Oncorhynchus gorbuscha (pink salmon): 124046311
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Entry
124046311 CDS
T07892
Name
(RefSeq) homeobox-containing protein 1-like
KO
K24885
homeobox-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124046311
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124046311
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
HTH_31
HTH_26
DUF494
Motif
Other DBs
NCBI-GeneID:
124046311
NCBI-ProteinID:
XP_046222500
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All DBs
Position
LG10:complement(60569996..60600191)
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AA seq
577 aa
AA seq
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MHCKLAANMAIIKDYKCHDDLDETAESRQRMSQFTDEPRFTIEQIDLLQRLRRTGMTKPE
ILHALDTLDRLDRQHGHKFGRRPQTQPQPVGQGPTSNSNANMTSSSSSNNVVASSSTSTA
ATQTGYQANGSGGSGLSPSPSNNYDMSPPPPAVVSAPVALAAVAQNGVGGGGEIVAMTNG
KLSPPRFPISVSAVSGGVTGRGYGFEASEEELDVDDKVEQLMRRDSAIIKEEIKVFLGNR
RISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPGATLTMRPAPMS
LEDVVEWRQTPPPISSTPGSFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIANA
CNAVIQKPGKKLSDLEKVTSLKVYNWFANRRKEIKRRANIEEAAILESHGIDVQSPGGHS
NGDDIEGNDFPDQGCEVPLFEKRAVTRPFSRLDLSSPTQVPTLLPSWLAAWPGSGRGGLA
AQRASSLIGRSLLSGWGLAQGAGMEGSRLTGVSWSPPSPQDDDSTNHSNALEHQDPIALA
VEMAAVNHSILALATQAGGGLALGGTGSDIKTEVLDD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcaaattagctgctaatatggctatcataaaggactacaaatgccatgatgac
ctggacgagactgctgaatcgaggcaaaggatgtctcagttcaccgatgagcctcgcttc
accatcgagcagattgacctgctccaacggctgaggaggacggggatgaccaagccagag
atcctccacgccctggataccctggacagactggaccgccagcacggacacaagtttgga
cgccgcccccagacgcagccccagcctgtcggtcagggaccgacgtccaatagcaatgct
aatatgacgtcgtcttcctcgtccaataatgttgtggcgtcctcgtcgacgtccacggcc
gccacacagactggttaccaggcgaatgggagtggcgggagtggtctgtcgccgtcacct
agcaacaactatgatatgtcgccgccccctccggcggttgtatctgcccctgttgctttg
gcagcggtggctcagaacggggttggtggtggcggagagattgttgccatgacgaacgga
aagctgtctccaccacggtttcctatcagtgttagtgcggttagtggtggcgtgacgggg
agaggctacgggtttgaggccagcgaggaggaactagacgtggacgacaaagtggagcag
ctcatgagaagggacagtgccataatcaaggaggagatcaaggtattcctggggaacagg
cgcatctctcaggccgtggtggctcaggtcacaggtatcagtcagagtcgtatctcccac
tggctgctccagcagggctcggacctcagtgaacagaagaagagggccttctaccgctgg
taccagttggagaagaccaccccgggtgccactctgacgatgcggcctgcccccatgtct
ctggaggatgtggttgagtggcggcagactccgccccctataagctccacccccgggagc
ttccgtctgcgccgaggcagtcggttcacctggaggaaagaatgtctggctgtgatggag
agttacttcaatgacaaccagtaccctgatgaagctaaaagagaggagatcgctaacgcc
tgcaacgctgtcatccagaaaccagggaagaagctgtctgatctggagaaagtcacgtct
ctgaaggtctacaactggtttgccaaccgccgcaaggagatcaagagacgcgccaacata
gaagaagcagcaatcctggagagtcatgggatcgacgtccagagtcctggaggacactcc
aacggcgatgacattgaggggaatgacttccctgaccagggctgtgaagtccctctgttt
gagaagagggctgttaccagacccttcagtcgactagatctgtcctctcccacacaggtg
cccaccctgctgcccagctggctggcggcttggcccggctcgggcagggggggcttggct
gcccagagggctagctctctgattggccgctccttgctctctgggtggggtctcgctcag
ggggcggggatggaaggttccagactgacaggtgtgtcctggtctcccccttccccccag
gatgatgactccaccaatcacagcaatgccctggagcaccaggatcccatcgcccttgct
gtggagatggcggccgtcaatcacagcatcctcgccctggcaacgcaggcggggggagga
ttggccctgggcgggacaggaagtgacatcaaaacagaggtgctggacgactag
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