Oncorhynchus gorbuscha (pink salmon): 124046001
Help
Entry
124046001 CDS
T07892
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124046001
03015 mRNA surveillance pathway
124046001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124046001
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124046001
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124046001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
PhaP_Bmeg
Motif
Other DBs
NCBI-GeneID:
124046001
NCBI-ProteinID:
XP_046221841
LinkDB
All DBs
Position
LG10:37176048..37181762
Genome browser
AA seq
494 aa
AA seq
DB search
MATDSWALAVDKQEASTDSFGSLVIRSLTQGGGDAAPTNKAKKGTTKQVENDTNVEGEEK
EDKAAQSLLNKMIHTSLVNTTNQVEVLQRDPNSPLYSVKTFEELRLKDKLLKGVYDMGFN
RPSKIQENALPMMLAEPVYYPSGSRPQNLIAQSQSGTGKTAAFVLAMLSHVDPTNKWAQC
LCIAPTYELALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGAKLQEQIVIGTPGTVLDWC
SKLKIINPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPKECQMLLFSATFEDSVWKFA
ERVVPDSNIIKLKREEETLDTIKQYYVLCSDKEEKFTALCNIYGAITIAQAMIFCHTRRT
AGWLAAELTKEGHVVALLSGEMTVEQRATIIERFREGKEKVLVTTNVCSRGIDVEQVSVV
INFDLPMDKDGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEEHFNKKINK
LDTDDLDEIEKISN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctactgactcttgggcccttgctgtcgataaacaggaagcttcgactgactcattc
ggctccttggtgataagatctctaactcaaggtggaggtgatgctgcacctactaataag
gcaaaaaagggtaccacaaagcaagtggagaatgacaccaacgtcgagggggaggaaaaa
gaggacaaagcagcccagtcattgttgaataagatgatccacaccagccttgtgaacact
accaatcaagtagaggttcttcagagggatcccaactctcccctttactcggtcaagaca
tttgaagagctgaggctgaaagataagctgctgaagggagtgtatgacatgggcttcaac
agaccctctaagatccaggagaatgccctgcccatgatgctggcagagcccgtgtattat
ccctctggttccagacctcagaacctgattgcccaatcacagtccggtacaggtaaaaca
gctgccttcgtgctggccatgctcagccatgtcgacccaactaacaaatgggcacagtgt
ctttgcattgccccaacgtacgagctagctttgcagactggtaaagtcattgagcagatg
gggaaattctatcctgaggtcaaattggcatatgccattcgtggcaataaattggaccga
ggggcgaagcttcaggagcagattgtcatcgggacacctggcacggtcttggactggtgc
tccaaactgaagatcatcaaccccaagaagatcagcgtctttgtcctggatgaggctgat
gtcatgatcgccacacagggtcaccaggaccagagcatccggatccaaagaatgttgcca
aaggaatgtcagatgctgctgttctctgccacctttgaggactctgtgtggaagtttgct
gagagggttgtgccagactccaacatcatcaagctgaaacgtgaagaggagactctggac
accatcaagcagtattacgtgctttgcagcgacaaggaggaaaagtttacagcactctgt
aatatctacggcgccatcaccatcgcccaagctatgatcttctgtcacacccgaaggaca
gctggctggctggctgcagagctgaccaaggagggccatgtggtggcgctgctgagtggg
gagatgactgtggaacagagagcgaccatcatcgaacgcttcagggagggcaaggagaag
gtcctggtgaccaccaacgtatgctccagaggcattgatgttgaacaagtttctgtggtg
ataaattttgacctgcccatggacaaagacggaaacgccgacaacgagacataccttcac
cggattggtcgcacaggacgtttcggcaagaggggccttgcagtcaatatgattgacagc
aaacacagcatgaacattctcaaccaaatcgaggaacatttcaataagaagatcaacaag
cttgacactgatgatctcgatgaaatcgagaaaatcagcaactag
DBGET
integrated database retrieval system
