KEGG   Oncorhynchus gorbuscha (pink salmon): 124045927
Entry
124045927         CDS       T07892                                 
Name
(RefSeq) lysine-specific demethylase 5C-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ogo01009]
    124045927
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogo03036]
    124045927
Enzymes [BR:ogo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     124045927
Protein phosphatases and associated proteins [BR:ogo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124045927
Chromosome and associated proteins [BR:ogo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124045927
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD SNAD4
Other DBs
NCBI-GeneID: 124045927
NCBI-ProteinID: XP_046221697
LinkDB
Position
LG10:complement(33804847..33824728)
AA seq 1595 aa
MAMEGEDFVPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DSFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLSKVVI
EEGGFDIVSKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFEVFHTGASLPQTKPKL
YDGEEVHREYKPHSIPLRQSVQPSKTSSYGRRANRLQPDGPEDSAPYPLSTGSQHISTSP
DPTEEDIEKNPELKKLQIYGAGPKMMGLGLVPRNKSIPKKEELPQTVTVRAAAPAVQVKE
QPGEVKEKGDGTTTTTAPPPSDATIKSEVKKEEEKHEGVAAHDSGDQDSGENGDGPCTKM
TMRLRRNLGNPQFVDSFVCRMCGRGDEDEKLLLCDGCDDNYHTFCLLPPLTEAPKGNWRC
PKCVAEECKRPAEAFGFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEREFWRL
VSSIEEDVTVEYGADIHSKEFGSGFPMNNGMKNLSQEEADYARSGWNLNVMPVLEQSLLC
HINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEQLEEV
MKKLTPELFEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQG
YNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATHR
EMFSIVQEERELRKGLLERGITEAEREAFELLPDDERQCDNCKTTCFLSALACSNCTERL
VCLYHTQDLCNCPTDKLYLRYRYTLDELLAMLHRLKVRAESFDSWANRVKEALEQEEGNK
TGVTDLEVLKAEAAEKKFPDNELLQRLNTTLTDTQHCQQTSTELLNKTLTRRMTLAELKA
LVEKMENLPCVISQLEDVQAVLRTIEEFQTQAQALVSDRDWRRDAPPPEQLQALLEQGAG
LPVDAPECELLKGMQEQSRWLGEVRRTMGPEGSEVTLVVLRSLMEAGCIVPQSVSVETAM
AELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILSLRGCLSRAR
AWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVRMEELRQLELQVASAHSWRDKASKTFL
KKSSQHSLLQVLCPCVEKRKARGEETGCLDDTDTNTLGLSAQDLRDPGAIVTAFKEGEHQ
EKEALLRLQQDNLTKPGVEKKEKEVKTEQEDKENGGARWGEDPMELDTALHSENCGKGNG
DSNHTTTGSASPPQSVCVCGRAPRPPLLRCHLCKDWFHGGCVPFPSLLLPSAPPTNPLCW
WDWDSRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEA
LDSPEIQGALEKLQELKQKQPHREGEEEEDGKKGNSESVIVLSDSEGGEGEGVIDLTEEN
SPKKTPKKEMNGGTQAGCENGISRYNVTGVGSLLPLVPSLKGPVIELSLTTRTQLEELQL
EGDLLEVSLDQTSTIHRVLQAASEPQRHTLQTLILIELQEQKGAGRGGRAKDKRKRKSQR
GDTGAEGGPRSQDTSESKKTRPLNHIPIQTHPEIL
NT seq 4788 nt   +upstreamnt  +downstreamnt
atggcgatggagggggaagattttgtgcctcctccggagtgcccagtgttcgagccgtca
tgggaggagtttcaggatcccctgggctacattgccaagatccgtccaattgcagagaag
tctggaatctgcaagattcgtcctcctgctgactggcagccaccctttgctgtggaggtg
gatagcttccgcttcacaccccgtatacagagactcaatgagctggaggcggagacacga
gtcaagctaaactacttggaccggattgccaagttctgggagatccagggatcctctctc
aagatcccgaacatcgagaggcgcatcctggacctcttcagcctgtccaaggttgtgata
gaggagggagggtttgatatagtcagtaaggagaggcgctgggctcgtgtggcccagaag
cttggctaccctccaggcaagaacattggctccctcctgcgctcacactacgagaggatt
gtctacccctttgaggtgttccacactggtgccagcctgccgcagactaagccaaagcta
tatgatggagaggaggtgcatagagaatacaagccccactccatccccctacgccagtct
gtccagccctccaagacgagcagctacggacgcagagccaatcgtctccagccagacggt
ccagaggattctgccccctaccctctctccactggctctcaacacatctctacatcgcct
gatcccacagaggaggacatagagaagaatccagagctgaagaaactacagatttacggt
gcagggcctaagatgatggggctaggactggtgcccaggaataagagcattcccaagaaa
gaagagctgcctcagaccgtgactgtccgggctgcagctcctgctgtccaggtcaaggag
cagccaggggaggtcaaagagaaaggagatggcaccacaaccacaacggcacctcctccc
tctgatgccacgataaagagtgaggtgaagaaagaggaagagaaacatgaaggtgtagca
gctcatgacagcggggaccaagacagtggtgaaaacggtgacgggccctgcaccaagatg
accatgaggctgagacgtaacctcggcaaccctcagtttgtggattcgtttgtgtgccgg
