Oncorhynchus gorbuscha (pink salmon): 124044278
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Entry
124044278 CDS
T07892
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124044278
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124044278
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
124044278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
124044278
NCBI-ProteinID:
XP_046219876
LinkDB
All DBs
Position
LG09:complement(93656469..93889536)
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AA seq
1169 aa
AA seq
DB search
MKKFRKVLDGLSSSSQGAVASPSCSSAACTPPTPQNINVQETLLSENFHICKTVRHGFPY
QPTCLAFDPVQKLLAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALVTACA
DDTLHLWNFRQRRPAILHSLKFNRERITFCHIPFQSKWLYVGTERGNTHIVNIESFVLSG
YVIMWNKAIELATKAHPGPVVHLSDSPKDECKLLIGFESGTVVQWDLRAKKVDFRIYYDE
AIHSVSWHHEGNQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKEGRKESCKPILKVE
YKTSRNSNEPYVIFSGGLSYDKAGGRRPTLTIMHGKALTVLEMDHPIVEFLVLCDTPYSN
KIQDPYAVVLLLEKDFIMVDLTQSNFPIFENPYPMNIHESPVTCTAYYAECPPDIIPVLY
SVGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEVIVTGHADGTVRFWDASAITLQMLYKLK
TSKVFENPNAGDGRTVEQVEEDPYAIQMVRWCPQSRLFCVVGISAHVILYRFSKNDANAE
IVSLEVRLQFDPEDVISLSETDPCFSDPSSHSPQMPGSPSNGSQDSLHYRKVKSRPVRMP
PGYQAELVMQLQWVDREPPQQITSLDINSAYGLLAFGSCNGLVVVDYIQKTILMCVSTLD
LYGAADPYQRLTRSPRKNRQSTSDFCMRSLSHFYSDSKKRIRKSYQSLTELSDNQVSMDI
ERSKSPISDHVNGHCTSPTSQPCSLGKSRIPGAPEGPRLPRRGPGRPPFRKAQSAACMEI
SLPVSSLTEESRENSFSFSRSSSVSSISRDTKEAVTTLQFGESYGRKGDSLPTACLWAGT
SLGVVLLLPISIPTEKERLEEPVTMGPSGTVLMLKGSVLSFSFLDCGGTLIQSPYEVWRE
PNVPEDPDEPRRRKLVNLSPLSSQEACGDGHLAVVCSEKQAKVILMPTQAVLFTHNVTES
SFLLRADVVSVCNSVCLACFCANGHVMTLSLPSLRLLMDTNYFPLTDMRIARTFVFTNGG
QALYLSSPTEIQRIAYSQEMTDNLQDMLGELFTPIEAPEAQNQGFLKGFFGGNAQTFDRD
ELFGEAAAGKASRSLAQHIPGPMGLENVRAAAGGVVGDLARARIALEQRGERLGELEERT
TLMMKSAETFSTHAHQVMLKHKDKKWYQL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtactggatggcctgtcttcctcctctcagggggctgtcgcg
tccccgtcatgcagcagtgcagcctgtaccccgcccactccacagaatatcaatgtccag
gagacgctactctcggaaaactttcacatatgcaagacggtacgccacggcttcccctac
caacccacctgcctggcattcgaccccgtccagaagctcctcgccatcggctccagaaca
ggaggcatacgcatactgggccggcctggtgtggactgctacagccagcatgagagtgga
gccgctgttctccagctacagttcctcatcaatgagggagctctggtcacagcatgtgca
gatgacacactgcacctgtggaactttcgccagagacgcccagccatcctgcactcgctc
aaattcaacagggagaggatcacgttttgccacatccccttccagagtaaatggctgtac
gtgggcacagagcgtggcaacacacacatcgtcaacatcgaatccttcgttctgtctgga
tacgtcatcatgtggaacaaggccatagagttagcaactaaagcccatccaggacccgta
gtccatctgagtgacagcccgaaggatgaatgcaagttgctgatagggtttgaaagtgga
acagtagtacagtgggacctccgggccaagaaggttgacttcagaatctattacgatgaa
gctatccattctgtgagctggcaccatgaagggaaccagttcatgtgtagccactcagac
ggcagcttgacgatgtggaacctgaggaacacagccagacctattcagatcacatatcct
catgggaagatactgaaggaagggaggaaggagtcgtgtaagcccatcctcaaggtggaa
