Oncorhynchus gorbuscha (pink salmon): 124046346
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Entry
124046346 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124046346
03036 Chromosome and associated proteins [BR:
ogo03036
]
124046346
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124046346
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124046346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
ARM_At3g06530
Beta-prop_RSE1_2nd
DUF4294
Motif
Other DBs
NCBI-GeneID:
124046346
NCBI-ProteinID:
XP_046222580
LinkDB
All DBs
Position
LG10:64340738..64441929
Genome browser
AA seq
1453 aa
AA seq
DB search
MDIMEDFPLPPPEMLVDDVPYAGEEEGEQFEFDDSGDEVPEADRLPPAPLAPDYGAQANG
VAPHPEPEGADPEHHLEGQPSNPDPPAATATVDTTTATIAASLPATMATTDTAVVAAAEG
EKASAVPADTDSDLPPPPPSEDSSPVGTDSVDKEVSSDDPPPANPRTTSQKKVNPYSVID
ITPVQLQQLEQEHGLAPPSPVERVGGEEEEGQDVSPTSPPCVPPGYSVPVPCGYATPSGV
PLITPAYTTPIIIRHFSLDEDVTVVATCNTSVDSVFSEEYPAIREEDALSKWVSDPANTA
WMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGEEGCGSSLDNGWSSSEFESYDEQSD
GEGQGENGLPDAFMRGKTPQKKTTHLSQDLTRLKEHYEKKMKDLMANTVGAVVLQQIKQE
HEQKMQKLVKAARDGTKEGLEKTKAVVKRGRSFIKTKTHCHERKSTCFEGEESELFIEVE
CFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKTYLDALKRILEQYEKPLSEIEPRLLS
DRKLKMTFYRIREILQCHALFQIALACRVAEWDSLEMIGDVFVASFSKSMVLDAYCEFVN
NFSTAMAVVRKTCASKPSFLDFLKHRQDTSSDRVTLYGLMMKPIQRFPQFILLLQDMLRN
TPVGHSDRLHLQMALTELETLAEKLNEKKRDADQRCEIRHIAKAMNERYLNKLLSNDSRY
LIRSDDMVETVYNDRGEVIKTKERRLFLLNDVLMCATPNVRCSVDGSGNVPLGQKFLLKW
SVPLSFVDVVEFGSSEDMGDNSRFTPHPHSGEKVVVNAKPNKLYMGPGQLYQDLQNLIHD
LSLVNQISSMIGSLKGNYQNVNPTVAHDWVSGLQRLILKKEEEIRAADRCRIQLQLPGKQ
DNRSGRATYFSAVFNTFSPAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIKKQKHP
LLLRQMPVVMSKLQDFKVECAVHNPEPHINIGSTADTPALGHGCVWVASCTNQMGQIAIV
AMQNSSPKVTECFNVESRILCMAYVPMEQSTQENRMGNPEKNLSLVGKASDNPTVCLGME
EGSIIVYKSSQQSKKVRLQHFFILDKSTVTSLVHKKQCLYAGLVSGSVAIYSRAQDGLWN
PDSPKVLKLGVLPVKAMLAVEGHVWASSGGQVFIISTNTHTVERQLEAHQEEGMVVSHMV
VAGVGIWIAFSSGSTLRLFHTETLEPLQDINVATPVHNILAGNQRVSVSSLLVCHGLLLV
GTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKFLTMAAAVCNRPSGNSDSPGSSP
PSQPGDTQDGEASPPPPPGATPSPAATQGRGVWLGEAGCSSMALHDSLSSSCGSLALSQG
SLEHGPEDGAIYDLVNDPANHQRGRRVKKVDVSSLLVVSGGLGHRRVNRKSKQSRQEETV
STIMVWQIPLLNM
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatggaagacttccctctcccacctcctgaaatgttggtggacgatgtgccc
tatgcgggtgaagaagagggggagcagtttgaatttgatgacagtggggatgaggtccct
gaggcagaccggctgccccccgcccctctggcccctgactacggggcccaggccaatggt
gtggccccccacccagaaccagaaggagcagaccccgaacaccacctagaggggcagccc
tcaaatccagatcccccagcagcgaccgcgactgtggacacaactactgctacaattgcc
gcatcacttccagctactatggccacaacagacacagcagttgtggctgcagcagaaggg
gaaaaagcttcagcagtcccagctgacacagacagtgacctaccccctcctccaccttca
gaggactcctctcctgtaggaacagactctgttgataaggaagtgtccagcgatgaccct
cccccagccaaccctaggaccacctcccagaagaaagtcaacccctactctgtgattgac
atcacccccgtccaactacagcagctggagcaggagcatgggcttgcccctccctcacca
gttgagagggtgggaggagaggaggaggagggacaggatgtttcacccaccagccccccc
tgtgtccccccgggttactctgtgcctgtgccctgtggatacgccaccccctctggcgtg
ccccttatcacgccagcctacaccacgcccatcatcatccgacacttctctctggacgag
gatgttactgtggtggcgacatgcaacacttcagtagacagtgtatttagtgaagagtat
cctgccatcagggaggaggatgctttgtccaaatgggtgtcggaccctgcaaacacagcc
tggatggaaaatccagatgaagtcatttatgatgacgtgcccagagagaactctgattca
actacagagccagatgagatgatctatgacgatgtggagtttggggaggagggctgtggc
agctccctagacaacggttggagctccagcgagtttgagagctacgacgagcagagtgac
ggggagggccagggggagaacggcctgcctgatgccttcatgagagggaagactccgcag
