Oncorhynchus gorbuscha (pink salmon): 124046107
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Entry
124046107 CDS
T07892
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124046107 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124046107 (l1cama)
04090 CD molecules [BR:
ogo04090
]
124046107 (l1cama)
04091 Lectins [BR:
ogo04091
]
124046107 (l1cama)
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
L1 family
124046107 (l1cama)
CD molecules [BR:
ogo04090
]
Proteins
124046107 (l1cama)
Lectins [BR:
ogo04091
]
I-type lectins (Siglecs)
124046107 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
C2-set_2
C2-set_3
Pur_ac_phosph_N
Ig_5
Sp38
V-set_CD47
DUF4998
Motif
Other DBs
NCBI-GeneID:
124046107
NCBI-ProteinID:
XP_046222075
LinkDB
All DBs
Position
LG10:complement(41155870..41258979)
Genome browser
AA seq
1292 aa
AA seq
DB search
MPRTQRQQVGSRGRRTPLPLLLPLFSLLLSHTPQLSQAAIHIPPNYQINEFIKPPVITTQ
PESITVFGAEDILLTCEASGNPPPEFRWKKDGVEFIPANYPGLSMSLGSGTFMTTGAGSG
PMSQYQGKYSCYADNELGTAVSKEVQLITENTPALQKEKKVKKKVEEGESVILKCNPPFS
TVPPVIHWMDKRLRHIELNDRVTQGRDGNLYFSHVTADDNRNDYTCNAQYLSARTILSKE
PISLTVTISNSVVRNRRPQMMRPSGAHSTYHTLRGQSLELECIVQGLPTPTVQWVRKDGQ
LSESRTLRDLSDRLLRFSNISESDGGEYQCSANNSQGTVTHIYTVSVEAAPYWTKEPVSQ
LYAPGETVRLDCQADGIPSPAVAWSMNGNPITGIDLDPRRTVRHGTLILRDVVITDTAVY
QCQAHNKHGTILVNTYIFVIELPPQILSADGQTYTVTEGQKAGLHCQTFGSPRPKVTWEV
DNGASLLADPRVNLLTNGSLQITNISHDDEGLYTCSISNTNMSINAELEVLNRTVILSPP
GDLRVRPGKTVIFTCLAQVDSKLTPPHIQWRRSGQKLMQSYAEDKYTFEGPDLIVANVQT
EDEGVYTCEVITNLDMAEASGSITLVDRPDPPTQLQVSDPKDRGVTLSWTAGDDHNSPVI
EFRVEFKDHVSNEWGWEELKRVSGTEESVNLALQPYVSYRFRVISVNDIGKSDPSTPSDL
HSTPPQAPDNNPEDVRSESTDPDTLVITWEEMDRRVFNGPEFQYKVFWRRVVGDGPTWHS
NVTTEPPYIVTEVGNFSAFEIKVQAVNQKGEGPEPDPVIGYSGENVPLEAPMDVGVVLLN
STAIRVTWAAVDRDTVRGHLLGYKIHLTRFGSRGHHRGRRAREPESSMVVETGANEEKRV
LGGLRPYSHYALTVTVFNSKGEGPPSDPPLSFSTDEGAPGPPMSLHLESPAETEMTLHWT
PPSQPNGVLKGYLLQYQQIVESDDSPVQVETIDDHTLTKLTLKQLDPKSRYRFYLRGRTS
AGDGEPITREGATTLDGAPPSNISLSVGEKSVNLSWVPGQRHRSVGFQVQYLNKNSGGKW
KQSEKLNSSQSFYQLKGLTPGSQYRLRFTFSNNTFWETEIRTEGAGVVDVQTGFATQGWF
IGLVSAIVLLLLVLLILCFIKRSKGGKYSVKDKEEGQVDSEARPMKDETFGEYRLWKRSL
ESDNEEKRTASQPSLCDESKLCTSEDNLDGYNNGSSAVTEVNMEDSLVSQYSRPSEATPD
PGTLQDSSPLNPTAATPTPTNNGLPNSVAILD
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcacgcagcgacagcaggttggcagtagggggcgacgcacccctctccccctc
ctcctccctctcttctccctcctcctatcccacactcctcagctcagccaagcagctata
cacatacctcctaactaccaaataaatgaattcataaagcccccagtgatcaccacccag
cctgagtccatcaccgtgttcggtgctgaagacatcctcctgacctgcgaagcctcagga
aaccctcctccggagtttcgttggaaaaaggatggggtggaatttatcccagccaattac
ccgggcctgtcgatgtctctgggttccggaaccttcatgacaacaggggcagggtcagga
cccatgagccaataccagggcaaatacagctgctacgctgataacgagctgggcaccgct
gtctctaaagaggtccagctcatcactgagaacaccccggccctccagaaagagaagaag
gtgaaaaagaaggtggaagaaggagagagtgtgatactgaaatgtaaccctcctttcagc
actgttcctcctgtcatccactggatggacaagagactccgtcacattgagctgaatgat
cgcgtgactcaaggccgggacgggaacctctacttctctcacgttacagctgacgacaac
cgcaacgactacacctgtaatgcccagtaccttagtgctcgcaccatcctctccaaggaa
cccatcagcctcaccgtaaccatctctaactcagtggtgcggaatcgaagaccccagatg
atgaggccctcaggggctcacagcacttaccacaccctccgcggccagagcctggagctg
gagtgcatcgtccagggcctccctacccctacagtccagtgggtgaggaaggacggtcag
