Oncorhynchus gorbuscha (pink salmon): 124044060
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Entry
124044060 CDS
T07892
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124044060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ogo04050
]
124044060
Cytokine receptors [BR:
ogo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
124044060
SSDB
Ortholog
Paralog
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Motif
Pfam:
Death_EDAR
SCIMP
DUF4501
TNFR_c6
RIFIN
Motif
Other DBs
NCBI-GeneID:
124044060
NCBI-ProteinID:
XP_046219385
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Position
LG09:74592979..74640460
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AA seq
481 aa
AA seq
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MFQKGSHIESLFLCLLLVSCPPCLRSEYSSCGEFEFYNQTFSSCRPCPPCQPGQEPHMNC
GYGTKDENFVCVSCPAGKYSKGKYEICRRHKDCEGLYRATVLTPGTPDSDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECMLTKVPSVSTSSTTMFPHPHKDATGQGHLATA
LIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVV
IFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLL
NLGNKPDLCLLSLGLRDRDKTGSNPTSPINANNISNGNANIINNNNYNKATGIQSRRKKI
LDLYARACSVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIG
GMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCAS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaggaagtcacatagagtccctcttcctctgtttgttgttggtgtcctgt
cctccctgtctcaggtcagagtacagtagttgtggagagtttgaattctacaaccagacc
ttcagtagctgccggccctgccccccatgccagcctggacaggagccccacatgaactgt
ggctatgggactaaggatgagaactttgtgtgtgtgtcttgtcctgcggggaagtactca
aaggggaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgcgctaca
gtactcacacctgggacaccagacagtgacgcagactgtggaccctgcttacccgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcagaac
gcaccgcgcaacactaaagagtgcatgcttaccaaagtccccagtgtctcaaccagcagt
actaccatgttccctcaccctcacaaagacgccacaggacagggtcaccttgcaaccgct
ctcatcattgccatgtcaaccatcttcatcatggccatcgccatcgtcctcattatcatg
ttctacatcctcaaagccaagcccagcggacaggcgtgctgctcaggtcaggtggtgaag
gctgtggaggctcagaccaacaaacaggaggacaagaaagatgttccagacaacgttgta
attttctctgaaaaggatgaattcgacaaactcaaacccacgcctccgaagacggtgaaa
agtgagaatgatgcatcgtcagagaacgagcagctgttgagtcgtagtatggacagtgat
gaggaggcagcgttggagaggcagggggcggctgatcctaatcccagcctctgtcttctg
aacctgggcaacaagccggacctctgcctactctctttggggcttcgcgacagggataag
actggatccaaccccaccagccctatcaacgctaacaacattagcaatggcaatgctaac
atcatcaataacaacaactacaacaaggctacagggattcagagccggaggaagaagatc
ctggatctgtatgctagagcctgcagtgtagccgagggtctgagtcctacagaactaccg
tttgactgtctggagaaggccagtcggatgctgagctcctcctacagtagcgaggcagcc
gtggtgaagacctggagacacctggcagagagctttggcctgaagagggatgagatcgga
gggatgagtgacggcctgcagctgtttgaaaggatcagtaccgccggctatagtatccca
gacctgctcaccagactagtgcagatagagagactggatgctgtggagtcactgtgttct
gatgtactgggaggaggagacacacacactgttcctctgtcctcaccacgctgtgcaagc
gtctga
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