aagaagaccacccatctttctcaagatctgacacgcttgaaagaacactatgagaaaaag
atgaaagatcttatggcaaatacagtgggagcggtagtgctgcagcagattaaacaggaa
cacgagcagaagatgcagaagctggtgaaggcagctagagacgggaccaaagagggcctg
gagaagaccaaagcagtggtgaaaaggggacggtcgttcatcaagaccaaaacccactgt
catgagaggaagtcgacctgttttgagggtgaggagtcggagctcttcatcgaggtggaa
tgcttcaacatggagccagtgctcagtcccgtccctgaggggctctcacaacaacaggtg
gtgaggaggtgtatactgggctccatattagagagtgaaaagacctatctggatgcactg
aagcggattttagagcaatatgaaaagccactttcagagattgagcccaggttgctaagc
gacaggaagctcaagatgacgttctaccgtattcgggagattctccagtgccacgccctg
ttccagatcgccctggcatgccgcgtggccgagtgggacagtctggaaatgattggggac
gtctttgttgcctcgttctccaagtccatggtgctggacgcctactgtgagtttgtgaac
aacttcagcacggccatggcggtggtcaggaagacgtgtgcctccaaacccagcttcctg
gacttcctcaagcatcgtcaggataccagcagtgaccgggtcactctctatggactcatg
atgaagcctatccagagattccctcagttcattctgctgctgcaggacatgctgagaaac
accccagtaggccacagtgacaggctacacctacagatggccctgacagagctggaaacc
ctggctgagaagctcaacgagaagaagcgggacgctgaccagcgctgcgagatcagacac
atagccaaggccatgaacgaacgctacctcaacaagctcctgagcaacgacagccgttac
ctgattcgctcagacgacatggtggagacagtctacaacgaccgcggtgaggtcatcaag
accaaggagcgacgcctttttcttctcaacgacgtgctcatgtgtgccacgcccaacgtc
cggtgcagtgtggatggtagtggcaacgtccccctgggccagaagttcctgctgaagtgg
agtgtccctctgagctttgtggatgtggtagagtttggttccagtgaggacatgggcgac
aacagccgcttcaccccccatccccactctggagagaaggtggtcgtcaacgccaagcca
aataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctcattcacgac
ctcagcctggtcaaccagatctccagcatgatcggtagcctcaagggaaactaccagaac
gttaaccctacggtggcccatgactgggtgtcgggtctgcagcgtctcattctgaagaag
gaggaggagatccgggctgcagatcgctgtaggatccagctgcagctgcctggcaaacag
gacaacaggtctggcagggccacatacttttctgctgtgttcaataccttctctccagcc
atcaaacagtcctggatcagtaacctgcagatggccaagctggctctggaggaggacaat
ctgcagggctggttctttgcggaggatgatggtaaccagatcaagaagcagaaacatcct
ctcctgctcaggcagatgcctgtggtcatgtccaaactacaggatttcaaggtagagtgt
gcggtccataaccccgagccccacatcaacatagggagcacagcagacacacctgcactc
ggacacggctgtgtgtgggtggcgagctgcaccaaccagatgggtcagatagccatcgtg
gccatgcagaactccagccccaaggtgacagagtgtttcaatgtggagtctcggatcctg
tgcatggcttatgtacccatggagcagagtacccaggagaataggatggggaaccccgaa
aagaacctctccttagtggggaaggccagtgacaaccctactgtctgcctgggcatggag
gagggcagtatcatagtctataagagcagccagcagtccaagaaggtgcgtctccaacac
ttcttcatcctcgacaagtccaccgtgaccagcctggtgcacaagaagcagtgtttatac
gctggccttgtgagtggctcagttgccatctactccagagcacaagatggcttgtggaat
ccagactctcccaaggtgctgaagcttggggttctgccagtgaaggccatgctagctgtg
gagggccacgtctgggcttcctctggaggacaagtcttcatcattagcactaacacgcac
actgtggagaggcagttggaggcccaccaggaggaaggcatggttgtatcccacatggtg
gtggctggggtgggtatctggatagccttcagctctgggtccaccctcagactgttccac
acggagaccctggagcctctacaggacatcaacgtcgctacccctgtacacaacatcctg
gctggaaaccagagggtctctgtgagcagtctgctggtatgtcatggtctgctgctggtg
gggaccaacctgggggtgacagtggccctctctgtccctagactacagggcatccctaag
gtcacaggacggggcatggtatctttccatgcccaccacggcccagtgaagttcctcacc
atggcagctgccgtgtgcaaccggccctccggcaactcagacagcccaggcagcagccca
cccagccagccaggggacacccaggatggggaggcctccccacctccacccccaggcgcc
acacccagtcctgctgctactcagggccggggagtgtggctgggggaggcaggctgctcc
tccatggccctccatgactccctgtcctcctcctgtggctccctggctctgtcacagggc
tctctggagcacgggcctgaggacggggccatctatgacctggtcaatgacccagccaat
caccagaggggcaggagggtcaagaaggtggacgtcagctctctgcttgtggtgtcgggg
gggctgggtcaccgcagggtcaacaggaagagcaaacagtcccgccaggaggagactgtg
tccaccattatggtgtggcagatcccacttctcaacatgtaa
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integrated database retrieval system
