Oncorhynchus gorbuscha (pink salmon): 124045612
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Entry
124045612 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor-like
KO
K23215
bcl-6 corepressor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124045612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124045612
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
124045612
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
124045612
NCBI-ProteinID:
XP_046220986
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All DBs
Position
LG01:complement(88699877..88788081)
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AA seq
1971 aa
AA seq
DB search
MLSATQMYGTVPPWMSHERAQMYGMVMEERRVPVSDAGTQRNLDLREGNHITQSMVDARL
TPLAAMGLDRNALMRDGLRLHGSVVYPGIRALSAEKPHEGSTTLPLGYNRDGLPDLLYKP
DVSMDRSKPTNGYLDLYKSPPPSLHRGPEGLDRRSVGPGGEKHSELGLGGAGAGAGGYLR
LPWGLSRGLYPEAGLYPYMDSSKYAALSMYKAQFLNQPSPYLPQHLAYQSLCASQGGNMN
PAAASAGERLYYMPPYPPSSISSPLVGSPMRIPAVSVAPTSIVHCQEKGLSVGSRVHHEG
SPFGQQLHQPPPPPQHLLPPHRQRQRQIPQQKNKPSRPPSNKGASNSNGSSSSSSSGSSG
GSNTNSSSLPIDSSPRASSRLPQPAPPLPPPHIDSTIDLQRAVSRIVPLSSSSCSSSSSQ
TIPHSFYVSSMAPEHPSPARPSPHKPRPRDGVSDHRAGGCEKRPSQCPSKPSSERPAPLN
QPPTTKDPADPKPLDLSGRWLELGLSPNSFPVKMEALGSPGPRYGPLPSRELLKETLSLS
PPSLPSHSLSVVSSTSSKAPERPEMISTLHSSWVVPTLTPTYTIGPSPDTQGKGSSPSVI
KHKALERVLPQQRSPSCPRVGETNTTPIPSNLNPPSTIPLSPKPNNDWPKHSPSQSESSP
MAGHHRNSTEKPPKATKRAETSREVSPYNKRPCLENSNGHPPSHLYLPQSEAYLPHSMVY
ANRYLHYSVPDGMALHSLPLPGKGPAYPPPILLGSNSLYPSHLAAKHPLPYHSYAGEYLT
YNSQEMAHPLMHTHTDSKALERADQRPKSRGQDKPRGLKEDFGGSHRGRSDVETGEGSHV
KRNKDAGEWGGSQPRPLSSSSTSIPSKDRIICIDLVHSDTDGESTPASNKPPLPVIVPIT
RGNQHQCGHGDQSMREVERDPEHQLHHHHHHHLHHHPSPSSTQRTTHTDRQPETLCMRPR
PFQETGCPGVASSPPQGSPGLVTRAEESREGQSPSSDPRDQGEQGKSTLRCARTSGDRKT
RDWTLGDCDRTAVDRTTGDSGRMPGDRTSREEREEMDRRSSSHPIHRYMDLGKEREREGG
SVEDTEESHGEGDEDEEGGRRGSRRTSLTKRIANSSGYVGDRIKCVTTELYADSSKLSRE
QRALQMEVISREESNISRPAANWERAMMRFSELELKEKECGGVCVSASAAVAGQELADRQ
QREREWEHCQHTARQGEREGGRQDYGNNRVPVLQRCGGQRESLYPGQEAWEGARDGAREG
EGWRCSPPVLALADRHPQEKGGQGMVPIRKHIHSLQKGEEEGEKSSEKDRMTLDACVLWG
SEQPTAPITNEEDDDEEVRKLKVCIELKGLRLRKPTSSSPERPEVKEERTWSSHHSPSFL
PRTLPPTPTWSPAHAPPPRDRKFKVDPEVKPLSQKPEITKSWAREMLANGDAKRVGLLPS
TQQRDRSAPQGPLVVQGCDWGSKEPRRGGLGVKTEGQCLPPSAPEPPTKDTASLKPRRHS
DTDKPKGKRPCKTKHISQRERERRRELLNGGNNQHGSTALGAALEDKVSEQCARRKRPSS
PLHYLGSPVKPCSRSTRPPSVPPQVNSSGTVPPDGAGVRRAPPAEPPVVRPIPPEARRLI
VNKNAGETLLQRAARLGYEEVVLYCVENRVCEVNHRDYAGYCALHEACARGWISIVIHLL
EHGADINCSAQDGTRPLHDAVENDHLDVVRVLLSYGADPTLATYSGRGLLKMTHSDSMER
FLTDYFADLQGRSNDDPEIYWEFYGSAVCESLEEGNVCDVLADPPGPEDKDRRELFEFEF
SDQPLLPCYNIQVSLSQGPRNWLLLSDVLRRLRMSARSFRSSFPHMEVVTMAEAEFYRQA
SLSQLFSCPDELEGFQPDSKELLDLVEGSAELAALLGSNLECLDDLWDEPPEANANVDEK
ANVNGNIRAMANGNVNAKVNGNIRAMAKGNISAKTNGSTHVKAKANANRRS
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgctacacagatgtacggaacggttcccccatggatgagtcacgagagggcc
caaatgtatgggatggtcatggaggagaggagagtacctgttagtgatgcggggacccag
agaaacctggatttaagagaaggcaaccacatcacacaaagcatggtggatgccaggcta
acgccccttgccgccatggggctggaccgcaatgccttgatgcgggacggcctccgcctg
