Oncorhynchus gorbuscha (pink salmon): 124045456
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Entry
124045456 CDS
T07892
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
ogo04980
Cobalamin transport and metabolism
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124045456
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124045456
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124045456
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124045456
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124045456
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124045456
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124045456
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
124045456
HMT complexes
COMPASS/SET1 complex
124045456
MLL-HCF complex
124045456
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124045456
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124045456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
Motif
Other DBs
NCBI-GeneID:
124045456
NCBI-ProteinID:
XP_046220715
LinkDB
All DBs
Position
LG10:complement(3430343..3495484)
Genome browser
AA seq
1589 aa
AA seq
DB search
MASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ
WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP
KNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWD
IPITYGVLPPPRESHTAVVYTEKSRLVIYGGMSGCRLGDLWILDIDTLTWNKPSINGTAP
LPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWESVLLD
SLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPSRVQL
VRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAPAATTTGVSPATPLPVNSSPKSPVSAS
AVSAQGHPLQGITLVPSMPGSPVPARGPAILKVSAPQSTTGASIVTVRQANQGGKSPVMV
TSLPAGVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATIVK
TVAMSPGAQTVKVASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITVHKSGTVTV
AQQHQVVTTVVGGVTKTITLVKSPLTLGGGGTLLTAANQGQNKVMSGKDVQHWLSNLSNL
GKVMSVVQTKPGQTGAVTGQAGSSLQHILQTKGPLPAGTILKLVTSADGTPTTIITTSKA
GATVGGKPTILSYSSMPTSTSKPGTHIIKTIPMSSIGQTGVTGSGMKSPITIITTKMMTP
GTGTPGKIISAMPRTGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPN
VTTLVVKGTTGVTSLGTVTGTVSTSLAGGSVATVAPITTLGTMTTLPGQVTVSAAQAGGQ
AGGQATQVTLITSPSGVEAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPC
ETHETGTTNTATTASANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQVQQVCTN
PPSETHDTGTTNTQTTASCNMGSNQQQQGSNQQQQGSNQQQQGSNQQQQGSNQQQQGSSV
TNSCGSDPPSSPPSSSGDLSPSSVSGTSSVPGVLRPETLRTGTTYTSTTARSNMGSDQMG
MTLSSSSSDNQSKSSSGGGGGSPLTSPVCSNPPCETHETGTTNTPSQTTSNLTGTGTVQR
VCSNPPCETHETGTTNTPSQTTSNLTGTGTVQRVCSNPPCETHETGTTNTATTAQPGDST
QGDNGTQEAPSSSSATTESSASTTSGRAVTTVTQSTPTPGPCVPEISSMSGSSEAVASRA
EEEEEAMQTDSLPEGTVRVVTLEEAAAAGIQVHMEEQNQGEQEGLPAELMSEGGSGGQQT
LMVTGLTPEELAVTAAAEQAAQHAATEEAQAKAIQAVLQAAQHAVMNEGDGGHHTTTIPI
VLTQAELAALVQQQQQLQEAQALAQAQALAQAQALAQAQALAQAQALAQAQALAQAQAAA
AQHNQAAAQHNQPTEGLAPADSLNDPASESNANELAAAVTQAAARLAPSCTLTPTQTMMV
TSPAKIQAATTMAEVVNGIESAAGVSGLD
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggctcagtcctgcagccacggtggaagcgggttttgggttggtccggtcct
gtcccccggccccgacatgggcaccgtgcggttgcaatcaaagaattgatggtcgttttc
ggggggggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaaccag
tggttcattcctgctgtccgtggtgatatccctcctggttgtgctgcgtatggttttgtg
tgcgacggcaccaggctgctggtgttcggagggatggtggagtacggcaaatacagcaac
gatctgtatgaactgcaggctagccgctgggagtggaagcgtctgaaggccaagtctcct
aagaacggccctcctccctgtccccgtctgggccacagcttctccctggtagggaacaaa
tgctaccttttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga
tacctgaacgatctgtatacgttggagctgcgtgccggctccagtgtggttggctgggac
atccccatcacctacggggtgttgcccccgcccagagagagccacaccgccgtcgtctac
acagagaagtcccgtctggtcatctatggaggcatgagtggttgtcgtctgggggatctg
tggatcttagacatagacaccctcacatggaataagccctcgatcaacggaacagctcct
ctccctcgcagtctccactctgccacaactatcaccaacaagatgtacgtgttcggaggc
tgggttcccctggtgatggatgacgtcaaagtagcgacacacgagaaggagtggaaatgc
accaacacactggcctgtctcaacctagactcgatggtgtgggagtcagttctactggac
tctctagaggataatatccccagggcccgagctggacactgctccgtggccatcaactca
