Oncorhynchus gorbuscha (pink salmon): 124045274
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Entry
124045274 CDS
T07892
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124045274 (msh4)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124045274 (msh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND_NTPase5
nSTAND3
AAA_21
ATPase_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
124045274
NCBI-ProteinID:
XP_046220522
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All DBs
Position
LG10:complement(71473084..71479517)
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AA seq
906 aa
AA seq
DB search
MLRSSTEELTPGNTTDSGRSSVLSPLDHRGGQSGPVSLGRGSTSAGLLTRVIHSFRGGRT
SSSVPPSSGSSFCGTPRLMGGTPRLGRTPGLAGALGIHPAWTPQTEPSVTTSCSSVTSTT
AASVIVAVVEGRGLARGEIGMASINLKCPELVLYQFADTGTYAKVITKLHILVPLEILMP
DTASEKGKGTKLYSLITENFQSVAFTAIQRKYFNERKGLEYIQQLSAPEYSTVIMEVQAK
YYCLAAAAALLKYFEFIQNSIYAPKSLKVSFKGSEHTAMIDSASATNLELVVNNRDHRSE
HTLLGVLNYTKTPGGGRRLRSNILEPLLDVDTINIRLDTIQELLQDEELFFGLKNAIGHF
LDIDQLLSVLVQIPKQETVQVAESKITHVIQLKHTLELVPPLRMVLKNCNTALLKAYSSS
LEDNRFDMILEQIKSVINDDTSYMKGSLNMRTQKCYAVRPNINEFLDIARRAYTEIVDDI
AGLVAQVGEKYGLPIRTSFSTARGFFIQMKLEGVALPDGELPADFIKVTKHKNNYSFTTA
DLMKMNDRCDEALREIFHMSYVVVCQLLHTVHEHIHCLYKLSDAVSMLDMLLSLANACTI
SDYVRPEFTDTLAIKQGRHPILERIVGQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQ
VALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMVEMKEVSYLIHNVSD
RSLIIIDELGRGTSAEEGVGICHSVCEFLLSLRAFTLFATHFLELCELETLYPNVENQHM
EVQHTRTGDTGTERVIYTFLLSRGSSEERNYGLRAAEMTALPSTIIQEAKAISSKVSQQL
LAKHHSDPETQRQRAVYHLATRLLQTARNSRLDPDSLRIYLKGLKRHYEAELQVIGEPVS
METEEE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaagtagcacagaggagttgacacctggcaacaccacggactccggaagaagc
tcggtgctgtcacctttggatcatcgaggcggacaaagtgggcctgtgtcactcggtcgt
ggatcaacatctgcagggctgctcacaagagtgattcacagcttcagagggggaaggaca
agttcatctgtcccaccatccagtggctcctcattctgtgggacccccagactcatgggg
gggacccccagacttgggaggaccccaggcttagctggggctctaggcatacaccctgca
tggacgccacagactgaaccctctgtgaccactagctgctcctctgtgacatcgaccact
gctgcctctgtgattgtggcggtggtagaagggcgtgggttggccaggggggagattggc
atggccagtatcaacctgaaatgcccagagctggtcctctatcagtttgcagacactggg
acctatgccaaggttatcaccaagcttcacatcctggtgccactcgagatactgatgcca
gacactgccagtgagaaaggcaaagggaccaagctatacagcctaatcacagagaacttt
cagtcagtagctttcactgcaatccagagaaagtacttcaatgagagaaaagggttggaa
tacatccagcaactgtctgcaccagagtacagcactgttattatggaggtgcaagctaaa
tactattgcctggcagctgcggctgctttactgaaatactttgagttcattcagaactcc
atttatgcaccaaagtcactgaaagtaagcttcaaagggagtgagcatactgccatgatc
gactcagcgtctgccactaacctggagctggttgtcaacaacagggaccacaggagtgaa
cataccctgttaggggttctgaactacaccaaaacccctggtgggggaaggaggctgcgt
tctaacattctagagcccttgctggatgtcgataccataaacatacgtctagacaccatt
caagagctgttacaggatgaggagctcttctttggcttaaagaatgccattggacatttt
ctggatatagaccaactgctctctgttcttgtccagatccccaagcaggaaacggttcaa
gttgcagagtcaaagatcacacatgtgattcagctgaagcatactctggagttggtacca
ccactgaggatggtgctgaagaactgtaacactgctctgctgaaggcttacagcagctca
ctggaggacaacaggtttgacatgatcctggagcagatcaagtcagtgattaatgatgac
accagctacatgaaggggagcctcaatatgcgcacacagaagtgctacgctgtgcgcccc
aacatcaacgagttcctggacattgcccggcgagcctacactgagattgtggatgacatt
gcagggctggttgcccaggtgggggagaagtatggcttgccgatacgcaccagcttcagc
acagctcgaggcttcttcatccagatgaaactggagggggtagctttacctgatggggaa
ctcccagctgacttcatcaaggtgacgaagcacaagaacaactacagcttcaccacagca
gacctgatgaagatgaatgatcgctgtgatgaggccctgagggaaatatttcacatgtcc
tatgtagtggtgtgtcagctgctgcatacagttcatgagcatatccactgtctttacaaa
ctgtccgatgctgtgtccatgctagacatgctgctgtcactagccaatgcatgcaccatc
tcagactatgtgcgtcctgagttcacagacacactggccatcaagcagggtcgtcacccc
attctggagcgcatcgttggccagcagcccgtgtccaacaacagctacatctctgagggc
agtaactttgtcatcatcactgggcccaacatgagtggcaaatccacctacctcaaacag
gtggcgctgtgccagatcatggctcagataggctcctttgtccctgctgagtatgcctcc
ttccgcattgctgaccagattttcaccagaatcggggtggatgatgactttgagaccaac
tcctcaacctttatggtggaaatgaaggaggtctcatatttaatccataatgtgagtgat
aggtctctcattatcatagacgagcttgggcgtggtactagtgctgaggagggtgtcggc
atctgtcactctgtctgcgaattcctccttagcctcagggcgttcacgctgttcgccaca
cacttcctggaactatgtgagttggagacattgtaccccaatgtggaaaaccagcacatg
gaggttcagcacacccgcactggtgacacgggtacagaacgtgtcatctataccttcctg
ctgagccgtggaagctctgaggaaagaaactacggtctgagggctgcggagatgactgca
ctgccttcaaccataatccaagaagcaaaggcgattagctctaaagtcagccaacagctt
ttggccaagcaccacagtgatccggaaacgcaacggcagagagcagtgtaccacctggcc
actcggctcctgcagacagccaggaactccaggctggaccctgacagcttacgcatctat
ctgaagggcctgaagagacactatgaagcagagctgcaggtcataggagagcctgtgtcc
atggagacagaggaagaatga
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