Oncorhynchus gorbuscha (pink salmon): 124045342
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Entry
124045342 CDS
T07892
Name
(RefSeq) vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124045342
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124045342
Membrane trafficking [BR:
ogo04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
124045342
Other autophagy associated proteins
Micronucleophagy
124045342
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124045342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
ZER1-like_2nd
Cnd1
V-ATPase_H_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
124045342
NCBI-ProteinID:
XP_046220599
LinkDB
All DBs
Position
LG10:complement(88480770..88490826)
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AA seq
532 aa
AA seq
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MATGICEKCAQLLKDFVAYVKRLRSELVQKITECIKNLSRCSCLRRKRATVASYISEQHE
RQAARTLLNHLDTVDYPLPVALLEPYTALLLSNDIEVQRITTLSLVHLLVNNKVSKEQVI
ETGMLMPLLEMLQSGDPTVQCNSCQCIASLASSDSNREAIVSAEGVIPLLVLAKSYDPQV
QQNAVWALLNLTQSERTMGVLCQEGAIPVLALLLQSSNYEVQFYSCSALSNIATVPGHHP
KMLGIGDRFLLKSLLTLMSSSVQKNASQACRCLQILSGNVVTQEQLMYLNCVLPLKALLC
SATPPLTESAIALLSELATHQPNREGLVNEGLVQVIGQLLLCHRSSSIINHSVVTITNLS
STSEGPQAVMDSVCVTGLLKALVSSVTSEETVLCVTSCLHHLTSWDLLQSHLATKMTPEH
VSSLVKFSAQMDNLELSYRSASIISKLKMNEHVIQLLTPHYAAISEYLLMYLKNQEVRFQ
QLSIVTLCNLKKDGEFSVLMSDSVLEKQLKWVHAQTEQTRQLLQAIQMPPSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggaatatgtgaaaagtgtgcacaactgctaaaggacttcgttgcttatgta
aagagattgcggtctgaacttgtacagaagataacggagtgtataaagaacctgtcaaga
tgtagctgtctgcggaggaagagagcaactgttgcatcctatatctcagagcagcacgag
agacaggctgctcggacactactgaaccacctggacacagtggattatcctctacccgtt
gctctcctggagccatacacagccctactgctctctaatgacatagaggttcagaggatc
accactctgtctctggttcatctgctagtgaacaacaaagtgagtaaggagcaggtgatt
gagacagggatgctgatgcccctgctagagatgctccagtctggggaccccactgtccag
tgtaactcctgccaatgtattgcctcactggcctcctcagactcaaaccgggaagctatt
gtgtcagctgaaggggtgattccactactggttttagccaagtcttacgatccccaagtc
caacagaatgcagtctgggcccttttaaacctcacacagtctgagaggacaatgggagtg
ttatgtcaagaaggagccattcctgtactggcacttctgttgcagtcctccaactatgag
gtccagttctacagctgctctgccctgagcaatatagccactgtcccgggccatcatccc
aaaatgttgggcattggagaccgttttctgttgaagtctctgctgacactcatgtcctca
tcagtgcagaagaatgcatcccaagcttgcagatgcctccaaatcctttcagggaatgtt
gtgacccaggagcagctgatgtacctgaactgtgtgttgcctctgaaggccctgctgtgc
tccgctactccccctctgactgagtctgctatagcactactgtctgagctagccacacac
caacccaatagagagggcctggtgaatgagggcctggtacaggtgatagggcagctgctc
ctctgtcacagatccagctccatcatcaaccacagtgttgttaccatcaccaacctcagc
agcaccagcgagggaccgcaggctgttatggacagtgtgtgtgtaacaggacttctcaag
gcccttgtgtccagtgtgacctcagaggagaccgttctgtgtgtcacttcctgtttacat
cacctgacaagctgggacttacttcagtctcatttggccacaaaaatgactcctgaacat
gtttcaagtctggtgaagttctctgcacaaatggacaatctagagctgtcctataggtct
gcttccatcatcagcaaactaaagatgaacgaacatgtcatccaactactgacgccacac
tacgctgccatctctgaatatctcctgatgtacctcaagaaccaggaagtgcgattccaa
cagctgagtattgttactctatgcaacctgaagaaagacggagagttttcagtgctgatg
agtgatagtgtgctggagaagcagctaaaatgggtgcatgcacagacggagcagaccagg
cagttactgcaggcgattcagatgcctccatcctcctga
DBGET
integrated database retrieval system
