Oncorhynchus gorbuscha (pink salmon): 124045531
Help
Entry
124045531 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 19-like
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124045531
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124045531
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124045531
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124045531
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124045531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
DUF1388
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
124045531
NCBI-ProteinID:
XP_046220834
LinkDB
All DBs
Position
LG10:10180592..10215288
Genome browser
AA seq
1509 aa
AA seq
DB search
MASSSESGRRNGGQRSADDSTSKKKQKDRANQESREAKRAAAGANAEHKKDVFVDWKQNA
NEVIARLRCGDGVQRVEDVTITFTDTDCQARFPDGRQWDCHLHEEIEGSCSKVQYKEKSG
FLLLVMHKKIPFHSWPSLMQNKKEKQPVKVEAKNGKDQKQPPLVKPEKSVPETTDMAELS
TQTSAPPAQCEQRRGKAERGVKRIMNYKPADRLESVVKAGGGGQTKPVSVSKGDLPQEPS
AKRPVHPPKVSKDPTSEMPRDTHSKSTANGKPHSHTGRDLQTSTAGDNRAELLGNGHEGT
TPEVAVSHTQQELKVQTEDKKAPESDFKAGAEEVIIPAATVSSAQISPKAGASTNRTERP
GEAQRPGEAQRPGEAQRPGGPEARGGRPGEAQRPGEAERPGEAERPGEAERPGEAERPDS
ETLVRQPPNEADQATESLTPTNRSGSGNPVTATDNEQAESSSSSTQEEKRDRSKEEPLEM
KQEEVPEPMVNLKLLKNDSYEKGTDLMVVNVYMKGIFRETARVIFREQDFTLIFQTSDVN
FLRLHADCGANTVFKWQVKLRNLIQPEQSTYAFTPSRLDITLKKRHSQRWGGLEAPATQV
GGAKVAVPSALSSQASQPGSSKHSLSAKEEPPWVGEGKPKSPRTVDGCLDSVSSRTVSDH
VPIKQEPPVTPKPTCMVQPMTHAPPAGSQHSQRSVEEEEEEEEKVCLPGFTGLVNLGNTC
FMNSVIQSLSNTRELRDYFHDRAFENEINCNNPLGTGGRLAIGFAVLLRALWKGTHHAFQ
PSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVV
ADEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPVPLPQKQKVLTVF
YFAKEPHKKPMKFLVSVSKENSSTAEVLESISRSVRIKAENLRLAEVVKSRFHRIFLPSN
SLDTVSSSDMLFCFEVLSKELAKERVVVLRVQQRPQVPSIPISKCAACLKPPLSDEEKLK
RCTRCYRVGYCNQVCQKKHWSSHKVLCGPNIENVGLPFLVSVPESRLTYARLSQLLEGYS
RYSVNVFQPPFQSGRTSPEVTQCLADLPPPAETPESVGPGNTARGGGAGDSEQEGSSLVP
EAPLETAQASAHPAGDPDALSTHTTDSGFIEASSDSQGEKETSCEKAVRPEAAVTGYQQP
SESASSHTSQFYITVLHSNSKEQTLEEKEEAVLDLPEDSSLELVWKNNERLKEYVLVRSK
ELEFEEDPGSVNETARAGHFTLEQCLNLFTRPEVLAPEEAWYCPKCQQHREASKQLLLWR
LPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQKDDMQQPPIYDLYAVIN
HYGGMIGGHYTAYARLPSAQNSQRSDVGWRLFDDSTVTMVEESQVVTRYAYVLFYRRRNS
PVERPPRLLGAESSTSAGASASQASGQALFGTDLDPEGPPPLTPEVTSELFGHSGECAAL
SYSNMEEVD
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagtgagtcagggcggcggaatgggggtcagcgcagcgcagatgacagc
accagcaagaagaagcagaaagacagggccaaccaggagagcagggaggccaagcgagca
gcagcaggggccaatgcagagcacaagaaagatgtgtttgtggactggaagcagaatgct
aatgaggtgatcgcgaggctgcgctgtggagacggggtgcagagggtggaggacgtcacc
attaccttcaccgacacagactgtcaggcccgcttcccagatgggcgccagtgggactgt
catctgcatgaggagattgagggctcctgcagcaaagtacagtacaaagagaagagtggc
ttcctcctgctggttatgcacaagaagatccccttccactcctggccttcccttatgcaa
aataagaaggagaagcagcctgtgaaagtggaggccaagaacggtaaagaccagaagcag
ccgcctctggtaaagcctgagaagtctgtcccagagacaacagacatggctgaactgtcc
acccagacgtctgctccaccggcacagtgtgaacaaaggcgtggcaaagcagagcgaggt
gtcaaacgcatcatgaactacaaaccagccgacaggctagagtctgtggtgaaggctgga
ggaggggggcagaccaagccggtcagtgtcagtaaaggggacctgcctcaggagcccagt
gccaagcgccccgtccatccccccaaggtctccaaggaccccacctccgagatgcccagg
gatacacactccaagtccacagccaatgggaaaccacacagccacactggccgggacctc
cagacgtctacagctggtgacaatcgagctgagctgctaggcaatggccatgagggtaca
acacctgaggtagccgtcagccacacgcagcaggagttgaaagttcagactgaggacaag
aaggccccagagtctgatttcaaggctggtgcagaagaggtaatcataccggcagccact
gtgtccagtgctcagatcagccccaaggctggagcctccaccaacagaacagagaggcca
ggggaggcccagaggccaggggaggcccagaggccaggggaggcccagaggccaggaggc