catggcagcgtagtctacccagggatccgagcgctgtcagccgagaagccccacgagggg
tccaccaccctccccctcggctacaaccgggacggccttccagacctcctctacaagcct
gacgtttccatggaccggagcaagcctaccaacggctacctggacctgtacaagagccct
ccaccaagcctccataggggaccagaagggctggacaggagaagtgtgggacctgggggg
gagaagcactcagagctgggtctggggggtgctggtgcaggagcaggcgggtacctgcgt
ctgccctgggggctgagtcgggggctgtaccccgaggcgggcctctacccctatatggac
tcttccaagtatgcggccctcagcatgtacaaggcccagttcctcaaccagcccagcccc
tacctgccccagcacttggcctaccagtccctctgtgcctcccagggggggaacatgaac
cctgctgctgcctccgccggcgagaggctctactacatgcccccctaccccccgtcctcc
atctcctcccccctggtggggtctcccatgaggatcccagcggtgtcggtggcccccacc
tccattgtgcactgccaggagaagggattgagtgttgggtctcgtgtccaccacgagggg
tctccgtttgggcagcagcttcaccagccaccccctccaccccagcatcttctcccccca
cacagacagagacagagacagatcccccagcaaaagaataagcccagtagacccccctcc
aacaaaggagccagtaacagcaatggtagtagtagtagtagtagtagtggtagcagtggt
gggagtaatactaatagtagtagccttccaattgattcctcccctcgcgcctcttctcgc
ctcccccagcctgctcctcccctgcctccccctcacatagacagcaccatagacctacag
agggcagtctctagaatagtaccattatcttcctcctcttgttcttcttcctcttcccag
acgatacctcactcgttctatgtgagcagcatggctccagagcacccatcccctgcccgg
cccagcccccacaaacccagacccagagatggggtgtcggatcacagggctgggggatgt
gagaagagacccagtcagtgcccttctaaaccatcctctgagcggccagccccattgaac
cagcccccgactaccaaagacccagcagacccaaagcctcttgacctctctggaagatgg
ttggagttaggcctgtctcctaacagcttccctgtgaagatggaggctctggggtcccca
gggcctcggtatggacctctccccagccgggagctcctgaaagagaccctctctctctca
cccccctccctaccctcccactccctctcagtggtcagcagcacatcctctaaagcccca
gagaggccggagatgatcagcactttgcactcctcctgggtggtgcccacccttacaccc
acctacaccattgggcccagcccagacacccaagggaaaggctcctctccatctgtcatc
aaacacaaggctctggagagagtcctgccccagcaacgcagtccatcctgccccagggta
ggagagacaaatactaccccaataccttccaatctcaatcccccctccacaatacccttg
tcccccaaacccaataatgattggcctaaacacagccccagccaatcagaaagttccccc
atggccggccatcataggaactccacagagaagccccccaaagccaccaagagggctgag
acatcccgggaggtgtctccatataataaacgtccgtgtctagagaattccaatgggcac
ccacccagccacctctacctgccccagagcgaggcctacctacctcacagcatggtgtac
gccaaccgatacctgcactactctgtacccgacggcatggccctccactctctccctctg
ccagggaagggccctgcctaccctccccccatcctgcttggtagtaacagcctttacccc
tcccacctggcagccaaacaccccttaccataccacagctacgctggggagtacctcacg
tacaactcccaggagatggcccaccctctgatgcacacacacacagactctaaagccctg
gagcgggcagatcagcggcccaagtcccgtggccaggacaaacctaggggactcaaagag
gattttggtgggtcccacaggggccggagtgatgtggagacaggggaagggtcccatgtg
aagcgcaataaagatgcaggggagtggggagggagccagcccagacccctttcctcctcc
agcaccagtatcccttccaaagatagaatcatctgcattgacctcgtacactccgacaca
gatggagaatccacgccggcctccaacaagccgccactccctgtcattgttcccatcacc
aggggcaaccaacaccagtgtggccatggcgaccaaagcatgagggaagtggagcgagat
ccagaacaccaattgcatcatcatcatcatcatcatcttcatcaccaccccagtccaagc
tccacccagagaactacccacacagacagacaaccagagaccctctgtatgagacccagg
cccttccaggagacgggctgtccgggtgtggcctcgagcccacctcagggctccccagga
ctggttactcgggccgaggagagccgtgagggccagagcccttcctcagacccaagggac
cagggggagcagggcaaaagcaccctgcgctgtgcccgcacatctggggaccgcaagacg
agagactggactcttggcgattgtgaccgcaccgcagtagaccgcacaaccggcgatagt
