Oncorhynchus gorbuscha (pink salmon): 124045309
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Entry
124045309 CDS
T07892
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
EMP70
Motif
Other DBs
NCBI-GeneID:
124045309
NCBI-ProteinID:
XP_046220567
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Position
LG01:88455169..88490757
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AA seq
758 aa
AA seq
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MAVPSLSAPLLVALFQLAVLPLVHAGVYYGHKQHQQHPQQQPQQHQPMPHLSHMGMGSKE
QHHQQQWPGKDIPHMQYPHYRKEIPQMPMHMGKDYPRKGVVVNSGQDKGQTIPSGAVGGL
PGGLPGEQGPAGPAGPEGPSGPPGPPGVGQPGGEGKPGSAGPPGFPGVGKPGLPGIPGKP
GSMGDPGVPGELGPSGGHGHMGQPGPQGPPGPPGLPGIGKPGVGGLPGQPGPKGEPGHKG
LPGLPGLPGPKGDKGIGQPGQPGHKGPAGPPGPPGQGGMPGVGKPGMNGISGPPGGPGKP
GPPGEQGLAGPAGEGGETGPPGLPGQGKPGQNGLPGQPGMPGGKGHPGPPGLPGKPGLPG
FGKPGFPGPKGDKGMGGMPGGPGPKGDKGHGGLPGVIGPPGPIGPAGPLGPMGPPGGLGQ
PGTKGDAGEGGQKGLPGGQGEPGPPGLHGQNGFPGEVGEPGPRGPAGPVGPQGEGGHKGL
PGAPGIPGLSGPKGEGGLPGEKGPQGPKGIPGLGGAGGPIGPPGAPGSKGDSGLPGLPGV
EGNGNPGVPGPLGPPGKEGPGGPPGNPGQPGLPGPPGPPGPPTLSPNMGAVLTEMGIPPV
LDGVKTTGYGKKGKYGGNSGEVMGNGLEMPAFTALVTTPFPPVGTPVVFDKILYNGRQNY
NPQTGVFTCDMPGIYYFAYHVHCKGANVWVALMRNDEPVMYTYDEYKKGFLDQASGSAVL
PLQPGDTVYLQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgccttctctctcagcccctctcctcgtggctctgtttcagcttgcagtacta
cctctcgttcacgcgggggtatactacggacacaagcagcaccagcagcacccccagcag
caaccccagcagcaccagcctatgccacacctgtcccacatgggcatgggcagcaaagag
cagcaccatcagcagcagtggccaggaaaggacattccccacatgcagtacccccattac
agaaaagagatcccccagatgcccatgcacatgggcaaggactacccccgcaaaggtgtg
gtagtcaacagtggacaggacaaaggtcagaccatccccagtggggctgtgggaggtctc
cctggaggtctgccaggagagcagggcccagctgggcctgcaggacctgagggaccctct
gggccaccaggtcctcctggggtaggacagccaggaggtgaaggaaaaccaggctccgct
ggtcccccaggattccctggtgtaggcaaaccaggactcccgggaattccaggcaagcca
gggagcatgggagacccaggtgtacctggagagctgggccccagtggcggacacggtcat
atggggcagccagggcctcagggcccccctggtcctccaggtctcccggggataggaaaa
ccaggggttggggggttaccaggacaaccaggacccaagggggagccaggacataagggc
ctaccgggactaccaggattaccaggacccaagggtgacaagggaattggacagccagga
cagccaggccacaaagggccagcaggaccccctggacctccaggccagggagggatgccc
ggtgtgggcaagcctggaatgaatggcatatcggggccaccaggaggaccagggaaacca
ggccctcctggagagcaggggctggctggaccagcaggagagggtggcgagaccggtcca
ccagggttgccaggccagggaaaaccaggccagaatggtctgcctggacaaccaggcatg
cctggtgggaaagggcacccaggccctccaggtttgccagggaagcctggattgcctgga
tttggaaaaccaggattcccaggacccaagggagataaagggatgggtgggatgcccgga
ggcccaggaccaaagggagacaaaggccatggaggacttccaggtgtgattggaccacct
gggccaatcggaccagctggtccccttggccctatgggaccccctggaggtcttggccaa
ccagggacaaaaggagatgctggagagggagggcaaaaggggctgccaggtggccagggt
gagcctggtcctcctggacttcatggtcagaatggcttccctggagaggtaggagagcca
gggccaaggggtcccgctgggcctgtaggaccccaaggggaaggcggacacaaagggtta
ccaggcgcccctggcattccaggcctatctgggccaaagggagagggaggacttccagga
gagaagggtccccaaggccctaagggcattccaggtctgggaggtgcaggtgggccgatc
ggacctcctggtgcccctgggtctaaaggtgacagcggattacctggtcttcccggcgtt
gagggtaacggaaacccaggtgtccctggtcctcttggacctccaggtaaagaaggtccc
ggaggaccaccaggaaatccaggccagccaggtctacctggtcccccaggcccacccgga
ccccccaccctctcccctaacatgggagcagtcctcactgagatgggtattcctcctgtg
ctggatggagtcaagaccaccggctatggcaagaaggggaaatatggaggaaacagtgga
gaagtaatgggtaacggcctggagatgcctgcgttcacggctctggtgaccacacccttc
ccaccagtgggcacgcctgtggtgttcgacaagatcctgtacaacggccgtcagaactac
aacccccagacaggcgtgtttacctgtgacatgcccgggatctactactttgcctaccac
gtccactgcaaaggggccaacgtgtgggtggcgctgatgaggaacgatgagcctgtgatg
tacacatatgacgagtataagaagggattcctggatcaggcgtcggggagcgcagtgttg
cctctacagcccggggacaccgtgtacctccagctaccctcggaccaggccgcaggacta
tacgctggccaatacgtccactcatccttctctgggtacttgttgtaccctatgtag
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