Oncorhynchus gorbuscha (pink salmon): 124046133
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Entry
124046133 CDS
T07892
Name
(RefSeq) la-related protein 4 isoform X1
KO
K18763
la-related protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124046133
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124046133
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Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Se_S_carrier
Motif
Other DBs
NCBI-GeneID:
124046133
NCBI-ProteinID:
XP_046222140
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Position
LG10:complement(42551888..42570845)
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AA seq
826 aa
AA seq
DB search
MSSDQGGEPRLLQEEGDPGPKTCVVDDTPLGIGGGSGGMVTSKGAGLNPNAKVWQVSVAP
AEVPPDGAQWPPADVTEGYSESVSSPGCKPYSVGFTILEDSSSSVASTAEITVNGMDPPD
LGFTPTETTTGTSGETKLTEERPLSSENLRDSLKRELEFCFSRENLSKDLYLMSQMDSDQ
FVPIWTIASMESIKALTTDMELILDILRSSPMVQVDEKGEKVRPNHKRCIIILREVPEST
PVEEVESLFKNDNCPKVISVEFAHNNNWYITFQSDTDAQQAHRYLREEVKTFQGKPIMAR
IKAINTFFAKNGYRSMDSSMYAAQTQSQYNPNLYMQHVYSPPQQYPLYGIVPQTWTPSPT
PYFETPLAPFPNSGFVNGFSSTGHYKTGNNSLNMTRPYNRNRVPLYSRKNVINAFRAHVK
PQVGRPGEVAPVPLESLTGMRSPQPPTTGPGPLQTQTPPDLTSAFPLISTSSDLNDDGSM
AGRGRRTTYRGTRRRREDERITRPIPLAEVKVPVPKFDLAATNFPPLPGCVASTQGEPLL
ENRMSDVVRGLNRDKMPEQANKESSKEVGVGSVPAPTPAPGHEEAVCVSNLAQLAAKPAV
LSHGTPIHVPAPSVPHQEKKVERVTEAPAPKVTPPTPAPCAANPPGVPSTPPAMPGPKPQ
PSTVSSTPATPSTPATTATPASVEPRKLSYAEVCQRAPPPAPPASASPSTLAQPLRELRV
NKVEEPSSSSTTSSGDRPRGDRLDKAQDRDGGWECKEARPRDRDHRDRDSRDGSYYRSNG
PSRQGGYGGLKFREQRRGPQPACRSSPQGGPRHTGKEQNIPPVSPK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggaccagggcggagagccgcggctgctgcaggaggagggtgatccgggaccg
aagacctgtgtggtggacgacacaccacttgggatcgggggagggtcaggcggcatggtc
acctccaagggcgccggtctgaaccccaatgccaaggtgtggcaggtgtctgtggccccc
gctgaggtccctcctgacggagcacagtggcccccggctgatgtcactgagggttattcc
gagtctgtgtcctcccccggttgtaaaccgtacagtgttggtttcactatcctggaggat
agcagctcctcggtagcatccacagctgagatcactgtgaacggcatggatcccccagac
ctgggcttcacccccactgagaccactaccggcacatcaggggagacgaagctgactgag
gaaaggcccctctcatcagagaacctgagagactccctcaagagagagctggagttctgc
ttctcaagggagaacctgtccaaggacctgtacctgatgtcccagatggacagtgaccag
tttgtccccatatggaccattgccagcatggagagcatcaaggccctcactactgacatg
gagctcattctagacatactccgatcctctccaatggtacaagtggatgagaaaggagag
aaagtgcgtcctaatcacaaacgctgcatcatcatcctgagggaggttcctgagtcaaca
cctgtagaggaagtggagtctctctttaaaaatgacaactgtccaaaagtgattagtgtg
gagtttgcgcacaacaacaactggtacatcacattccaatctgacactgatgctcaacag
gcacacagatatctaagagaagaggtgaaaacatttcagggaaaacctatcatggcgagg
ataaaagccatcaacacgttctttgctaagaatggctaccgtagcatggacagcagcatg
tacgctgcccagacccagtcccagtacaaccctaacctgtacatgcagcacgtgtacagc
cctccgcagcagtaccctctctacggcatcgtaccacagacctggacaccctctcctaca
ccctacttcgagactcctctggcaccatttcccaacagtggctttgtgaatggattcagt
tctactggacactacaaaactggcaacaactcccttaatatgactcggccctataaccga
aaccgtgtacccctctattcaagaaagaatgtaataaatgccttcagggcacacgtgaag
cctcaggtggggagaccaggcgaagtggctcctgttcccctggagagcttgactggcatg
aggagtccccagccccccaccactggccctggacctctgcagacccagacacctccagac
ctgacctcagccttccccctcatctccacctcctcggacctcaacgatgacggcagcatg
gctggacgcggaagaaggactacatacagaggcacaagaaggaggagagaggatgagcgg
attacgaggcccatacccctggctgaggtaaaggtgccagtccctaaatttgacctggcc
gctactaacttccccccgctgccgggctgtgtagccagtacacagggagagcccctactg
gagaacaggatgtcagacgtggtgcgaggactgaacagagacaagatgccggaacaagca
aacaaggaatccagcaaggaagtgggtgtcggatcagtcccagccccgaccccagcccca
ggacacgaggaggcagtgtgtgtctctaatcttgctcagcttgcagccaaacctgctgta
ctctcccacggaacccccatccatgtacctgcccccagtgtaccccatcaggagaagaag
gtggagagggtaacagaggccccagcccccaaagtaaccccacccacacctgctccctgt
gcagccaacccacccggagtcccctccacaccgccagctatgcctggccccaagcctcaa
cccagcacagtgtcctccactccagctacacccagcaccccagccaccaccgctacccct
gcatcagtggagccccgtaagcttagctatgccgaggtgtgccagcgagccccccctccg
gcccccccagcctcagcctccccttccacgctagcccagcctctgcgtgagctgcgcgtc
aataaggtagaggagccaagctccagctctaccaccagctcgggcgaccgcccaagggga
gaccggctggacaaagcccaggatagggatggtggctgggagtgcaaggaggctcgtccc
cgtgatcgtgaccatcgagaccgggactcccgggatggaagctactaccgcagcaatggg
ccctccagacagggaggctatggaggcctcaagttccgtgaacagagacggggcccccaa
ccagcctgccgcagctccccccaaggaggcccccgacacaccggcaaagagcagaacatc
cccccggtatcgccaaagtaa
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