Oncorhynchus gorbuscha (pink salmon): 124045645
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Entry
124045645 CDS
T07892
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124045645
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
General mRNP proteins
124045645
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
CDC45
RRM_8
Motif
Other DBs
NCBI-GeneID:
124045645
NCBI-ProteinID:
XP_046221054
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Position
LG10:complement(19558313..19584905)
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AA seq
562 aa
AA seq
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MMIWMRLPNRGKEKEADGTVGQIPAETMADDFDIEAMLEAPYRKDEIKSSSANGHEERSS
KKKKRSHSRSSRSPSSDKRRSKSKDRKKSRDRKRSKSREKKRSRSKERRRSGSHSRERAG
RYRGRRSPFLGPKFNGGPGGKIGPPHANKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEER
DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFLEANSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEDMLRGIF
EPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGNVTERT
DSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSMHSSSI
HFGNMAAGTAVANPAMNLGPSMNQAMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQD
DVMEECNKHGGIVHIYVDKNSPQGNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPL
PTYHNLFPDSVTATQLLMPSRR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctggatgagactgccaaatcgaggaaaagaaaaagaagcagacgggacggtg
ggacaaatccctgcggagaccatggcagacgattttgacattgaggctatgctagaggct
ccatacagaaaggatgagatcaagtcctctagcgctaatggacatgaggagcgcagtagt
aagaagaaaaagaggagccacagtaggagtagtcggagcccgagctctgacaagcgcaga
agcaagagcaaagacaggaagaagagccgggacaggaagaggagcaagagtcgggagaag
aaacgcagccgcagtaaggagcgccgccgcagcggctcccatagcagggagcgtgccggg
cgctacagaggacgccgcagcccctttttggggccgaaatttaacggtggtccaggaggg
aagattggcccaccacatgccaacaaactaagtcgtaggcgctcaagaagtcgtagtccc
ttcaagaaagacaagagtccagtaaggcaaccaattgacaacctgaccccagaggagagg
gatgcccgtactgtgttctgtatgcagctggcagccagaatccgaccacgagatctagag
gacttcttctctgctgtggggaaagtgagagacgtgaggatgatctccgatagaaactcc
aggaggtcaaagggcatcgcctacatagagtttctggaggcgaattcggtcccattggcc
attggcttgactggacagagacttcttggagtgcccatcattgtccaggcctctcaggct
gagaagaacagagcagcagcaatggccaacaaccttcagaagggtaatgctggccccatg
cggctgtacgtgggctctctgcacttcaacatcacagaggacatgctgcgaggcatcttt
gagcctttcggaaggattgagagcatacagctgatgatggacagtgaaactgcacgatcc
aaaggatatggtttcatctcatttgcagatgcagagtgcgctaagaaagcattggagcag
ctgaatggctttgagctggccggacggcccatgaaggttggtaacgtgacagaacgcacc
gactcctccaccgccagctccttcctggacaacgatgagctggagaggacgggcattgac
ctgggcaccactgggcgcctgcagctcatggcccggctggcagagggtactggtcttcag
attcctccagctgcacaacaggctctacagatgagtggttccatgcactcctcttcaatc
cacttcggcaacatggcagctggtacagctgtcgccaaccctgccatgaacctgggtcca
agcatgaaccaggccatgaacctcccaactcaaccactggctacacactgcctacagctg
tccaacatgttcagcccacagtcggaaaatgagcctggttgggacatcgagattcaagat
gacgtcatggaggagtgcaacaaacatggtggaattgtccatatatatgtcgacaagaac
tcacctcagggcaacgtgtatgtaaaatgccccactatcccaacagcgatggctgcagta
aatgccctacatggacggtggtttgcaggtaaaatgatcactgcggcgtacgtacccctc
ccaacctaccataaccttttccctgattcagtaacggccacccagctactgatgccttcg
cggcgataa
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