Oncorhynchus gorbuscha (pink salmon): 124045680
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Entry
124045680 CDS
T07892
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320
PPAR signaling pathway
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124045680
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124045680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124045680
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124045680
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124045680
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
124045680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
124045680
NCBI-ProteinID:
XP_046221147
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All DBs
Position
LG10:complement(21696379..21719988)
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AA seq
634 aa
AA seq
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MSFELGTLDLAEMDNRMNSCDMKTLSTLDHLYLSSLEHSLNSPHHHSPDRNHLFNHSSDR
YYSFNHSPDINHSFNHSPDINHSFNHSPDINHSFNHSPDINHSFNHSPDINHSFNHSPDI
NHSFNHSPDINHSFNHSSDINHSFNHSPDRNHSSNHSPDINHSFNHSPDRNQSFNHRPDR
NQSFHHSPDRNHSSNHSPHRIHSFNYPYNYTYSEYQCSLKEESMSPLWSSNCSVVSLSRR
TLHSKSPTYTDPSTLLYIDCRVCGDTASGFHYGVHACEGCKGFFRRTMRLKLVYHHCDLH
CRIHKKSRNKCQYCRFQKCLLVGMSRDAIRFGRMPQEEREKLLAEFMDVSPRSPESADLR
ALSRQLCLSYHRHFPLTKSRARAILSGKTHENSPFVIHDMKSLTAGQDFINSRQFPFLEH
QRSVLPPQEPAGELELFFFRQVQFRTAEAVREIIEFAKSIPGLTELDINDQVTLLKYGVI
EVMLIMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEMMEPKFEFAVKFNVLELDDSD
TALFLAVIILSGDRPGLVNVKPIEDLQEAVLQALELQLKTIHPDCPQLFARLLQKMTDLR
PLVADHVRLIHLLKKQELETCLHPLLQEIMRDLY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgagctgggcacattggacctggcagagatggacaacaggatgaatagttgt
gacatgaagaccctgtcaaccctggaccacctttacctctcctccctggagcacagcctc
aacagtccccaccaccacagcccagacagaaaccacttattcaaccacagctcagacaga
tactactcatttaaccacagcccagacataaaccactcattcaaccacagcccagacata
aaccactcattcaaccacagcccagacataaaccactcattcaaccacagcccagacata
aaccactcattcaaccacagcccagacataaaccactcattcaaccacagcccagacata
aaccactcattcaaccacagcccagacataaaccactcattcaaccacagctcagacata
aaccactcattcaaccacagcccagacagaaatcactcatccaaccacagcccagacata
aaccactcatttaaccacagcccagatagaaaccagtcatttaaccacagaccagacaga
aaccagtcatttcaccacagcccagacagaaatcactcatccaaccacagcccacacaga
atccactcattcaactacccatacaactacacatacagtgagtaccaatgttcgttaaaa
gaggagtccatgtcccctctttggtctagcaactgtagcgttgtcagcctgtccagacgc
actcttcactccaagtcccccacttacacagaccccagcactctgctctacattgactgc
agagtgtgtggggacacggcctcaggcttccactatggagtccatgcctgtgagggctgc
aagggattcttccgaagaaccatgaggttaaaactggtgtatcaccactgtgatctgcat
tgtcggattcacaaaaaaagccggaataaatgccagtactgtcgctttcagaaatgtctg
cttgtgggcatgtcacgcgatgccatccgctttggccggatgccccaggaggagagagag
aagctgctggctgagtttatggatgtgtcccccaggagcccagagtcagcggacttgaga
gccttgtccagacagctatgtctgtcctatcacagacactttcccctgaccaagagcagg
gccagagccatcctgtctgggaagacccacgaaaactcaccgtttgtcatccatgacatg
aagtccctgacagcgggtcaggactttataaacagtagacagttccctttcctggagcac
cagaggtctgtcctgccccctcaagagcctgccggggagctggagctcttctttttccgg
caggttcagttccgcaccgcagaagctgtacgagaaatcatagagtttgccaagagtatc
cctgggttgacagagctggacataaatgaccaggtgaccctgctgaagtacggggtcatc
gaggtcatgttgatcatgctggcgccgctgatgaacaaggacggcacactgttcgcctac
ggacagatcttcatgacccgggagttcctcaagagtctgaggaagcccttctgtgagatg
atggagccaaagtttgagtttgctgtaaaattcaacgtgctggagctggacgatagtgat
acagcgctcttcctcgctgtcatcatcctcagtggagaccgtccaggcctggtgaatgtg
aagcccatcgaggacctccaggaggcagtactgcaggccttggagctgcagttgaagacc
atccacccagactgcccccagctgtttgccaggctgctgcagaagatgaccgacctgcgg
ccgctggtggctgaccacgtccggctcatccacctgctcaagaagcaggagctggagacg
tgtctgcaccccctactacaggaaatcatgagggacctgtactag
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