Oncorhynchus gorbuscha (pink salmon): 124045485
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Entry
124045485 CDS
T07892
Name
(RefSeq) RNA-binding protein 15-like
KO
K13190
RNA-binding protein 15
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124045485
03041 Spliceosome [BR:
ogo03041
]
124045485
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
124045485
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124045485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
124045485
NCBI-ProteinID:
XP_046220761
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All DBs
Position
LG10:7229023..7233007
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AA seq
864 aa
AA seq
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MKGKERSPIKKRSRALDDIRDRGGGHPPSKKMRAISVSSGSNNGNSSTKSDGGSTRRSLL
GDKRGRDFDGHVSSRTGGSNHSYPVAAATSTGKNHNLGLTLDLAAARTNARGERVPPPPN
NNESEYKTLKISELGTQLSDEDIEDGLFHEFKKFGDVSVKISRSNDERIAFVNFRKPEDA
RAAKHARGRLVLYDRPLKIDAVYINRRRSRSPVERVDRDPYVGAPGHRHLHTQRPLSPSV
LGYRDYRLQQLALGRLPPPPPPPLPRDLEREREFALFEARVRPGPAFIVERASAFRDEDF
ISPEDDQRANRTLFLGNLDITVTETDLRRAFDRFGLITEVDIKPTRGQTSTYGFLKFENL
DMAHRAKLTMSGKIVGRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI
DYRKGDTWAYIQYESLDAAQAACTHMRGFPLGGPERRLRVDFADTEHHYQQQFLQPLPLP
SFDMVAEAFIHRAIAEPLRDRTPPLLHFRERELGFPGAEWPPIPAMRERVRPGTFEPLER
DRRPGGREPWSLERELAGRGCDPRRKRHLMDDGRHLDVSPDSTDRTARRHRGGPTPDGSP
NGGRFSDSERTPRGGDDRPSPGRDRRLSLEHPGGGDRRLKSQGSLAERGASSSGLSSSAG
ERKRKAGDSSSKGPGAKRDRSSDQGGSKGSQSSKLSLAWHGMLLLKNSNFPANMHLLEGH
QGVAKDLLVDGPTGRQVGELKITQRLRLDQPKLDEVSRRIKAAGPGGYAVLLAVPGSGGE
EVSSTDPAASTQRPLRNLVSYLKQKQAAGVISLPVGGSRDKDHQGVLHAFPPCEFSQQFI
DASAKALAKTDEDYLVMVVVRGPS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaagaaaggtcaccgattaaaaagcgttctcgggctttggatgatatccga
gacaggggaggaggccacccgcccagcaagaaaatgagggctatctcggtttccagtggg
agtaataatgggaatagctcgactaaaagtgacggaggatctacgagaaggagtttgttg
ggtgacaagagaggccgggattttgatggacatgtatcgagtcgaaccggtgggagtaac
catagctatcccgttgctgctgcaacctctaccggtaagaaccacaacctgggtttgaca
ctcgatttagccgcggcaaggactaatgctcgcggcgagcgtgttccgcctccacctaac
aacaacgagagtgagtacaaaactctcaaaatcagtgaactgggcacccagttgagcgat
gaagacatagaagatggacttttccacgaattcaaaaaattcggggacgtgagtgtcaaa
ataagccgcagcaacgacgagagaattgcgtttgtcaacttcagaaagcccgaggatgcc
agagctgctaaacacgcccggggtaggttagtactttatgaccgacctctgaaaatcgat
gcagtgtacattaacaggaggagaagccgttctccagttgagcgagttgacagagaccca
tatgttggagccccaggccacagacacttacacacccagagacccctctccccatctgtg
cttggatacagagactacagactacagcagctggcccttgggcgcctccctcctccccca
ccccctcctttgcccagagacctagagcgggagagggagtttgccctgtttgaagccagg
gtgcgcccaggtccagctttcattgtagagagagcttctgctttccgcgatgaggatttt
atctccccagaggatgaccaaagagctaacagaacactgtttctgggcaacttggacatc
actgtcacagagacagacctgagacgggccttcgacaggtttgggttgataacagaggtg
gatattaagcccacacggggacaaaccagcacatacgggttcctcaagtttgagaatctc
gacatggcccaccgcgccaaactcaccatgtctgggaagatagtgggccgtaaccccata
aagattggctatggtaaggccacccccaccacacgcctatgggtgggtgggctcggaccc
tgggtccccctagcagcattggccagagagtttgaccgctttggtacaataaggaccatt
gactacagaaagggggacacctgggcttacatacagtacgagagccttgacgctgctcag
gctgcgtgcacgcatatgcgtggcttccctctgggggggcccgagaggagactcagggtg
gactttgcagacacagagcaccactaccagcagcagttccttcagcctcttcctctaccc
tccttcgacatggtggcagaggctttcatccaccgcgccatagctgagcccctgagggac
aggactccaccactgctccacttcagagagagagaactgggtttccccggggccgagtgg
ccccccatcccggctatgcgtgagcgggtacgtcccgggacctttgagccgctggagcgg
gaccggcggccgggagggagggagccctggtctctggagcgagagctggcagggcgcggc
tgcgacccaagacggaaacgacaccttatggatgacggtcgccatcttgacgtctctcct
gacagcactgaccgcacggcacgccgacaccgagggggtccaaccccagatggtagcccc
aacgggggccgcttcagtgactcagagcgtacccctcgtggcggcgacgacagaccctcc
cctggacgagaccgtcgcctcagtctggagcatcctggcgggggggacaggagactaaag
agccaggggagtcttgccgaaagaggggcctccagcagtggcctctcatcctcagcaggg
gagcggaaacgtaaagccggcgacagcagcagcaaaggacccggagctaagagggatcgc
tcctcagaccagggcggctctaaaggcagtcagtcatccaagctgagcctggcctggcac
ggcatgctcctcctgaagaacagcaacttccccgccaacatgcacctcctggagggtcac
cagggcgtggccaaggacctcctcgtcgacggccccactgggagacaggttggggagctc
aagatcacccagcgtctccgcctcgaccagcccaagctggacgaggtctccagacgcatc
aaagcggccggccccggcggctacgccgtcctcctggcggttcccggttccggtggcgag
gaggtgtcgtcgacggaccctgcagcttccacccagcgtcctctccgcaatctggtgtcc
tacctgaaacagaagcaggcagctggagtcatcagcctgcccgttggaggcagccgggat
aaggaccaccagggtgttctccatgcgttccctccctgtgagttctcacagcagttcatt
gatgcctcggctaaagctctggccaaaaccgacgaggactatctggtgatggtcgtggtg
cgagggccatcataa
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