Oncorhynchus gorbuscha (pink salmon): 124045978
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Entry
124045978 CDS
T07892
Name
(RefSeq) POU domain, class 6, transcription factor 1-like isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124045978
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124045978
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124045978
NCBI-ProteinID:
XP_046221798
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Position
LG10:35296671..35307312
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AA seq
640 aa
AA seq
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MDLQDLPAADTPLTVNEQVIVMSGHETIRVLEVEVDQASLPSSMPDGRADLGGEDVSNQA
KQPEAGTQDSPPAPHNTGGVGEPFVGYRYVLGDQVVAVDSAASAVQTLAQTAVPISVSLS
QPQATMPITVQSLQGCQQVLTQDGLATLMTGMMAQTGSLGQPLLIPLSMAGSMGGQGLAV
LTFPTSNVATLPGLSAASQSGGLLKLPFASLQGLQGLQTATVLNPVQTQQAVFQSQTASL
QQVQAAMQQAQQNTQVAAAQLTQAMPSVSQPSVSVSTLQSAGLSINPAINNMFWMPPFLS
SQISAASLGAQPQFISSLTSTPIITSAMSGITSQIITNAQGQVIGTIPLMLNPASLTGGA
ATQALNLQGFQGLQVQTVQPQLVLNNQGQIIATIGNGPATVPTSAAIIPKHNVPVTFSKP
STQAQVTTVTQSPVVIAPQPFAMKTVTSISSSVPITCGDTPTVGQLVSKPQQGCTDEEGI
NLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLK
PVLERWLAEAELWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQAIEVLNTYFEKNALPTGQ
EITEIAKELNYDREVVRVWFCNRRQTLKNTSKINVFQVQP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcaggatctccctgctgctgacacacccctcactgtcaatgaacaggtgata
gtgatgtctggtcatgagacgatccgtgtcctggaagtggaggtagatcaagcctctctt
ccatcctcaatgcctgatgggagggctgatttggggggtgaggatgtgagtaatcaggct
aagcaacctgaggcaggaacacaggacagcccgccagcaccccacaacactgggggagta
ggtgagccctttgtaggataccgatacgtgctgggggaccaggtggtggctgtcgattct
gcagcctctgcggtccagactcttgctcagactgcagttcccatcagtgtctccctgtcg
cagccacaggccaccatgcccatcactgtgcagagcttgcagggctgtcaacaggtcctg
acccaggatggtctggccactctgatgacagggatgatggcccagacaggctccctgggc
cagcccctgctcatccccctcagcatggcagggtccatggggggccagggcctggctgtc
ctcacctttcccaccagcaacgtagccacactccctggcctttcagctgccagccagtcc
ggaggcctcctcaaactaccctttgccagcttgcaaggcttacaaggcttgcaaacagcc
actgtactaaaccctgtccagacccagcaggcggttttccagtctcagacagcatcacta
cagcaggtccaggcagctatgcagcaggctcagcagaacacgcaggtggctgcagcacaa
ctgacccaggccatgccgtccgtctctcagcccagtgtgtctgtgtcaacactccagtct
gcaggcctctccatcaaccctgccattaacaatatgttctggatgcctccgtttctctcc
tctcagatcagtgctgcgtctctaggggctcagcctcagttcatcagctctctcacttcc
actcccatcatcaccagtgccatgtctggaatcaccagccagatcatcaccaacgcacag
ggacaggtgattggaaccatccccctgatgctgaaccctgcctcactgacagggggggct
gctactcaggctctgaatctccagggctttcaaggcctgcaggtccagacagtccagcca
cagctggttctgaacaaccagggccagatcattgccaccataggaaatggacctgctaca
gtccccacttctgctgctattattcccaagcataatgttcctgtgacattctcgaagccc
agcacccaggctcaggtaacaactgttacgcaatcacctgtggtcatcgccccacaaccg
tttgcaatgaagacagtcacttcaatctcctcctcagtccctatcacctgtggagacaca
cccaccgtgggacagctcgtcagcaagccacagcaagggtgcacggatgaggagggcatt
aatctggaagagattcgagagtttgccaagaacttcaagatccgccggctgtccctgggg
ctgacgcagacacaagtgggacaggccctgacggctacagagggcccggcctacagccag
tctgccatctgcaggtttgagaagctggacattacacccaagagtgctcagaaactgaag
cccgtgctggagcggtggctggccgaagcagagctatggaaccaaaagggtcagcagaat
ttgatggaatttgtgggtggtgagccgtccaagaaacgcaagcgtcgcaccagcttcacc
ccgcaggccatcgaagtgctcaacacctactttgagaagaatgccctgccaacgggccag
gagattacggaaatcgctaaggagctcaactacgaccgtgaggttgtccgtgtatggttc
tgcaacaggcggcagacactgaagaacaccagcaagatcaatgtgtttcaagttcagcct
taa
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