatgaccttctctgatgcttcatcagagttggcatcccacccaggctac
tactcggggctggtgacagagtctatggggcaaagcagtctggccacggaggagatcgag
agagacctgcaccgctctctgccagaccaccccgccttccagaacgtcaaaggcattgcc
gcgttgcgccgtgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcgatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctca
ctgctagtggctgtgtgtgagagaatgctacctgactacttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccgggatcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccatctccctgtcctggtttctcaccctc
ttcctcagcgtgcttcccttccgcagcgctgtctgtgtggtagactgcttcttctttcac
ggcatcaaagccatcttccagctggggctagctgtgctggatgctaacgctacggcactg
tgtgctagtgcagatgacagccaggcactcatgatcctcactggttttctggaccaggtg
aagtacgatgaggatccatctccccctacccctacccctcaccctctctcatctcagagt
ggggaagaggagggcagaccgcctgttaaacaacacaccctgatcactgacctcatcgct
gactcctatgagaaatttggagacctgacggtgagacaaatagagaagttgcgatgcaga
caccggatccaggttctccaagcacacgaggacaccaccaaggagaatgcgctcagggtg
gtgaccccagatgtctctctatcccctgaaaacctggctgatgtctacgacctcttcaag
acagagcacttcatcaacctgtactggggcgatgggggcaccacattggccctccagcac
catgacccaggccggccctatgtagagcagtacagagtggaccgggtccagtttaagagc
ctgtacatgctgctggttccctggctttgtggctttcatactgacaccgtggcccaccgg
accttcacactactggaccaggacagagactcactcatcaccttcagagagttcgctggg
tggctggatacgctatactttgaggaactgaatgaaaaggtcagactactgtatcgtttg
cacatacctccagctctgactgagagtgaggatgacccatctccactgaagagccctcag
ctgtccactaccagaccactccatgtagagctgcccaatgctcctgatgtgtgtgttcat
gttgaagtggagatgagagactttcaggaacagttgaaacagatgttgaaagacctggct
aaagagaaggagaaggatgtggagcaacctgtacctccaatgaaccagagggagttcatc
cagttctgtaagaccctctacagcatgttccatggcaacccagacgagaatgagctcttt
caggccatcgctacagtgaccagcctggtgctgcagatcggcgaggtcggtcaccgcagc
cgctgctcagggtcagaggtcagcagcgagggtggggccagggacgaggtagaggatgat
cacagggaggggagtcaagaagaccatcctgtcttcagcactgaagaagaagaagaagga
gagagaaaggaggggaccagaaagagttcagggtctgagagtcagagcgagtgggcggtc
agctacgctcagatcctggcttctctcctcacagaacagcagctagtcaacttctttgag
aaaccgatggacctgtcagcaaaggtggctgaggcaaaagtgaaacagtaccatgaaagg
gctggtctgcttatgctccagcaagggaccagctga
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