Oncorhynchus gorbuscha (pink salmon): 124044474
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Entry
124044474 CDS
T07892
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124044474
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124044474
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PRIMA1
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
124044474
NCBI-ProteinID:
XP_046220060
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All DBs
Position
LG09:90730197..90735448
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AA seq
909 aa
AA seq
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MRLPVICFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVEKGSKSNFRVLEN
SAPHLIDVDSESGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDVVDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGQNGIKTYQVTRDDYNTFSLDLKLRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPGYM
LELPENSPPGRMLIDVNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPKTGVIKIQGEI
DYEDNPTIEFDVQAMDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDIGQN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMEG
SATVRVSVLDVNDNLPVIVLPLLINDTVEIMVPGNVGLGYIVTTVRAVDQDHGESGRLTY
EIWEGNEEHLFEMDPVAGEVRTAHAVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKANT
GAMAAGESSASGEQQHWDMSLPLIITLCIISLMLLAVMTTIAVKSKHQDKEAGNYNCRMA
EYSNSNPPVGNGKKKRINKSDIMLVQSEVEERDSVSRMSVVSSPSLITSPICFDYQATSP
LPLTLPRSEVMYLKTTFNSLTVPRAGCHSSFAGLTTETPMDRMSVIQTDNFPSEPNNVAN
RQPFAQSSSTFKDAERASLRDSGHGDSDQADSDLDTNKGCACNTSARGALKMKATAVNGQ
PLDQEPPSV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcctgtcatatgtttccttctcttctgggctaaagcccggacactgaaaaat
ctaaattattctgttccggaggagcagggacctggaactgttatcggaaacattgctaag
gatgccggatttggaccggtggagaaaggaagcaaatcgaactttcgagttctggagaat
tctgctccacatctcattgatgtggattcggagagtgggctgctttttaccaaacagcgg
attgacagggagacattgtgcaaacgcaaccctaagtgtcagctctctatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgacaactcc
cccagtttcccttcagatcacatcaatattgatatttcagagaacgcagctgctgggaca
cggttccctttaacaattgcacacgactcagattctggacaaaacggaataaagacttat
caggtcaccagagatgattacaatacattttctttggacttgaaattgagaggtgatgga
accatatatcctgaattggtggttcagcgccctctagatagggaagatcagtctcatcac
accctccttttgacagccattgatggaggggagtatccaagatcagggtccatgcaaatc
aatgtgagagttactgattcaaacgataatagcccagtatttgacaaacccggctacatg
ctggagcttcctgaaaactcaccgcctgggagaatgctgatagatgtgaatgcaactgat
caagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatccgataga
gtccaagagttgttttctattgatcccaaaacaggtgtcattaagattcagggagaaatt
gactatgaggataatccaaccattgaatttgacgtgcaggccatggacctggggcctaac
cccatacctggccattgtaagatttcagtcaaagtgcttgacaagaatgataactggccc
gttataagttttgtctccgtccgccagggagcgatcagtgaggcagcgcctccagaatct
gtcatcgccctggtgagagtcactgataaggattctgggaggaatggccagctccagtgc
agggtgcttggcaatgtaccattcaggctgcaggaaaacaatgataatttttacactctg
ctcacagacagacctctagacagggaactgaaagacgaatataatgtgaccatagtggcc
agagacaacggaataccctcgttgaattacaccaaatcgtttacagtgaaaatcttagat
gagaatgataatgcaccgcgtttcaccaagacagtgtatgtgctccaggtgcctgagaac
aacatcccaggggagtacttaggctcagttctggctcatgatccagatataggtcagaat
ggaactgtgtcttactccattttaccgtcgcacatcggagacgtgtcagtttacacctac
gtgtctgtcaatcctaccaacggagccatttacgcctcaaggtctttcaactacgaacaa
actaagttctttgagttcaaagttcaagctaaagacgcagggtctcctcatatggagggc
agtgccacagtcagagtcagcgtgcttgacgtcaatgacaatctaccagttattgtatta
cccctcctgataaatgacactgtggaaatcatggtccctggaaatgtaggtctggggtac
atagtgaccacggtgagagcggtcgatcaggaccacggggagagcggtcgtctgacctac
gagatctgggagggtaacgaggagcacctgtttgagatggaccctgtggccggcgaggtg
aggactgcccatgctgtgtgggaggacgtggccccagctgtagagctggtagtgaaggta
accgaccacggcaagcccccactgtctgccgtggctaagctgatcattaaggccaacaca
ggagccatggcagcaggggagtccagcgccagcggggagcagcagcactgggacatgtcc
ctgcccctcatcatcaccctctgcatcatctccctcatgctcctggctgtcatgactacc
atcgccgttaagtccaagcatcaagataaggaggctgggaattataactgccgtatggcc
gagtactccaactccaatcccccggttggaaacggcaagaagaagaggatcaacaagagc
gacatcatgttggtgcagagcgaggtggaggagagggactccgtgagcaggatgagcgtg
gtgagcagcccgtctctcatcacctcacctatctgtttcgactaccaggcgaccagcccc
ctgcctctcacgctgcccaggtcagaggtcatgtatctgaaaaccactttcaacagcctg
acggtacctcgggctggctgtcactcaagctttgcggggcttaccacagagactcctatg
gatagaatgtcagtgatacagacggataattttccttcggagccgaataacgtggccaac
aggcaaccatttgctcaaagcagctcaacttttaaggatgcagagcgagcgagcctccga
gacagtggccatggtgatagtgaccaggctgatagtgacctggatactaataaaggctgc
gcctgcaacacatctgccaggggggccctcaagatgaaagccacagcagttaatggccag
cctcttgaccaggaaccgccctcggtgtaa
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