Oncorhynchus gorbuscha (pink salmon): 124045804
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Entry
124045804 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124045804
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124045804
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124045804
Protein kinases [BR:
ogo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
124045804
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124045804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-B_box_Trim66
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
124045804
NCBI-ProteinID:
XP_046221403
LinkDB
All DBs
Position
LG10:complement(27607838..27627569)
Genome browser
AA seq
1333 aa
AA seq
DB search
MADNKGEEDMESSSKLDSEPQGEDSGDPELKDVNPLIAIETNLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEGSISSNVSPVGNTNGGTTELKNENAVIVIESISKEGED
SQSQENISQVPTPANVSGGGDASSNSAGAVGEGSTSNSPVGNTNGGTTESSAAGDTAGTS
PALTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQARDCEPKLLPCLHSFCLKCIPLPE
RQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQMC
TSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVFC
PIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKTY
VHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKLL
TQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGA
VRFFCDPTFWAKNVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQ
LRQQHMQQQAFAQQKQQQQHQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQ
HQQQQHQQQQQHQQRIQEQMRIASQMSQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGG
PNMYPPHHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQMTVDSEMSDHRFRLLH
LTGHSNPGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNP
ENLPCLPNIPPIQLEDAGSSSLDALLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSS
GLSNSHTPVRPSSTSSTGSRGSCGSAGRPGPASGPMEQQVKVKQEPGAEKECGFSGTTTS
NVKTEQGKDGGRSACMMSNSESRCTPPLPLLGSVTSGSSVQDILKKVGEHVKTEPQDQEA
CSGANRPGNAPITTSSTSTVASAALLTNGKGAASAALRSPRTAQGTNQSGAGGKEDDPNE
DWCAVCNNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEP
RDEKDISEQGLSPEDQRRCERLLLYVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVK
QKLQLKHVQHYQSPKEFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGK
AVSLYFEERLLELYPDESFPEVPEEPEVPEVPEEPQAPAGEGEEADLTEDSEDEFVQPKR
KRLKTDEKPMHIK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
caaggagaggatagcggagacccagaattgaaagatgtgaatccgctgattgccatagag
acaaatttgaaagaaggagaggattcacaatcccaggagaatgtttcccagatgcctaaa
cccgctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagaaggcagcattagcagtaatgttagccctgttgggaacaccaatggtgggacaacc
gaattgaaaaatgagaatgcggtgattgtcatagagtcgatctcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcggaggaggg
gacgctagcagcaacagcgcgggcgcagtgggagaaggcagcactagcaacagcccagtt
gggaacaccaatggggggacaaccgagtcttcggctgctggggatactgctggaacctca
ccagcactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtcatc
ccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccaggcccgtgactgt
gaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgccagag
cgacaagttaccgtacaggtgcctgggccgaacggacagccagacacccacatagtgaat
gtcatgcggtgtgtagtttgttgtcaagactgcaaacaaagtgacatcattgacaactac
tttgtcaaggacaccaccgaggcctccaagacttcagatgaaaaatctgcacagatgtgc
accagttgtgaggacaatgccgataccattgggttctgtgcagaatgtggagagtggttg