ctgtccgagtctcgtacactcagagatctgtctgaccgcctgctgcgcttcagtaacatc
tcagagagcgacgggggagaataccagtgttcagccaacaactcacagggcacggtcaca
cacatctacaccgtcagcgtcgaagctgctccgtactggaccaaggagcccgtgagccag
ctttatgccccaggagagacagtgagactggactgtcaggccgatggcattccctcgcct
gctgtcgcctggagcatgaatggaaatcccatcacaggtatagacctggaccccaggcgt
actgtgagacatggaactctgattctgagagatgtggtcatcactgatacagcagtctac
cagtgtcaggcccacaacaaacacggaaccatcctagtcaatacctacatctttgtcatc
gagctgccgcctcagatcctgagtgcggacggacagacatacactgtcacagagggacag
aaggctggtctacactgtcagacctttgggtctcccagacctaaagttacatgggaggtg
gacaatggcgcgtctctactggctgaccccagggttaacctgctgaccaatggaagcctc
cagatcaccaacatctcccatgacgacgagggcctgtacacctgctccatcagcaacacc
aacatgtcaatcaacgctgagctggaggtgctgaacaggacagtgatcctgtctcctccc
ggggacctgcgtgttaggcctgggaagacggtcatatttacctgcctggctcaggtggac
tccaaactgacccccccacacatccaatggaggaggagtggacagaagctaatgcagtcg
tacgctgaggacaagtacacgtttgagggccccgacctgatcgtggccaacgtgcagact
gaggacgagggggtttacacctgtgaggtcatcactaacctggatatggctgaggccagc
ggatccatcacgctagtcgaccgtccagatcctcccacccagctccaggtctctgaccct
aaagaccgtggagtgactctcagctggaccgctggagatgaccacaacagccctgtcata
gagtttcgggtggagtttaaggatcatgtttctaacgagtggggttgggaggagctgaaa
cgtgttagtggaaccgaagagagtgtgaaccttgccttgcagccctatgtgtcctaccgt
ttccgggtcatctctgtcaacgacatcgggaagagtgatcccagcacgccttctgacctt
cacagcacgccacctcaagctccagacaacaaccctgaggatgtgaggagtgagtctaca
gacccagacaccctggtcatcacatgggaggaaatggacaggcgtgtgttcaacggaccg
gagttccagtacaaggtgttctggaggagggtagtaggtgacggccccacctggcactct
aatgtcaccactgagccaccgtacattgttactgaagtgggcaacttctcagccttcgag
atcaaagtacaggctgtcaatcagaaaggggagggacctgagccagaccctgtcattggc
tactccggagagaatgtccccctggaggctcctatggatgtgggtgttgtgctgctcaac
agtacagccatcagggtaacatgggcagcagtggacagagatactgtcagaggacaccta
ctgggatacaagatccacctgacaaggttcggctccaggggccaccaccggggtcggagg
gccagagagccggagagcagcatggtggtggagacaggggccaatgaggagaagagggtc
ctggggggccttagaccctactcccactatgccctcacagtcactgtgttcaacagcaag
ggagaggggcccccctccgacccccccctgtcattcagtaccgacgagggagctcctggc
ccccccatgtctctccacctggaaagccctgcagagacagagatgacccttcactggacc
cccccttctcagcccaacggggttctcaaaggatacctgctgcagtatcaacagatcgtg
gagagtgatgacagcccggtgcaggtggagaccatagacgaccacacgctgaccaaactg
accctgaagcagctggaccccaagagccgttaccgcttctacctgaggggccgcacctcg
gccggggacggagagcccattacaagggagggcgccaccacgctggacggagctcctccg
tccaacatcagcttgtctgtaggtgagaagtctgttaacctgagctgggtgccaggccag
agacacaggagtgtgggcttccaggtccagtacctcaacaagaacagcggtggaaagtgg
aagcagtctgagaagctgaactcgtcccagtcattctaccagctgaagggtctaacccca
ggatcacagtaccggctcagatttaccttcagcaacaacaccttctgggagacggagatc
aggacagagggagcaggagtggtggatgtgcagacaggctttgctactcagggctggttc
attgggcttgtgagcgccatcgtgctgttgctgctggtactgctcatcctctgcttcatc
aagaggagcaaggggggaaagtattcagtcaaagataaggaggagggtcaggtagactct
gaggcgcgccccatgaaggatgaaacgttcggagagtacagactttggaaaagatctcta
gaaagcgataacgaggagaagcggacagccagccagccgtctctgtgtgacgagagcaag
ctgtgtaccagtgaggacaacctggatggctacaacaacggcagcagtgctgtcaccgag
gtgaacatggaggattccctggtcagccagtacagccggcccagcgaagccaccccggac
ccgggtacactgcaagacagctcccccctcaaccccaccgccgccaccccaacacccacc
aacaacggcctgcctaactcggtggccatcttagattag
DBGET
integrated database retrieval system
