Oncorhynchus gorbuscha (pink salmon): 124045768
Help
Entry
124045768 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124045768
03036 Chromosome and associated proteins [BR:
ogo03036
]
124045768
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124045768
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124045768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
IQ_SEC7_PH
WD40_CDC20-Fz
CFAP43_N
Beta-prop_Vps41
DUF7675
DUF6059
Motif
Other DBs
NCBI-GeneID:
124045768
NCBI-ProteinID:
XP_046221318
LinkDB
All DBs
Position
LG10:26649207..26679249
Genome browser
AA seq
1405 aa
AA seq
DB search
MASPPPPPPPTSVPVSNMASKMEEEEEGMKFDFDNSDEECSTTPANSVSTMAKGFEATVM
AGLASKRNTMGPSSAQDPTVKPRLNGWPSVGKEDQSMHSLPHSNSSEMAGRRSPEGRSEL
GLSGDTEGSGRRNSIYEAGSMNECYYTPILKADHIDTQTVQAPYGATSAKEWFSVVSELT
LRLHKGKPPPILDVGGPGDAASPENENVSSPEGLQSPDGLACTDSPPSPTSPDNVMTDPT
LRHDVTNWTSPDDIIMTSPEAIFRTSRPEVIYDDVPCESLLSPLEDDIYEDVQRPESHHG
TNNGWSDSEFESYDEQSDSETKIPSVARSSSKLSQDMWRLKERCAKTKQDLAMRSCDFKV
QMLMKAARNGTKDGLEKTKLAMMRKVSFLQKKETAEESDDDAGYLDVMVSEVKHPPPQLS
PMPKGLSTQQIIRRHIVGSIVQSERSYVDSLKRILVEYQKPLLEPEARILSDKKVRPIFY
RLREILQCHSMFQIALASRVAEWDLSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALI
KKACISKPAFLEFLKKKQVSSPDRITLYGLMVKPIQRFPQFILLLQDMLKNTPRAHPDRL
PLQLALTELETLAERLNEQKRVADQVAEIQQLARSIGDRQLSKLLNSDQRQLILCEVLIE
TVYGEKGQILKSKERKVFLLNDTLICANINVKYENHGIDSVINEQRGPPDISSLVPIGPK
YTVKWSAPLLQTQVVEVGQESFQSKDTGKRPNVANVPGKVFLGPPRLYQELEELQHDLYV
VENITLLVGTLQGTYQNLNTTVGQDWCLALQRLIHIKDEQIQCANKCRLRLAVPGKPDKS
GRPVSFMVVFNTPSPLSKISWVNRLHLAKIAKREENTPGWVFAEDDGKTRHPFWCPLLAC
RLPIFSSKTQDQKLETALHNPVQCALLAFSAASTSLPQGYLWVASGGDRNHGQVEIFSLN
RSMPRMVKSIQMGAPVLCLDHVMEPCPTEEEGEGEAAVKSTARTGNTICVGLQDGNIHVY
GTVDTSTQCLLTFSNPDSCPVLCLKHSASFLFAGLGNGKVSVYARKSGEGLWDPESCRLV
TVGSGPIRTLLTLENAVWASCANHVTVIQGSSLHTQSFDAHPGPLVSVSHMLRAGGGVWM
AFSEGSSIRLFHTETLEHLQEINISTRSTFLSPGQQGSVRVTSLLICQGLLWVGTAQGII
VTLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVVTSSTLSPDMLKRDSVCETADQANGGA
GGGEDGERRNELSQESLSQPDCSSPQGEPSKAKGMLLQYRLRSTTQLPGKLLTAEPDQSP
CDAPPETPEHSPEDGSIYELSEDPEVWVRGQPPAREGRGKDKVTSAAVFSGGRGFRRLGE
ETIAANGDPDESTLMVWQLPLTVSP
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccaccccccccaccccctccaacctcagtgcctgtgtccaacatggcctct
aagatggaggaggaagaggaaggtatgaagtttgactttgacaacagtgatgaagagtgc
agtacgacaccagcgaactctgtctctaccatggccaagggctttgaagccactgtgatg
gcggggcttgcatcaaaaaggaacacaatgggccctagttctgcccaagacccaacagta
aagccaaggctcaatggatggccgtctgttggaaaggaggaccagagcatgcattcactc
cctcattccaatagctcagagatggctggaagaaggtctcctgagggccgctctgagctg
ggattgtcaggagacacagagggctctgggagaagaaatagcatttatgaagcaggatct
atgaatgagtgctactacacccctatcttaaaggctgaccacatagacactcagacagtt
caggcaccgtatggagccacctcagccaaggagtggttcagtgtggtctcagagctcact
ctgcgactgcataaagggaaacctccccctattcttgatgtaggaggtccaggtgatgca
gcaagtcctgaaaatgaaaatgtgtctagtccagagggcctgcaaagtccagatggtctg
gcttgcacagacagcccacccagccccaccagtcccgataacgtcatgaccgatccaacc
ctccgccatgacgtgaccaactggaccagccctgatgatatcatcatgactagtccagag
gccatctttaggaccagtcgtccagaggtcatctatgatgacgtgccctgtgagagcctc
ctctctcctctggaagatgacatctacgaggacgtccagaggccagaaagccatcatggc
accaacaacggatggagcgacagtgagtttgagagctatgatgagcagtcagacagcgag
acaaaaatacccagtgttgcgcgaagcagtagtaagctttctcaggacatgtggcgactg
aaagagcgctgtgccaagaccaagcaggatctggccatgcgcagctgtgacttcaaggtc
