Oncorhynchus gorbuscha (pink salmon): 124046351
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Entry
124046351 CDS
T07892
Name
(RefSeq) claudin-20-like isoform X1
KO
K06087
claudin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03272
Virion - Hepatitis viruses
ogo04382
Cornified envelope formation
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124046351
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124046351
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124046351
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124046351
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124046351
04147 Exosome [BR:
ogo04147
]
124046351
Cilium and associated proteins [BR:
ogo03037
]
Other cilia and associated proteins
Stereociliary proteins
124046351
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
124046351
Exosomal proteins of colorectal cancer cells
124046351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
TMEM37
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
124046351
NCBI-ProteinID:
XP_046222596
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All DBs
Position
LG10:complement(64923411..64934609)
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AA seq
335 aa
AA seq
DB search
MASLRLKSSSPPPHPVFLCVYRNHCEQPDASKRSSAPAESIGAGTEELSRRLLPALAPES
STAVWGEEPRCLAGAGWMLTGGVGGHGRRRKMASTGMQIFAFVLALLGIMGAMMATLLPN
WKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCTLKYSVLSLPAYLQTARTTMVLSCV
MAAMGLCLASLGLKCTRWGGGRRAAKRQAAIASGGCFIAAGFLCLVPASWFTKEVITNFL
DHSVHESNKFEPGGAVYVAFLSAGFLFVGGSIFCVSCSGKRPGHQDMILLPPPDKLLLQQ
QQHLLQQQQQDQLQHQYCSLSPLDNKTGYSLQDYV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctaaggctgaaatcctcctcgccccctcctcaccccgtgtttttgtgtgtt
tacagaaatcattgcgaacaacctgacgcgtcaaaaaggagctctgcaccagccgagtcc
attggagccggcactgaggaactgagtcgtcggctgctgccagctctagcaccagaatcc
tctacagccgtctggggtgaggagccgaggtgcctggctggggctgggtggatgctaact
ggaggagtagggggccacggcagaaggaggaaaatggcatccacaggcatgcagatcttt
gcctttgtcctggcgctgctgggcatcatgggggccatgatggctacgctgctgcccaat
tggaaggtgagcgccgatgtaggctccaacatcatcacggccatctcccagatgcagggg
ctgtggatggactgcacctggtacagcaccggcatgttcagctgcaccttgaagtactcg
gtgctgtcgctgcccgcctacctgcagactgcccgcaccaccatggtgctgtcctgtgtg
atggctgccatgggcttgtgcctggcatccctggggctcaaatgtactcgctgggggggc
ggccggcgcgccgccaagaggcaggcggccatcgccagcgggggctgcttcatcgctgcc
ggcttcctgtgcctggtgcctgcttcctggttcaccaaagaggtcatcactaacttcctg
gaccacagcgtgcacgagagcaataagtttgagcccgggggcgccgtgtacgtggccttc
ctgtcggcaggcttcctctttgtgggggggtccatcttctgcgtgtcgtgctcggggaag
aggcccggccaccaggacatgatcttgctgccgccccctgataaactcttactgcagcag
caacagcacctcctacagcaacagcagcaggaccagctccagcaccagtactgctccctc
tccccactagacaataaaacaggctacagtctgcaggactatgtgtag
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