cgtctgtacgtctggagcggacgggacggctaccgcaaggcctggaacaaccaggtgtgc
tgtaaggacctctggtacctggagacagagaagccccgccccccgtcgagggtgcagctg
gtgagagctaacaccagtagcctggaggtgagctggggggcggtacctactgcagacacc
tacctgttacagctgcagaagtacgatatcccccccgccccggccgccaccacgaccggc
gtcagccccgcaacgccactgccagtcaattcctcccccaaaagccccgtctcggcctcg
gcagtgtccgcccagggccaccctctccagggcatcaccctagttccctccatgcctggg
agtccagttcctgctcgcggaccagctattcttaaggtgtctgctccccaatccaccaca
ggcgcctccatcgtcacggtgagacaggccaaccagggcgggaaatcccctgtcatggtt
acatcacttcctgctggggtccgaatggtggtgccggcccaggtcgcacagggaacccca
atgggcagcagccctcagatgagtggcatggctgcgttggctgcagcagctgcggccacc
cagaagatcccgccctccacggccaccatgcagctgccagccggtgccaccatagtcaag
acagtagccatgagccctggcgcacagactgtcaaagtagcttcgcctgttatgattagt
aacccagctactcgcatgctgaagactgctgcggctcaggtgggcacgtcaggtgtcgcc
acacccggaacgcccaatcggccaatcatcaccgtgcacaagtccggcacggtgacagtt
gcccagcaacaccaggtggttaccacggtagtgggaggagtcaccaagaccatcactctg
gttaagagtcccctcactctggggggaggtggcacgctgctgaccgcggccaaccagggt
caaaacaaagtgatgtctgggaaggacgtgcagcattggctgtctaacctgtccaacctg
gggaaggtgatgtccgtggtccagaccaagcctggtcagacaggagcggtgacgggacag
gctggctccagcctccagcacatcctacagacgaagggtcctcttccggcgggtactatc
ctgaagctggtgacgtcagccgacggcacgcccaccaccatcatcaccacttccaaggcc
ggggccaccgtagggggcaagcccaccatcttgtcctacagcagcatgcctacctccacc
tccaagccgggcacccacattatcaagaccatacccatgtcctccatcggacaaactgga
gtgacaggaagtggtatgaagtcccccattaccatcattaccactaagatgatgacacca
ggcaccgggacaccaggcaagatcatcagcgcaatgcccagaactggggctggtcagcag
ggactcacacaggtggtgctgaagggtgccccaggacagcccggaactattttacggact
gtccccatgggaggtgtacgtctcgtctccccggtaacggtttccggtgtcaaacctaac
gtcaccaccctggtcgtcaagggaaccacaggtgtgacttcgttgggtacggtgactggc
acagtgtcgaccagcctggcaggaggaagtgttgccaccgttgctcctatcaccaccttg
ggcaccatgacgaccctgcctggacaggtcactgtctccgcagcacaggcaggaggccag
gcaggaggccaggccacccaggtgaccttaatcacttcccctagcggtgtggaggcgcag
cctgtccatgaccttcctgtctccatcctgtcgtcccccacctccgccgacccctcctcc
acccagcctgaggcaggcgacccaggcaccgtgaccctggtctgctcaaatcccccttgc
gagacccacgagaccggcaccaccaatacagctaccacggcctccgctaacatgactggt
aatggtggggtggagagggtgtgttcaaacccgccgtgtgaaacccacgagaccggcacc
accaacactcaaacgacagcgtcctccaacatgggccaggtacagcaggtgtgcaccaat
ccaccgtcagagacccacgatacaggtaccaccaacacccagaccacagccagctgtaac
atgggctccaaccagcaacaacaaggctccaaccagcaacaacaaggctccaaccagcaa
caacaaggctccaaccagcaacaacaaggctccaaccagcaacaacaaggctccagcgta
acaaacagctgcgggtctgaccccccgtcctctccgccctcctcctccggagacctctcc
ccctcgtctgtttctggtaccagctctgtgcccggggtgctgcgaccggagactctgaga
acagggaccacctacacctccaccaccgcacgctctaacatgggctctgatcagatgggg
atgaccctcagctcctcgtcctcagataaccagagcaagtcatccagtggaggaggagga
ggatcccccctcacatctcctgtctgctccaatcctccgtgtgaaacgcacgaaacgggg
acgaccaacaccccgtctcagactacgtccaacctgacagggacgggcacggtccagagg
gtgtgttccaatccaccgtgtgaaacgcacgaaacggggacgaccaacaccccgtctcag
actacgtccaacctgacagggacgggcacggtccagagggtgtgttccaatcctccgtgt
gaaacgcacgaaacggggacgaccaacacagctaccacagcccagcctggagactcgaca
caaggagacaacggaactcaagaggctccctcgtcgtcctcggcaaccaccgagtccagc
gcatcgacgacatctggcagagccgtcaccacggttactcagtccacgcccacacctggg
ccctgcgtacctgagatctcatcaatgtctgggtcgtccgaggcggtggcatcgagggct
gaagaggaagaggaggccatgcagaccgactctctcccagagggcacagtgagggtcgtg
accctggaagaggctgctgcagctgggatacaggtccatatggaggaacagaaccaaggg
gagcaggagggtctgcctgcggagctgatgtctgaaggtggctcggggggccagcagacc
ctgatggtgacgggtttaacccccgaggagctggctgttaccgctgcagccgagcaggca
gcacaacacgctgcgactgaggaggcccaggccaaggccatacaggctgtcctgcaggcc
gcacagcacgctgtcatgaatgaaggagacggtggccatcacaccaccaccatccccatt
gtgttgactcaggctgagctggcagccctggtacaacaacagcagcagctgcaggaggcc
caggctcttgctcaggcccaggctcttgctcaggcccaggctcttgctcaggcccaggct
cttgctcaggcccaggctcttgctcaggcccaggctcttgctcaggcccaggcagcagca
gcacaacacaaccaggcagcagcacaacacaaccagcccaccgagggcctggccccggca
gacagcctgaacgacccagcgtcagagagcaacgccaatgagctggctgccgcagtgacc
caggctgcggcccgattggctccgtcctgcaccttaacccccactcagacaatgatggtg
accagcccggctaagatacaggcagctacaaccatggcagaggtggtcaatggaatagag
tctgctgctggggtgagtggattggactag
DBGET
integrated database retrieval system
