Oncorhynchus gorbuscha (pink salmon): 124044231
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Entry
124044231 CDS
T07892
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a isoform X1
KO
K04683
transcription factor Dp-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
ogo04110
Cell cycle
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124044231 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124044231 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124044231 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124044231 (tfdp1a)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124044231 (tfdp1a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
124044231 (tfdp1a)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124044231 (tfdp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
FMP23
Motif
Other DBs
NCBI-GeneID:
124044231
NCBI-ProteinID:
XP_046219783
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All DBs
Position
LG01:85474201..85486259
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AA seq
471 aa
AA seq
DB search
MLDTAKIGFRLGRWKGFRPPLPLSSMPTKQPSKKQTKRVHSELVGDIRASLSPDRALLCS
DRMMAKDVGLMETNGELKVFIDQNLSPSKGVLSLVAVHPASIPVAKQLLPKTLGLSNVNI
APHMVIGTPQRPSVSSAILVNSPHTPSSQFLTQSQPADASPWSSGKRGKKGEKNGKGLRH
FSMKVCEKVQKKGVTSYNEVADELVAEFSAADNHISPNDSHVYDQKNIRRRVYDALNVLM
AMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLV
QRNRQTEQQTNRPPPPNSLIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDI
EVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVTEMAQGPISNVYITGGSSTNGGR
HHGQGSDSGADGTLASSSNDSHYSGSRVETPVSYMGDDDEEDDYDENDDED
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaccgccaagattggtttcagactaggacggtggaagggatttagacctcct
cttcctctgtcctcgatgccaacaaaacagccgtcgaagaagcagacgaaaagagtgcac
tcggaactcgttggtgacatcagagcttccctttctccagacagagccttactttgttcc
gacaggatgatggccaaagatgttggtctgatggaaaccaatggagaactgaaggttttt
attgaccagaatctgagtcctagtaaaggtgtcttgtctctggttgccgtccatcctgca
tccatccctgtggccaaacaactactgcccaaaacactggggctctccaatgtcaacatt
gctccacacatggttattggtacgccccagaggcccagtgtttccagtgccatactggtg
aacagccctcacacacccagctcccagttcctcacacagagccagccggccgacgcgtcg
ccttggtcatcggggaagcgtggtaagaagggggagaagaatggaaagggcctgaggcat
ttctccatgaaggtgtgtgagaaggtgcaaaagaagggtgtcacctcgtacaatgaggtg
gcagatgagctggtggcggagttcagcgctgcagacaaccacatctcccccaatgactct
catgtgtatgaccagaagaacatccgtaggcgtgtgtacgacgcactcaatgtgcttatg
gccatgaacatcatctctaaagagaagaaagagatcaagtggattggtctgcccaccaac
tcggcccaggaatgccagaacctagaggtggagagacaaaggcgactggagagaatcaag
cagaagcagtcacaactccaagagcttatattacagcaaatagcctttaagaacctggtg
cagcggaaccgacagacggaacagcagaccaacagacctccaccccccaactctctcatc
cacctccccttcatcattgtcaacactagcaagaagactgtcatcgactgcagcatctcc
aacgacaagtttgagtacctgttcaactttgacagcatgtttgagatccacgatgacatt
gaggtgctgaagcgtatgggcatggcctgtggcctggaggtgggcaagtgttccccggag
gacctgaaggtggcacgtagcctggtgcccaaagccctggagccctacgtcacagagatg
gcccagggccccatcagtaacgtctacatcactggaggatcctccaccaacggggggcgc
catcacggccagggcagtgacagtggtgcagatggtaccctggcctccagctctaatgac
tctcactacagcggctcccgtgttgagacccctgtgtcgtacatgggggatgatgacgag
gaggatgactatgatgagaatgacgatgaagattaa
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