Oncorhynchus gorbuscha (pink salmon): 124045529
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Entry
124045529 CDS
T07892
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124045529
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124045529
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Alanine_zipper
EzrA
Motif
Other DBs
NCBI-GeneID:
124045529
NCBI-ProteinID:
XP_046220833
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All DBs
Position
LG10:10088627..10179600
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AA seq
1785 aa
AA seq
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MHVTLVIFICALAYATAQGPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKEPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASVFPGISKGPLRK
VDDVTCESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELIVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHNDVPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLSTGNANGGVCDDC
LHNTMGRTCEMCKPFYYLNPSRDIRDPGVCSACDCDPDGSLNGGICDGHDEPSLGMVAGQ
CRCKDHVEGPRCDKCKSGFFGLSADHPLGCQACQCDPRGTVSERPPCDPVSGDCFCKRQV
TGRSCGQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMDNGQCRCRSHMMGRQCTQVES
GYFFMALDHYTYEAELAMLGQGCSVEQREHQPERPATWTGTGFAKVPEGSSLELSINNIP
YSMEYDLLIRYESQMPQDWEEVRVTIVRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPQSICLEREISYKLHFEFSRYLNGNNVLIPGTTAANILVDSISLLPRYSSLEMFIGGDP
ASIARKQSYERYRCHDGAKSVARPQISDVCTKHITSMSAIINHGALACQCDPQGSVSSVC
EMRGGQCRCRSNVIGRRCDRCAPGSYGFGPAGCRACECSLEGAATRFCDQLTGQCPCSQG
AFGQRCDGCQAGHWGFPNCKQCLCNGHAEECHQRTGACLNCRENTGGDKCDRCANGYYGN
PVLGTGNGNRCQPCPCPDGPNSGRHFATSCHQDNRNRQVVCNCNQGYTGSRCEECAPGYY
GNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGVCNSGYYGDASRR
NCRKCTCNFLGTAQTQCTARDECVCQRATGQCLCLPNTIGLTCDHCEPNYWNLASGRGCE
ACGCEPNNAVNPACNEFTGQCQCRDGFGGKICTDCQENYWGDPRIQCRACDCDPRGIETS
QCGQKTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVVQNLAVRTKTLSE
RAVEIQNTGLTGAYEKAFRDLEEKLARAQGIVNARNTTAEAVSSLMELIEDLRSQIGETT
DVLNHLEGDLTSVGNSNVEASNELSALEREAKELNLTSDQLHRQLDILKNSNFLGAYESI
RSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLVSAKKDDFNRKNAANKRALGDL
NAKAQTLDMKKINEKVCGGPGDSPCVESHCGGAGCRDDEGNRHCGGLNCNGAVAMAENAL
EKSKHAEKELNIAMREVEELFHKVADAKTKAEEAKGKAQAALDKATNTKNKVERSNNDLR
DLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKDRVRSLSNVDAIL
KQTQDDVRKAEQLLQEAKKARNRADGVKSTAETVKRALEDAKTAQAAAEKAIQRARVDIG
ETEVRLAQIESETSSSEHDLNNAMDRLGNLGRGIDSLKLKRAKNSMAAARAEETATMARD
KANDAKQILDGELTDKYHTVQDLVDRKAKTVQEAKKTAERLRDEAKELLKDAQDKLQRLA
ELEKDYEENQKKLEGKARQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgacactggtcattttcatctgtgccctagcctatgccaccgcccaggggcca
gaccatgcccacggctgtacccatggcagctgttacccagcaacgggagacctgttggtg
ggccgtgagaagagcctgaaggcctcgtctacctgtggctccaggaagaaagagccttac
tgtatcgtcagtcatctacaggatgagaagaaatgtttccagtgtgactctcgccggcca
tatgacccagtctacaataccatcagtcaccgcattgagaacgttatcacaacgtttaaa
ccacatcgcaagaagtcctggtggcagtcagagaatggaaagcctgatgtcttcattcaa
ctggaccttgaggcagaattccatttcactcatctaatcatgaccttcaagacgtttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgcctcggtcttccccgggatatccaaaggtcccctgcgcaag
gtggatgatgtcacctgtgagtcccgctactctgacatcgagccatccacagagggagag
gccatctacagagttttggaccctgccatccacattgaggacccctacagccccaacatt
cagaatcagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacaccctgggt
gacaacctgctggactcccgcgtggagatcaaggagaagtactactacgccatgtatgag
ctgatcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccacgggaggtgtgtgtgtaagcacaacaccaag
ggtctgaactgtgagctgtgtgacgacttccataacgacgtgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgcaactgtaatggtcactccaaccagtgtcac
tttgacatggcggtgtacctgtccacgggcaatgccaacggtggcgtctgtgacgattgt
ctccacaacaccatgggacgcacttgtgagatgtgtaaacccttctattacctgaacccc
agcagggacatcagagacccaggagtctgtagtgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgatgagccgtccctgggcatggtcgctgggcag
tgccgctgcaaggaccatgtggagggacctcgctgtgacaaatgcaagtctggcttcttc
ggcctgagtgcagaccatcctcttggctgccaagcctgccagtgtgaccccaggggtacg
gtgtcagagagaccaccgtgtgaccctgtgagcggggactgtttctgcaagcgccaggtc
accggacgcagctgtggccagtgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccaccgataaccactgctcaatggac
aatgggcagtgtcgttgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtacttcttcatggctctggaccactatacctacgaggctgagctggccatgctggga
cagggctgcagtgtggagcagagggagcatcagcctgagcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttgtccatcaacaacatcccc
tactccatggagtacgacctcctcatccgctatgagtcgcaaatgccacaggactgggag
gaggtccgtgtgactatcgttcggccagggcctattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtttccctgccagcaggatccaggtttgttgtg
ctgcctcaatctatctgcttggagagagaaattagctacaagcttcactttgagttcagt
cgctatctgaatgggaacaatgttctcattcccggtacaactgctgccaacattctagtg
gactctatctccctcctccctcgttactcctccctggagatgttcatcggcggagacccc
gcctccattgcccggaaacagagttacgagcgctaccgctgccatgacggggctaagagt
gtggcacgccctcagatcagtgacgtctgtaccaaacacatcaccagcatgtcagccatc
attaaccatggagctttggcttgccagtgtgacccccagggttcagtcagctcagtgtgt
gaaatgcgcggaggtcagtgtcgctgtaggtccaatgtgattggacggcgctgtgaccgc
tgtgctcctgggtcgtacggctttggacctgcaggatgtagagcctgtgagtgtagccta
gaaggtgcggccactcggttctgtgaccagctgactgggcagtgcccatgcagccagggt
gcgtttggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cagtgcctgtgtaacggacatgctgaggaatgccaccagaggaccggagcctgtctcaac
tgcagggaaaacactggaggggacaaatgtgacaggtgtgccaatggttactacggaaac
ccggtgctgggcacaggtaacggtaaccgatgccagccctgcccctgcccggatggccca
aacagcggaagacacttcgctacctcctgtcaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggttcccggtgtgaggagtgtgccccaggttactac
ggtaacccctcccagccaggtgggcggtgccagccgtgcaggtgcagtaacaacattgac
atgtcagacctggatgcgtgtgaccggaggacaggagagtgtaagaagtgtctctacaac
acagagggaccggactgtggcgtgtgcaacagcggttactatggagacgcctcgcgacgc
aactgcagaaagtgcacctgtaacttcctgggcacagcgcaaacccagtgtacagcacgg
gatgagtgtgtctgccagcgtgccacagggcagtgcctgtgtctacccaacactatcggc
ctgacatgtgaccactgtgagcccaactactggaacctggctagtgggcggggctgtgag
gcctgcggctgtgaacccaacaacgctgtcaacccggcctgcaacgagttcactggacag
tgtcagtgtcgtgacggatttggtgggaagatctgcacagactgccaagagaactactgg
ggcgacccaaggatccagtgtagagcctgtgactgtgacccccggggcatagagacctct
cagtgtggccagaagacaggccactgcgtgtgtcaacagggggtgtcgggcgtgcgttgt
gatcagtgtgcccggggcttctcaggccagttccctaactgccagccctgccaccagtgc
tttggagactgggaccgggtggtacagaacctggctgtccgaaccaagaccctgtcggag
cgggctgtggagatccagaacacgggcctgactggagcctatgagaaggccttcagagac
ctggaggagaagctggcacgagctcagggcatcgtcaatgcccgcaacaccaccgcagag
gcagtcagcagcctgatggagctcattgaagacctcaggtctcagataggggagaccaca
gatgtactgaatcatctggagggagacctgaccagtgtagggaacagtaatgttgaggcc
agtaatgagctcagtgctctagagagagaggccaaagagctcaacctgacctcagatcag
ctccaccgccaactggacatcctgaagaactctaacttcctgggtgcatatgaaagcatc
cgaagctcctataataagtcccgtgacgcagagcggcgagccaaccagtccaccactacc
acgcccagcactgtcagccaatcagcagacacccgccgcaagacagaacgcctcgtctct
gccaaaaaagacgacttcaaccgcaagaacgccgccaacaagcgagccctgggggacctc
aatgccaaagcacaaaccctggacatgaagaagatcaacgagaaggtctgtgggggccct
ggcgattccccctgtgtagagagccattgtggaggggcgggttgccgtgacgacgagggg
aacaggcactgtggaggcctgaactgcaacggtgccgtagcgatggcagagaacgccttg
gaaaagtctaagcacgcagagaaagagctgaacatagccatgagggaggtagaggagctc
ttccacaaggtggcagatgccaagaccaaggcagaggaggcaaagggtaaagcccaggca
gctctggacaaggccactaacaccaagaacaaggtggagcgctccaacaacgacctgcgg
gacctcatcaagcagatcagggacttcctcatgcaggagggtgctgatccagacagcatt
gaaacagtggctaaccgtgtcctggagctgtccatcccagcctcaccacagcagatcaga
cacctggcagaggagatcaaggaccgggtccggagcctctccaacgtagacgccattctg
aaacagacacaggacgacgtgcgcaaggcagagcagctgctgcaggaggccaagaaggcc
aggaatcgggcagacggggtgaaatccacagcagagacggtgaaacgggcgcttgaggac
gctaagacggcccaggctgcagcggagaaggccatacagcgggcgagggttgacatcggt
gaaacggaagtccgactagcacagatcgagtctgagacctccagcagtgaacatgacctg
aataatgccatggatcgccttggcaacctgggtcgggggattgacagtctgaaactcaaa
cgtgcaaaaaacagcatggcagcagctcgagctgaggagacagccactatggcacgggac
aaagccaatgatgccaagcagattttagatggcgagctgacggataagtatcacacagta
caggacttggtggacaggaaagccaagaccgtccaggaggccaaaaagacagcagagcgc
ctgagagacgaggccaaggagctactgaaagacgcgcaggacaagctccagagactagca
gaactagagaaagactatgaagagaaccagaaaaagttggagggcaaagcacggcagttg
gacggcctagaagacaagatgaaggctatcctcaacgacatcaacaaacagattcagatc
tacaacacctgtcagtaa
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