Oncorhynchus gorbuscha (pink salmon): 124045583
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Entry
124045583 CDS
T07892
Symbol
parapinopsina
Name
(RefSeq) parapinopsin a
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ogo04030
]
124045583 (parapinopsina)
G protein-coupled receptors [BR:
ogo04030
]
Rhodopsin family
Vision
Opsin
124045583 (parapinopsina)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srv
Rota_NSP4
Motif
Other DBs
NCBI-GeneID:
124045583
NCBI-ProteinID:
XP_046220924
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All DBs
Position
LG10:14901427..14910924
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AA seq
346 aa
AA seq
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MDQRQLLPNLHGNISSSPGSVSEALLSRTGFTILAVIVGVFSVSGVCMNVLVIVVTMRHR
KLFQPLNYALVNLAVADLGCALFGGLPTMVTNAMGYFSMGRLGCVLEGFAVAFFGIAGLC
SVAVIAVDRYVVVCRPMGAVMFQTRHAVGGVVLSWVWSFLWNTPPLFGWGSFELEGVRTS
CSPNWYNREPGNMSYIILYFLLCFAIPFSIIMVSYARILFTLHQVSKLKVLEGNSTSRVE
IQVVRMVVVMVMAFLLSWLPYAAFALSVILDPSLHINPLIATVPMYLAKSSTVYNPIIYV
FMNRQFRDCAVPFLLCGLNPWASEPVGSEADTALSSISKNPRVSPQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacgacagcttctccccaatctccatggaaacatctcctcctccccgggctcg
gtcagtgaagcgctgctctccaggacgggcttcaccatcctggcggtgatcgttggtgtg
ttctcggtgtccggagtctgtatgaacgtcctggtcatcgtggtgacgatgagacaccgg
aagttgttccagcctctgaactacgccctagtcaacctggcagtggctgacctgggctgt
gctctgttcgggggactgcccactatggtcaccaacgctatgggctacttcagcatgggg
cggctaggctgcgtgctggagggtttcgctgtggctttctttggtattgcaggtctgtgt
tcagtggccgtgatagctgtggaccgttatgtggtggtgtgtcgaccaatgggggcggtc
atgttccagaccaggcatgcagtcggaggggtggtcctgtcctgggtgtggtcgttttta
tggaacaccccgcctctgtttggctggggcagctttgaactggagggggttaggacctcc
tgctccccaaactggtacaacagggaaccaggaaacatgtcttacatcatcctttacttc
ctgctctgctttgccattcctttctccatcatcatggtctcctatgctcgcatcctcttc
acactgcaccaggtgtccaagctgaaggtgttggagggcaacagcacctcccgtgtggag
atacaggttgtgcgtatggtggtagtcatggtgatggccttcctgctcagctggttgccc
tacgcggccttcgccctctctgtgatccttgaccccagcctccacatcaaccctctcatt
gccacggtgcccatgtacctggccaagagcagcactgtctacaaccccatcatatacgtg
ttcatgaacagacagttccgggactgtgctgttcctttcttgctgtgtggtctgaacccc
tgggcctcagaaccagtgggctctgaagctgataccgccctgtcctccatcagcaagaac
ccacgagtctcaccccaatga
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