Oncorhynchus gorbuscha (pink salmon): 124046123
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Entry
124046123 CDS
T07892
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124046123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124046123
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124046123
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124046123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_4
Prok-RING_4
zf-RING_10
zf-C3HC4_4
zf-RING_6
zf-RING_11
Sina_RING
zf-rbx1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
124046123
NCBI-ProteinID:
XP_046222108
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All DBs
Position
LG10:complement(41994718..42008447)
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AA seq
395 aa
AA seq
DB search
MGSQVSSVEMSVRAGQGSDEVLVSQAVWDYLAAAGRPWLIDFQDKQGLSAGIIRRGERGG
CCAVRLRPVEGSRSGGGPGMMEGGPISNETRKSFIDLCRCARKEMSKQEGGPKWKRSVLP
CVGMRVLEGDGEASLLTPQPPQPRRSQRQQQRCRKPAEDEACVVLSNSMNSMNCMSHNAS
GQRKQDNMEVNCSMMASSHSHSQSEADDHTSCSICMGDMVERTTLERCGHTFCRSCLDQA
FKVKRACPVCRLVYGQLIGNQPASGTMMVERDPDLELSGHEGYGCICIIYSFTPGLQAPE
HPNPGVSYPGTDRVAYLPDSPEGNRVLGLLRRAFEQRLIFTIGTSMTTGMNNVITWNDIH
HKTAIWGGPRCFGYPDPTYLVRVTEELREKGITAD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggatcacaagtttcatctgttgaaatgagtgtgcgcgcggggcagggtagcgacgag
gttctggtgtcccaagcagtgtgggactacttggccgccgccggccggccctggctcata
gacttccaggacaagcagggcctcagcgcaggcattatccgcagaggggagcggggaggc
tgctgcgcagtgcggctacgccccgtagagggctcccgttctgggggaggaccagggatg
atggaggggggacccatctccaatgagacgcggaagtccttcatagacttatgccgctgt
gcccggaaagagatgagcaaacaggaggggggtcctaagtggaagaggtccgtgctgccc
tgtgttgggatgagggtcctggagggggatggagaggcgagcctgctaacacctcagcct
ccccagcccagacgctctcagaggcagcaacagaggtgtaggaagcctgcggaggatgag
gcctgtgttgtcctctccaactccatgaattccatgaactgcatgtcccacaatgcctca
ggacagaggaagcaggacaacatggaagtcaactgcagtatgatggcatcttctcatagc
cactcccagagtgaagcggacgaccacacctcatgttccatctgcatgggagacatggtg
gagaggaccacgctggagaggtgtggccacacattctgccggtcatgtctggaccaggcc
ttcaaggtgaagagagcatgtccggtgtgtcgtctggtgtacggccagctcatagggaat
cagccggcttccgggactatgatggtggagagggacccagatctggagttgtcgggacac
gagggctacgggtgtatctgcatcatctatagcttcacacctggtctacaggcgccggag
caccctaaccctggtgtaagctacccgggtacggaccgtgtggcttacctcccagacagc
ccagaggggaaccgggtcctgggcctgctccgccgggcctttgagcagcgcctcatcttc
actatagggacctccatgactacgggaatgaataacgtcattacctggaatgacatccac
cacaaaaccgccatatggggcggaccacgctgctttggctacccagaccccacttacctg
gtgagagtgactgaggaactcagagagaaaggcatcactgcggactga
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