ggccgcatgcctggcgaccgcacgtctagagaggagagagaagagatggacagacgatcc
tcctcccaccccatccatcgctacatggacctggggaaggaaagagaaagagaaggaggg
agtgttgaagacacagaggagtcgcatggagagggggatgaggacgaagagggtggacga
agaggctcacggaggaccagtctgaccaagaggattgctaactcttcaggctacgtcggc
gaccgcatcaaatgtgtcacaaccgagctgtatgcagactctagcaagctgagtcgggaa
cagcgcgccctgcagatggaagtcatatcacgagaggagagtaatataagtcgccctgca
gctaactgggagcgggcgatgatgcggttctcagagctggagctgaaggagaaggagtgc
gggggtgtgtgtgtgtctgcgtcggcagcggtagcaggacaggagttggcagaccgccag
cagagagaaagagagtgggaacactgccaacacaccgccaggcagggagagagggagggt
ggaaggcaggactatgggaacaacagagtcccagtcctccagaggtgtgggggccagagg
gagagcctgtacccagggcaggaggcctgggagggggctagagatggtgccagagagggt
gagggctggcgatgttcacccccagtcctggcactggcagaccggcacccccaggagaag
ggtgggcagggcatggtacccattaggaaacacatacacagcctacagaagggagaggag
gaaggagaaaagagctcagagaaggacagaatgactttagatgcgtgcgtgctgtggggc
agtgagcaacctacggctcctattactaatgaggaggatgatgatgaagaggtgaggaag
ctgaaggtgtgtatcgagctgaaggggctccgcctccgcaagcccacctcttcctccccc
gagaggccagaggtaaaagaggagaggacatggtcatcacatcacagcccctccttcttg
ccccggaccctccccccgaccccaacctggagcccagcccatgccccgccccctcgggac
aggaagttcaaggttgatccggaagtgaaacctctgtcacagaagccagagatcacaaag
agctgggccagagagatgctggctaatggagacgctaaacgagttggactgctcccttcg
acccagcagagggacagatctgccccccaggggcccctcgtggtgcaaggatgtgactgg
ggatccaaggagcctaggagaggagggctgggggtgaagactgagggtcagtgcctcccc
ccctcagcccctgagccccccaccaaagacaccgcctctctcaagccccgtcgtcatagc
gacacggacaaacccaagggcaagcggccgtgcaagacaaaacacatcagccaaagagag
agggagcggaggagagagctgctgaacggcggcaacaaccagcatggaagcactgctctg
ggagcagctttggaggacaaggtcagtgagcagtgtgctcggaggaagagaccctcttcg
cccctccattacctcggttctccggtcaagccctgttcccgctcaacgcggcccccttcc
gtaccccctcaggtgaacagctctgggactgtcccaccggatggagcaggggtgaggagg
gccccgcctgctgagcctcccgtggtgcgacccatccccccagaggcgcggagactaatt
gtcaataagaacgctggagagacgctgttacagagagcagcacggctcggatacgaggag
gtggtgctgtactgtgtggagaaccgtgtgtgtgaggtgaaccacagggactacgcaggc
tactgtgccctccacgaggcctgcgcccgcggctggatctctatagtcatacacctgctg
gagcatggggccgacatcaactgcagcgcacaggacggcaccaggcctctgcatgacgcg
gtggagaatgaccatctggacgtagtgcgtgtgttgctgtcctacggggctgaccctact
ctagccacctactccggccgcggtctgctcaagatgacacacagcgacagcatggagcga
ttcctcactgattattttgctgacctgcagggccgctctaatgatgacccagaaatctat
tgggaattctatggcagcgctgtgtgtgagtcgttagaggagggcaatgtgtgtgacgta
ctggcggaccccccagggccggaggacaaggacaggagggagctctttgagtttgagttc
tctgaccaacctctcctcccctgctacaacatccaggtgtccttgtcgcaggggcccagg
aactggcttctcctctcagatgttctccggcggctgcgaatgtctgcccgttccttccgc
tcctccttcccccacatggaggtggtgacgatggccgaggcagagttttaccgccaggca
tctctctcccagctcttctcctgcccagacgagctggagggcttccagcctgacagcaag
gagctgctggacctggtggaggggagtgctgaactggccgctctgctgggttctaatctg
gagtgcctcgacgacctctgggatgaacccccggaggctaatgctaatgttgatgaaaag
gctaatgtcaatgggaacattagggctatggctaatggtaacgttaacgctaaggtcaat
gggaacattagggctatggctaaaggtaacattagcgctaagactaatggtagcactcat
gttaaagctaaggctaacgctaacagaaggtcgtga
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integrated database retrieval system