tgcaaaacctgcatcgaggctcaccagagggtcaaaatcaccaaggaccacaaaatccgc
aagaaagaggatgtctctgaagagtctgtaggtgtgtcggaacagaggcctgtgttctgt
cccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacctgc
cgggactgccaactgctggagcataaggagcacaggtaccagtttctggaggaggccttc
cagaaccagaaaggcatcattgagacgcacatggtcaaactgcaggagaaaaagacctac
gttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccataag
aaggtggaacatgacatcaagatagctgtattcactcttatcaacgaaatcaacaagaag
ggcaagtatttactgcagcagcttgagagtgtgactaaggagaggagcatgaagctgttg
acccagcagaccgacatcgccaacctggccaggcagatcctccatgtgctcaacttcacc
cactctgccattaacagcggcagcagcaccgccctgctttacagcaagaggctgatcatc
taccagctgcgcaaggtcctgaaggctggactggaaccagtgcctcaggctaacggagct
gttcgctttttctgtgaccccacattctgggccaagaacgtggtcaacctagtagggaac
ctggtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatc
tccccgggccacggccacccaggccacggaaaaagccctgggcagatcaatctggcccag
ctccggcagcagcacatgcaacagcaagccttcgcccagcagaaacagcagcagcagcac
caacaacaacagcagcagcaccaacaacagcagcagcagcagcagcaacaacaacagcag
cagcaacaacaacagcagcaacaacaacagcagcaccaacaacaacaacagcagcagcag
caccaacagcagcagcaccaacaacagcagcaacaccaacagaggatccaggaacaaatg
cgtattgcctcccaaatgtcccagcagcaccccaggcaggctgtacctcagatggtacag
cagcagcccccgcgcctcatcagtatgcaggcccagcagaggggccccatgaacggcggg
cccaacatgtaccccccccaccacctgcgcttgcccccgggacagggccgcatgcccagc
tccagtgcccagccacgcatgcccaacggccagcagtactcccccatgatgcagccccag
ctgcagagacagatgactgtagattctgagatgagcgaccacaggtttcgtttgttacat
ctcactgggcattcaaacccaggtcatgctggacccttcccagtggcatctctccacaac
gtgagcgctgccaaccccaccagtcccaccagtgccagcatggccagcgcccatgcccac
cgtggccccgccagccccatagtgggcgccatcgacctcatcccctccgtcaccaaccca
gagaacctgccatgcctaccaaacatcccccccattcagctggaagacgcgggctccagc
agcctggatgccctactgagtcgctacatcttagccagcacatacccacagctgggcctg
gggccccccgggaacatgaacctctcccacggaccctccacacactcccctggctcctca
ggcttatcaaactcccacacgcctgtgcggccatccagtacgtccagcacaggaagcagg
ggcagctgtggatctgcgggtaggccagggccagcaagcggcccaatggaacagcaggtc
aaagtcaagcaggagcccggagctgagaaggagtgtggtttctcgggaaccaccacctcc
aacgtcaaaacggaacaagggaaggatggagggaggagcgcgtgcatgatgagtaattca
gagagcagatgtactccccctctccccttgttgggctctgtgacttctggctcctctgtc
caggacatcctcaagaaggtgggagagcatgtcaaaactgagccccaggaccaggaggcc
tgcagtggggccaacaggcctggcaacgcccctatcaccaccagcagcacatccactgtg
gcctctgccgcactgctgaccaatggtaagggagccgcatccgctgccctgcgctctcca
cgcactgcacaggggaccaaccagagcggggcaggagggaaggaggacgaccccaacgag
gactggtgtgctgtgtgcaacaacgggggagagctgctttgctgcgaccgctgccccaaa
gtcttccacatcacctgtcacatccccaccttgaagtgctccccgagtggtgagtggatg
tgcacgttctgccggagcctggcaagcccggagatggagtaccagcctgacgacgagcct
cgtgacgagaaggacatcagtgagcagggcctgagtcctgaggaccagaggaggtgtgag
cgcctcctgctgtatgttttctgccatgatctcagtgaggggttccaggagcctgttcct
ccctctatccctaattactacaagatcatcaagaagcccatggacttgaccctggtgaaa
cagaagctacagttgaagcatgtccaacactaccagagcccgaaggagtttgtctcggat
gtgcgcctggtcttcagcaactgtgccaagtacaatgagatgtctcgaataatccaggta
tatgatgaggagaaacagagtaatgtgcaggcggactctgaggtggcggaggcagggaaa
gctgtgagtttgtactttgaggagaggctgctggagctctatccagatgagagtttccct
gaggtaccagaggagcccgaggtaccagaggttcccgaggagccccaggccccagctgga
gagggagaggaggcggatctcacagaagactccgaggatgagtttgtgcagcctaaacgc
aagcggttaaaaacggatgaaaagccgatgcacatcaagtga
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