Oncorhynchus gorbuscha (pink salmon): 124044257
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Entry
124044257 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124044257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124044257
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124044257
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124044257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_UBOX
fn3
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
zf-RING_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
124044257
NCBI-ProteinID:
XP_046219829
LinkDB
All DBs
Position
LG09:90422310..90496364
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AA seq
669 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILISHCSPNEPVQSISAFQCPTCR
YAITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERVTPNGTAMTSPSKRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTSHRLIEPMPDCHIRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKQTLDSNLSNLIKRNNELE
TLMGKLIQICQHVEGNASRQENKLLEECDLLMDVVQQRRQIIATKINEGKAIRLRKLAQQ
IATCKQIIERSSSLITQADHTLREGDHARFLQTAKSICERVSMATASSQILIPEINLNDT
FDTFALDFTREKKMLEGLDYLTAPNPPIIREELCTASYDTITAHWTSDDEFCVVSYELQY
AIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTKYIFMVKAINQAGSRSSVPGK
LKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETSSKKSHNQDRFTSQGSYGVTGNVYIDS
GRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWVLSRCNNSWVVRHNSKEMPIEPS
PHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDITFAQPVCPVFNVWNKCLTVLTGLPIPD
HLEGTDCQD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagttgacctgcccaatctgtctggagctcttcgaggacccc
ttgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgtatcctgatctcc
cactgcagccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgccatcaccctcaaccagaggggcctagagggactgaagcgtaacgtcactttgcag
aacatcatcgaccgcttccagaaggcttccgtgagcgggcccaactcccccagcgagact
cgccgtgagcgggtcaccccgaacggcacggccatgacctcccccagcaagagggtgcag
tgtcagttctgtgagcaagaccctccccaggacgccgtcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcttgaaggccacccaccccaataagaagcccttcaccagc
caccgtctgatcgagcccatgccggactgccacatcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgttacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagttgccgccctcagcgaccgctatgagaaa
ctcaagcaaaccttggactccaacctcagcaatctgattaagaggaacaacgagttggaa
actctgatgggcaagttgatccagatctgccaacatgtggaggggaatgcatccagacaa
gagaacaagctcctggaagagtgtgacctcctgatggacgtggtacagcagagaagacag
atcatagccaccaagataaacgagggcaaggctatccgtctgcgaaagctagcccagcag
atcgccacctgcaagcagatcatcgagagatcatcatccctcatcactcaggcagatcac
accctgagggagggagaccacgcccgcttcctgcagacagccaaaagcatctgcgagaga
gtgtccatggcgacagcatcctctcagatcctgataccagagatcaacctgaatgacacc
tttgatacgtttgcgttggactttacaagggaaaagaaaatgctggaaggcttggattac
ctcacagcaccaaatcccccaataatccgggaggaattatgtacggcatcgtacgacacc
atcactgctcactggacatcagatgacgagttctgtgtggtctcctatgagctgcagtat
gccatcttcactggacaagccaatgtcgtcagtttgtgtaactcagctgacagttggatg
attgtgcccaacatcaagcagaaccactacacagtgcatggactccagtgtggcaccaag
tacatctttatggtcaaagctatcaaccaggcagggagtcgcagcagtgtacctgggaag
ctcaagaccaacagtcagccattcaagttggacccaaagtctgctcacaagaagctgaag
gtctcccacgacaacctgacggttgagcgagacgagacgtcgtccaagaagagccacaat
caggaccgcttcaccagccagggcagctacggcgtcactgggaatgtgtacatcgacagc
gggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggcgttgct
tacaagtcagcaccgaaacacgagtggatcggcaagaactcggcctcgtgggtattatct
cgatgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgagccgtcc
ccccacctgcgtcgcgtgggggtgttgctggactacgacgccggttccctggccttctac
gatggcgccggctcacagcacctgtacacgttcgacatcaccttcgctcagccagtgtgt
cccgtgttcaacgtgtggaacaagtgtctgactgttctcacggggctgcccatcccagac
cacctcgaggggacagactgccaggattaa
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