Oncorhynchus gorbuscha (pink salmon): 124044188
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Entry
124044188 CDS
T07892
Name
(RefSeq) AF4/FMR2 family member 3-like isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124044188
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124044188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
Motif
Other DBs
NCBI-GeneID:
124044188
NCBI-ProteinID:
XP_046219669
LinkDB
All DBs
Position
LG09:84822431..84863083
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AA seq
1397 aa
AA seq
DB search
MPTVLRGTGKLSIVCSLIRCASQHLEQEMVVADMHCSASQVTGSERNGCSKDILWDMTHS
WPSQQPSGGSQAQRFPYNPKEAKQHTTQQTWENVQQLRMTQPHVAPHKSMLADDLKLSSD
EEDADKDPEQSASWTGNNSLSEQHTHTHGGRVRHSCSDSSGSDSSGSDSSSESEEESSSQ
RLRSPSPETHSDPGTPTDAQSLGCTEETDHPPTTQWQLDKWLKKVRKKSSSWDSSNRDHT
QRATEHSSPSPDRHRAPSPARSWGTREDYSPGQSPVPSPHFNYSPRHSPRPSPGYSPCPS
PCHSPRHSPILSPVPSVCLSPCLSPRANRDPSPIPRHPPKSPSPSLTQSSSRHYPQVRSP
HQESFRPLTRPSLTSSPSHRPKIRITPAPSFESKSKLRHSSSPQPPLHYGSRPKPKQSQS
VPTPKNTAKAAPALSTEPSHRPRPSPNSNPRLHSQPRLKHNPILALKTSQQLTTSGQRPK
ESSRLSHNSNSKPRPKFGPSLTTSLSTSPSPTPRAKTLPPAGPSRETSSRVGHSSKSSPK
PHSRPISKAGSGPSSRSSPSPIPKVKSRENPAPHPKPPQRKPHSRETEREVDNRRETQAV
DRKADRQAEGRGRGNVERQGERPGEKQGERRLAEDKLLRRPWVQSSEEEEDVEERKRRRE
EREKEEKRRRRKEQQQQRGEWQAVQPKQRPHTNSERHRNPIDPQRHGTKKKRRRKSEEEE
RESQPDPSLPPSPSSPTPVIPPTDSSSSSSSSSESDSEPSLPPNVAKVPADSTSSQRPIP
RRGHQGPGRPSDTRPGVLYPTATSNQAHGPQSQAKQKLYTLVPFGRSEQAPSSHRGLRNL
VVQLNLSLLSRVPDTTTDTPASHKHPSSSSSKQKEAMRHPYTPETEGGDSRRKRKSENGI
QHHRVSKRSNSHTNGPSAHTESTANRESKQSNSQTNGPSAHTESTANRESKQSNSQTNGP
SAHTESTANRESKQSNSQTNGPSAHTESTANRESKQSNSQTNGPSAHTESTANRESKRSN
SHTNGPSAHTESTANRVSKRSNSHTNGPSAHTANRCLDPHKDARHNRFLEDYLDSKRPLS
PLSPLSDTPDHTKPPIKTKPPVQHYTNSEVPRTHAKMEVECVGVSGKPPHMCESWGPPLQ
RAGSQRGTVLNHEPPHHAEYYMHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAME
EGPLEDKSPYTMYTETVELIRYAMRLKNHSGPGARQEDKQLAVLCFRCLALLYWQMFRLK
KDQAMKYSKALMDYFKSSPKLPTTPLIWSGSGKGTGGPPTSLSPSPSALPLGSSPSSLIN
IPLRIHQMAANHLNITNNVLYSYEYWELAESLVRDNNEFFNYLNTLSGPLTLHSSIAHAV
QYTRQGLQWIRISASVG
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcggcacgggaaaactttccatcgtgtgttcactgattcgttgc
gcatctcagcatctggaacaggaaatggtggtggcagacatgcattgctctgcctcacag
gtcacaggaagtgagcgtaacggctgttccaaagatattctatgggacatgacccattcc
tggccatcccagcaaccctcaggagggagtcaggcccagcgcttcccctataaccctaag
gaagcaaagcagcacacaactcagcaaacttgggagaatgtgcagcagctgaggatgacc
cagcctcacgtggcgcctcacaaatccatgctcgctgatgacttgaagctcagcagtgat
gaggaggatgctgacaaggaccctgagcagtcagcctcctggactggtaacaatagtctg
tcggaacagcacacacacacacatggtgggagggtgagacattcatgctcagactcttca
ggctcagactcttcaggctcagactcctccagtgagtcggaggaggagagcagcagccag
cgccttcgtagccccagcccagaaacacactccgatcctgggacacccaccgacgctcag
tccctcggctgcaccgaagagacagatcacccccccaccactcagtggcagctggataag
tggctgaagaaagtccgaaaaaaatcctcctcctgggattccagcaaccgtgaccacacc
cagagagctacagaacacagctcgccctccccagaccgccacagagccccgtctccagcc
agatcctgggggaccagagaggactacagccccggccagagccctgttcccagcccacac
ttcaactacagccccaggcatagccctcggcctagccctgggtacagcccctgtcccagt
ccttgccacagcccaagacacagccccatccttagcccggtccccagtgtctgtctgagt
ccctgcctcagccccagagccaaccgcgaccctagccccataccccgacacccccctaag
agtcctagtcccagccttactcagtctagctcccgtcactatcctcaggttcggagtcct
catcaggaaagcttcaggcctctcacgcggcctagcttaacatccagcccgagccataga