ccagaggccaggggagggaggccaggggaggcccagaggccaggggaggccgagaggcca
ggggaggccgagaggccaggggaggccgagaggccaggggaggccgagaggcctgattct
gagacgctagtgagacagcctccgaatgaggctgaccaggccactgagtctctaacacca
accaatcgttcaggatcagggaatcctgtgactgcaacagacaacgagcaggctgagtcc
tccagcagcagcactcaggaggagaagagggaccggtctaaggaggaacctctggagatg
aagcaggaggaagttccagagccaatggtgaacctgaagttgttgaagaacgactcgtac
gagaaagggacagacctgatggtggtcaacgtgtacatgaagggcatcttcagagagaca
gccagggtgatcttcagagaacaggacttcacactcatcttccagaccagcgatgtaaat
ttcctgcgtcttcatgcggactgcggagcgaacaccgtctttaagtggcaagtcaaactc
cggaacctcatccagcctgagcagtccacgtatgccttcaccccgtcccgtttagacatc
accctgaagaagaggcacagccagcgctgggggggcctggaggcccctgctacacaagtg
ggtggcgccaaggttgctgtgccctccgcactgtcctctcaggccagtcagccgggcagc
agcaagcactccctctctgccaaggaggagccaccctgggtgggggaggggaaacccaag
tcccctcggacagtggacggatgcctggacagtgtgtcatcccgcaccgtctcagaccat
gtccccatcaaacaggagcctcctgtcacgcccaagcccacctgtatggtccagcccatg
acccacgcacctcctgccggcagccagcacagccagcgcagcgttgaggaggaagaggag
gaggaggagaaggtgtgtctgccaggcttcacaggcctggtcaacctgggcaacacatgc
tttatgaacagtgtcatccagtctctttccaacacccgggaactcagggactactttcat
gaccgggcgtttgagaatgagatcaactgtaataacccgttggggacaggtggtcggctg
gccatcgggttcgctgtgctgctccgggctttgtggaagggtacccaccatgcttttcag
ccctctaagttaaaggcgatcgtggccagtaaggccagtcagtttacaggctatgcccag
cacgatgcccaggagttcatggccttcctcctggatgggctccacgaggacctgaaccgc
atccagaacaagccctacacagagaccgtggattcagacggacggctggacgaggtggtg
gcagatgaggcatggcagaggcacaagatgagaaacgactcgttcatcgtagacctcttc
cagggccagtacaaatccaagctcgtctgcccagtgtgctccaaggtttccataaccttc
gaccccttcctctaccttcccgtgcccttgccccagaagcagaaggtcctcacagtgttc
tactttgctaaagagcctcacaagaaacccatgaagttcctggtgagtgtgagtaaagag
aactcgagcacagccgaggtcctggagtccatctctcggagtgtgaggatcaaggcagag
aacctgagattggctgaggtagtgaagagtcgtttccatcggatcttcctcccatccaac
tccctggacacggtctcctcctcagacatgctcttctgcttcgaagtgctgtctaaggag
ctggccaaggagagggtggtggtgctcagagtccagcagaggcctcaggtccccagtatt
cccatctcaaaatgtgctgcctgcctgaagcctcctctctcggatgaagagaaactgaag
cgatgcacccgctgctaccgcgtgggttactgcaaccaggtttgccagaaaaaacattgg
tccagccacaaggttctgtgtgggccgaacatagagaacgtggggcttcccttcctggtc
agcgtccctgagtccagactcacctatgcccggctgtcccagctgctggaaggatactct
aggtattcagtgaacgtgttccagcctcccttccagtctggcaggacgtctccagaggtc
acccagtgcctggctgaccttccccctccagcagagacccctgaaagtgtggggccaggg
aatacggccaggggcggtggggcaggggactcggagcaggagggctcctctctggttcct
gaggctccactagagacagcccaggcctcagcacatccagccggagacccagacgccctc
tccacccacaccacagactcaggtttcattgaggcctcctctgactcccagggagagaag
gagacctcctgtgagaaggctgtcagaccagaagctgctgtgaccggctaccagcaacca
tcagagtctgcgtccagccacacctctcagttctacatcaccgtcctccactccaacagc
aaggagcagacactggaggaaaaggaagaggccgttctggacctccctgaggactccagc
ctggagctggtgtggaagaacaacgagcgtctcaaggagtacgtcctggttcgatccaag
gagctggaatttgaagaggaccccgggtcggtcaacgagacagccagggctggacacttc
accctggagcagtgcctcaacctcttcactaggcctgaggtgctggcaccagaggaggca
tggtactgtccaaagtgccagcagcacagagaggcctccaagcagctgctgctatggcgt
ctgcccaacgtcctcatcatccagctcaaacgcttctccttccgcagcttcatctggagg
gacaagatcaacgacatggtcgacttccccgtcaggaacctggacctcagtaagttctgt
attggtcagaaggacgacatgcagcagcctcccatctatgacctctatgcagtcatcaat
cactacgggggcatgatcggaggtcactacactgcctacgcacgcctgcccagcgcccag
aacagccagcgcagtgatgttggctggcgtctttttgatgacagtacggtgacgatggtg
gaggagagccaggtggtgacacgctatgcctacgtgctgttctaccgccgccgcaactcc
cctgtggaacgaccacctcgcttactgggggccgagtcctccacctctgcaggagccagc
gccagccaggcctctggccaggcactctttgggactgacctggaccctgaaggaccccct
ccgctgaccccagaggtgacctctgagctgtttggacactctggcgaatgtgctgctctg
tcctacagtaacatggaggaggtggactaa
DBGET
integrated database retrieval system