atgtgtggccgtggcgacgaggatgagaagctcctgctgtgtgacggttgtgatgacaac
taccacaccttctgtctactgccccctctcactgaggcccccaagggcaactggcgctgt
ccaaaatgtgtggctgaggagtgtaaaaggccagcggaggcctttggttttgagcaggct
actagggaatacaccctgcagagttttggggagatggccgacaccttcaaagcagactac
ttcaacatgcctgtccatatggttccgacagagctggtggagagagagttctggcggttg
gtcagtagtatagaggaggacgtgacagtggagtatggagccgacatccactctaaagag
tttggcagtggattccccatgaacaacggcatgaagaacctctcacaagaggaagcggac
tatgcccggagcggctggaacctgaacgtgatgccagttctggagcagtccctgctgtgc
cacatcaacgcagacatctctggcatgaaggtgccctggctctacgtgggcatggtcttc
tccgctttctgctggcacatcgaagaccactggagctactccatcaactacctgcactgg
ggtgagcctaagacgtggtacggggttccctctgtagcagcagagcagttagaggaggtg
atgaagaagctgaccccagagctgtttgagttccagcctgacctcctccaccagctggtc
actattatgaaccccaacatcctcatggctcacggggtcccggttgtgcgcaccaaccaa
tgtgctggtgagtttgtcatcactttccccagagcctaccacagcggcttcaatcaggga
tacaactttgctgaagctgtaaacttttgcactgcagactggctgcccgcaggccgctcc
tgtatcgagcactaccgtcgtctgagacggtactgtgttttctcccacgaggagctgacc
tgtaagatggccgcctgcccagagaagcttgacctcaacctggccgctgccacgcacaga
gagatgttcagcatcgtccaggaggagagggagctacgcaagggcttgctggagaggggc
atcacagaggctgagagggaggcgtttgagctgctacctgatgatgagaggcagtgtgat
aattgcaagaccacctgcttcctgtcggccctggcctgttcaaactgcactgaacgcctc
gtctgtctctaccacactcaggacctctgtaactgccccacagacaaactctacctcagg
tacaggtacacactggatgagctgctggccatgttacaccggctcaaagtgcgagctgag
tcatttgattcctgggccaacagagtgaaagaggctctggagcaggaagagggcaacaag
acaggtgtcacggatctggaggtgctgaaggcagaggcagcagagaagaagtttcctgac
aacgagctgctccagagactcaacactaccctcactgacacacagcactgtcagcagact
agcactgagctcctcaacaagacactgaccaggaggatgaccctggctgaactcaaggct
ctagtggagaagatggagaacctgccctgtgtgataagccagcttgaggacgtacaggcg
gtcctgcgtacgatagaggaattccagactcaggcccaggctctagtgagtgacagggac
tggcggcgagacgcccctcccccagagcagcttcaggccctgttggagcagggggctggc
ttacctgtcgatgcccctgagtgtgagctcctgaaggggatgcaggagcagagccgctgg
ctaggcgaggtgcgccggaccatgggtcccgaggggagtgaggtgaccctggtggtcctc
aggagcctgatggaggcgggctgcatcgtgccccagagcgtctctgtggaaacggccatg
gcagagctgcaggagctgctgacgatagcagaacgctgggaggagaaggcccagatctgt
ttggagcaacggcagaagcaccctctgtccaccttggaggccatagtgaacgaggcccag
ctcatcccagtcaagctgcccaacatcctgtctctccggggctgtctgagccgggccagg
gcctgggtcactgacctggaggagatccagaatggggagcactacccgtgtctggatgac
ctggagggcttggtggcgatagggagagacctgccagtcaggatggaggagctgaggcag
ctggagctgcaggtagccagcgcccactcctggagagacaaggcctccaagaccttcctg
aagaagagcagccagcacagcctgctacaggtgttgtgtccgtgtgtggagaagcgtaaa
gcgaggggagaggagacgggttgtttagatgacaccgataccaacactctaggcctttct
gctcaggacctgagagaccctggagccattgtgacggcgtttaaagaaggagagcaccag
gagaaagaggctctgctgaggctccagcaggacaacctgactaaaccaggtgtggagaag
aaagagaaagaggtaaagactgagcaggaggacaaggagaacggaggtgcgaggtggggg
gaggaccccatggagctggacacagctctccactctgagaactgtggaaaggggaatggg
gacagtaaccacacaacgacaggcagtgcctctcctccccagtcagtgtgtgtgtgtggc
cgggcgcctcgcccccctctgctgcgctgccacctgtgtaaagactggttccatggtggt
tgtgtcccgttcccctccctcttgctcccctcagcgccccccaccaaccccctctgctgg
tgggactgggactcacgcttcctgtgcccccggtgccagcgctcgcggcgcccgcgtctg
gagaccatcctggccctgctggtggccctccagaggctgcccgtccgtctgccagaggga
gaggctctgcagtgtctcacagagagggccatcacctggcaggggcgcgccaaggaggca
ctggacagcccagagatacagggggcactagagaagctgcaggagcttaaacagaagcag
cctcacagggagggagaggaggaggaggatgggaagaaagggaactctgagtcggtgata
gtgctgtcggattctgagggaggggagggagagggagtgatagacctcacagaggagaac
tctcccaagaagaccccaaagaaagagatgaacggtggcacgcaggctggatgtgaaaac
ggcataagccgttacaatgtaacaggtgtgggctctctgctgccgctggtcccttcacta
aaaggcccagtgatcgagctgtccctgaccaccaggacccagctagaggagttgcagctg
gagggagacctgctggaggtgtctctggaccagaccagtaccatccacagggtcctccag
gctgcttcagagccacagagacacacactccaaacactcatactgattgagctccaggag
cagaaaggggcgggccgtggggggcgggccaaggacaagaggaagaggaagagccagagg
ggcgacacaggggcggagggaggaccccggtcccaggacacctcagagtccaagaagacc
cggcccctcaaccacattcccatccagacacaccccgagatcttatga

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