cagatgctgatgaaagcagctagaaatggcaccaaggacggactggaaaagactaagtta
gctatgatgcgtaaagtctctttcctgcagaaaaaagaaaccgcggaggagagtgatgat
gacgctggttatctggacgtgatggtgtctgaagtgaagcacccaccgccccagctgagc
cctatgccaaaggggcttagcacccaacagattatcagacgccacatcgttggttccatt
gtacaaagtgagaggagttatgtggactctctcaagagaatcttagtggagtaccagaag
cccttgcttgagccagaggcccggatcctgagcgataagaaggtgcggcccatattttac
cggctgcgggagatcctgcagtgccattcaatgttccaaatcgccctggcatcccgtgtg
gccgagtgggacctcagtgagaagatcggagacctctttgtggcctcgttttccaagtca
atggtactagacgtgtacagcgactacgtcaacaacttcactaacgctatggcgctcatc
aagaaagcctgcatttccaagccagctttcctggagtttctcaagaagaagcaagtgtca
agtcctgacagaatcactctttatggccttatggttaaaccaatccagcgcttccctcag
ttcatcctgctgctacaggacatgctgaagaacactccccgggcccaccctgaccgcctg
cccctgcagttggccctcactgagctggagacgttggccgagaggctgaacgagcagaaa
cgagtcgctgaccaggtcgctgaaatccagcagctggcacgcagcattggtgaccgtcaa
ctgagcaagctcttgaactcagaccagaggcagctgatactgtgcgaggtactgattgag
acagtgtacggggagaaaggacagatccttaagtccaaggagcgcaaagttttcctgctg
aacgacaccctcatctgtgcaaacatcaacgtcaaatatgagaatcacggcattgatagt
gtcataaatgaacaaaggggtccccctgatatcagcagtctagttcccattggtcctaaa
tacacagtgaagtggagtgcccccttgctgcagacgcaggtagtggaggtgggacaggag
agcttccagagcaaagatactgggaaacggccaaacgttgctaatgttcctggtaaagtg
ttcctgggccctcccagactctaccaggagctggaggagctacaacacgacctgtatgtg
gttgaaaacatcaccttgctggtggggactttacaaggcacctaccagaacctgaacaca
acagtagggcaggactggtgccttgcactgcagaggctcatccacatcaaagatgaacag
atccagtgtgccaacaagtgccgcctgcggctggctgtgccaggcaagcctgacaaatct
ggacgaccggtcagttttatggtggttttcaacactcccagtcccctcagcaagatctcc
tgggtcaaccgcctacacctcgccaagatagccaagagggaagagaacacgccaggctgg
gtgtttgcagaggatgatgggaagactagacatccattttggtgtcccctgctagcctgc
cgacttcccatcttctcctccaaaacacaagaccaaaagctggagacggcccttcacaac
ccggtccaatgtgccctgctggctttctctgcagccagcacctctctgccgcagggctac
ctttgggtggccagtggaggtgaccgcaaccatggtcaagtggaaatcttctctctgaac
cgctccatgccgcgcatggtcaagtccatccagatgggggcgccagtcctgtgtctggat
cacgtgatggagccttgtcccacagaggaggaaggggagggggaggctgctgtcaagagc
acagccaggactggcaacaccatctgtgtaggcctgcaggatggcaacattcatgtgtac
ggtaccgtggacacttcaacccagtgcctgctgaccttctccaacccggacagttgtcca
gttctgtgcctgaaacactctgcctccttcctgttcgctgggctggggaatggaaaagtg
tctgtttatgctcggaagagtggagaggggctgtgggaccctgaatcgtgcaggctggtg
actgtgggcagtggccccatccgcaccctcctaaccctagagaatgctgtgtgggccagc
tgtgccaaccacgtcaccgtcatccagggctccagcctccacacacagagttttgacgcg
caccctgggccactggtcagtgtgagtcacatgttgcgggcggggggaggggtgtggatg
gccttttccgagggctcatccatccgcctgttccacacggagacactggagcacctgcag
gagatcaacatctccacacgctccaccttcctcagcccagggcaacagggcagcgtccgg
gtcaccagcctactcatttgccaggggctgctgtgggtgggcactgcccaaggcatcatc
gtcaccctgcccgtgcccaaactggagggtatccccaaaataacaggtaaagggatgacg
tctctaaacgctcactgtggccctgtggatttccttgtggtcacctccagcaccctgtcc
ccagacatgctcaaacgggattctgtctgcgagactgccgaccaggccaatgggggagcg
ggaggaggagaggatggggagcggaggaatgaattgtcccaggagtcactctcgcaacct
gactgctcctcccctcagggagagccctccaaggccaagggaatgctgcttcagtatcgc
ctccgctcaaccacccagctgcccggcaagctgctgacagccgaacccgaccagagccca
tgtgacgccccaccggagaccccggagcacagccctgaggacggctctatctatgagctg
agcgaggaccctgaggtatgggtacgggggcagcccccggccagggaggggcgtgggaag
gacaaggtgacctcggctgccgtcttctccggaggcagggggttccgtcgacttggggag
gagactatagcagccaatggggacccagatgaaagtacgctcatggtttggcaactccca
ctaacagtgagtccatga
DBGET
integrated database retrieval system