tacaagacctccagaaacagcaacgagccctatgtcatcttctctggcggtctgtcatac
gacaaggctgggggacggaggcccaccctgaccatcatgcatggcaaggcccttacggtg
ctggagatggaccaccctatcgtagagttcctggtgctctgtgacaccccatactccaac
aagatccaggatccgtatgcggtagtgctgcttctagaaaaggactttatcatggttgat
ctgacacagagcaatttccccatctttgagaacccataccccatgaacatccacgagtct
cctgtcacctgtacagcctactacgccgagtgccccccggacatcatcccagtcctctac
tccgtaggagccaagcagaagaagaccggctacagccacaaggagtggccagtgagtggc
ggtacgtggacattaggctcacagacctacccagaggttatcgttacaggacacgcagat
ggaaccgtaaggttttgggatgcatctgctattacgctgcagatgctgtacaagctgaag
acgtctaaggtgtttgagaaccccaatgcgggtgatggccggacggtcgagcaggtagag
gaggacccttacgccattcagatggtccgctggtgcccgcagagccgcctcttctgtgtg
gtgggcatctctgcccacgtcatcctctaccgcttcagcaaaaacgacgccaacgcagag
atagtgtctctggaagtgcgtctgcagtttgatccagaggacgtcatctccctgtcagag
acagacccgtgtttctcagaccccagttcccactccccccagatgcccggtagccccagc
aacggctcacaagacagcctccactaccgcaaggtaaagagtcgtccagtgcgcatgccc
ccggggtaccaggctgagttggtgatgcagctacagtgggtggatagagagcccccccag
cagatcaccagcctggatatcaactctgcctatggccttctagcgtttgggagctgcaat
ggtctagtggtggtggactacattcagaagaccatcctgatgtgtgtgagcacgttggac
ctgtacggagccgctgacccctaccaacgtctcacacgctccccacgcaaaaacagacag
tccacctcagacttttgcatgcgcagcctgtctcacttttattcagattccaagaaaagg
atccgtaagtcctatcagagcctaacggaactgtccgacaaccaggtgtccatggacatc
gagagaagcaagtcacccatctcagatcatgtcaatggacattgcactagccccacctcc
cagccatgctccttggggaagtctcgcattcctggggctcctgagggcccgcggctcccc
cggagaggccccggccgaccacccttccgcaaggcccagtctgccgcttgcatggagatc
tctttgccagtttcctccctcacagaagaaagcagagagaattcgttcagcttctcgcgg
agctccagtgtgtccagtatcagccgcgacaccaaggaagcggtgaccacgctgcagttc
ggagagtcctacggtcgtaaaggtgactccctgcccaccgcctgcctgtgggcgggcacc
agcctgggcgtggtcctcctactgcccatatccatccccacagagaaggagaggctggag
gagcctgtcaccatggggcccagcggtaccgtcctgatgctgaagggctcagtgctaagc
ttttccttcctggactgtgggggcacccttatccagagtccctacgaggtatggcgggaa
cctaacgtccccgaggaccccgacgagccccgcaggcgcaagctggtcaacttatccccg
ctgtcttcccaggaggcatgtggggacggtcacctggccgtggtgtgttctgagaaacag
gccaaggtcatcctcatgcctacccaggccgtcctgttcacacacaacgtcacagagtct
tccttcctcctgcgggccgacgtcgtctccgtctgcaacagcgtctgcctggcctgcttc
tgcgccaacggacacgtcatgaccctcagtttgcccagtctgagactcctaatggatact
aactactttcccctgacggacatgcgtatcgcccgtaccttcgtcttcaccaacggcggt
caagctctgtacctgagctctcctacagagatacaacgcatcgcatacagccaagagatg
acggacaacctgcaggacatgctgggggagctgttcactcctatagaagcaccagaggcc
cagaaccaaggattcctcaagggattcttcggaggcaacgcccagaccttcgacagagac
gagctgtttggggaggcagcagcgggaaaggcctctcggagcctggcccagcacatccct
ggtccaatgggattggaaaacgtgagggctgcagccggcggggtggtgggggacctggcc
cgagcccgcatcgccttggagcagagaggagagagactgggagagctggaggaacgcacc
accctcatgatgaaaagtgcagagacgttctcaacacacgcccaccaggtaatgctgaaa
cacaaggacaagaaatggtatcaactttaa
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integrated database retrieval system