cccaaaatcaggatcacacctgctcccagctttgagtccaagagcaaactgaggcacagt
tcctctccccagcctccacttcattacggctccaggcctaaacccaaacagagccaatct
gttcccactcccaagaacacagccaaggcagcccctgcgctgagcactgagccaagccac
agacctagacctagtcccaactccaatcccaggcttcattctcagcctaggttgaaacac
aaccccatcctagcactcaaaaccagccaacaactaacaacctctggacaaaggcccaag
gagagtagcagactcagccacaattccaactccaaacccaggcccaagtttgggcctagt
ttgacaaccagcctcagtaccagtcccagtcccacacccagggccaagaccttacctccc
gcaggccctagcagagagaccagcagcagagttggtcacagttccaaatcgagtcccaag
ccacattctcggccgatctccaaagctggttctgggcctagctctagatccagccccagt
cctatacccaaagtcaagtcccgggagaaccctgctccccacccaaagcctccacagagg
aagccccattccagggagacagaacgggaggtggacaaccggagagagacccaggcagta
gacaggaaggcagacaggcaggcagagggaagggggcggggtaatgtagagagacaggga
gagaggccaggggagaaacagggagagagaagactggcagaggataagttgcttagacga
ccctgggtccagagttcagaggaggaagaggacgtagaggagagaaagaggaggagggag
gagagagagaaggaggagaagaggaggaggaggaaggagcagcagcagcagagaggtgaa
tggcaggcggtccagcccaagcagagacctcacaccaacagcgagcgacaccgcaatccc
attgatccacaacgccacgggactaagaaaaagaggaggaggaagagtgaggaggaagag
agagagtctcagccggacccttcccttccgccgtcgccctcctcccccacacctgtcatc
cctcccacagattcctcttcttcatcatcttcctcatcagagtccgactcggagcccagt
ctgcctcccaacgtcgccaaagtccctgccgactccacgtccagccagcgtcccatcccc
aggagagggcaccagggccctgggaggccttcagacaccaggccaggagtgctctacccc
actgccacatccaaccaagcccacgggccgcagagccaggcaaagcagaaactctacacc
ttggtcccgtttgggcgtagtgagcaagccccatcctcacaccgaggcctgaggaatctg
gtggtgcagttaaacctctccctgctcagcagagtacctgatactacgacagacacccca
gcctctcacaaacacccctcctcttcctcttccaagcaaaaagaggccatgagacacccg
tacaccccagagacagagggaggagacagcaggaggaaacggaagtcagagaatggaatc
cagcaccacagagtgagtaagcggagtaactcccacaccaacggcccctcagcccacaca
gagtctacagctaacagagagagtaagcagagtaactcccaaaccaacggcccctcagcc
cacacagagtctacagctaacagagagagtaagcagagtaactcccaaaccaacggcccc
tcagcccacacagagtctacagctaacagagagagtaagcagagtaactcccaaaccaac
ggcccctcagcccacacagagtctacagctaacagagagagtaagcagagtaactcccaa
accaacggcccctcagcccacacagagtctacagctaacagagagagtaagcggagtaac
tcccacaccaacggcccctcagcccacacagagtctacagctaacagagtgagtaagcgg
agtaactcccacaccaacggcccctcagcccacacagctaacagatgtctagacccccac
aaagatgccagacacaacaggttcttggaggactacctagacagtaagaggccactgtcc
cccctgtcccctctctctgacaccccggaccacaccaagcctcccatcaaaacaaagccc
ccagtgcagcactacacaaacagtgaggtgcccaggacccatgctaagatggaggtggag
tgtgtaggtgtgtccgggaagcccccgcacatgtgtgaatcctggggacctcctttacaa
cgggcagggagccagagaggaactgtactcaaccatgaacccccacaccatgctgagtac
tacatgcatgaggccaagagaatgaagcaccgtgcagatgccatggtggataagctgggg
aaggcagtgaactatgtggatgctgctctctccttcatggagtgtggcaaagctatggag
gagggaccactggaggacaagtcaccctataccatgtacacagagacggtagagctcatc
aggtatgccatgaggctgaagaaccactctggtcctggggccagacaggaagacaaacag
ttggccgtactgtgtttccggtgccttgctctcctgtactggcagatgtttcgtctgaag
aaggaccaagccatgaagtactccaaagctctaatggactactttaagagttctcccaaa
ttgcctactacacccctcatctggagcggctcaggaaagggcacaggggggcctcccacc
tctctctcccccagcccctcagccctccccctgggcagctccccctcttccctcatcaac
attcccctgcgtatccaccagatggcagcaaaccacctgaacatcaccaacaatgtccta
tacagctatgagtactgggagctagcagaaagcctggtcagagacaacaatgagttcttt
aactacctgaatacactgtcagggccattgactctccacagtagtattgctcatgcagtc
cagtacaccagacagggtctgcagtggatccgtatcagtgccagtgtgggctag
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