Oncorhynchus gorbuscha (pink salmon): 124046293
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Entry
124046293 CDS
T07892
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124046293 (sox11a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124046293 (sox11a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124046293
NCBI-ProteinID:
XP_046222444
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Position
LG10:58960644..58963496
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AA seq
357 aa
AA seq
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MVQHTDNSETEGSMSREATDSEESEFMACSPVPINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKPSAPFPEKSSSKMAKTPGKKCSKIKAKTQSKSSHSYGDDRVFPKITKTVKTEL
TDDDDADEYEEAYGMRIKQEDEEQMRLYNVAKVPASPTLSSSAESEGTSMYEEVRNAAPN
RLFYNFKNITKQSTMYPASVSPASSRSVSTSSSSSEDADDLLFDFSLNFAPSAHGQELGN
TNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacaccgacaacagcgagacggagggtagcatgtccagggaggctacagat
tcagaggagagcgaatttatggcttgcagccccgtgccgataaacccagactggtgcaag
acagcaaccggtcatataaagagacctatgaatgcatttatggtttggtctaaaattgaa
aggagaaagatcatggagcagtctccggacatgcataacgcagagatttccaaaaggctg
ggaaagcgatggaagatgctaaaggacagtgaaaagattcccttcatcagggaagcagag
agactcaggttaaaacacatggctgattatcccgattacaagtatagacccaagaaaaag
ccaaagctcgacagttcaaaaccatcagcaccatttccagagaaatccagcagcaaaatg
gcaaagactcccggtaagaaatgctcaaaaataaaggctaagacccaatctaaatcgtct
cacagctacggagatgaccgtgtgttccccaaaattacaaaaacggttaaaactgaactc
acagatgatgatgacgccgatgaatacgaggaggcctatggtatgcggattaaacaggag
gacgaggagcagatgaggctgtataatgtagcaaaagttcccgcgagtccaactttgagc
tcctcggctgagtccgaggggaccagcatgtacgaagaagtacggaatgcggcaccgaac
agactgttttacaatttcaaaaacattaccaagcagagcacaatgtaccctgcttccgtc
tcaccagcatcttctaggtcagtttccacatcttccagttccagcgaggacgcggacgac
ttgctttttgacttcagtttaaatttcgcccccagcgctcacggacaggagctgggaaac
acgaattcaggaaatctttccctctctcttgtggataaagatttggactctttcagcgag
ggcagtctgggctctcactttgaatttccagactattgcacaccagagctcagtgaaatg
atagcaggggactggttggaggcgaacttttctgacttggtgttcacatactaa
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