Oncorhynchus gorbuscha (pink salmon): 124046463
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Entry
124046463 CDS
T07892
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124046463 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124046463 (mlh3)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124046463 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124046463
NCBI-ProteinID:
XP_046222809
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Position
LG10:complement(70703587..70711049)
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AA seq
1242 aa
AA seq
DB search
MIKCLSKEVQGKLRSGIAIFSLQQCVEELILNSIDASATCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDNLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLPKARNTYYRFVQIHGLGRAQKLGEINHSHAQFELSGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSSSRQNDSPGTPPATRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIEEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGVQTHMEGVTLECNVGKTLASELVHRRQIEDSD
KMKSVYQTCNGVESEQGDRVGKLRDKEVLTGFEQEQEYNTTNPQCRPSSVDTDQGLQYDS
ITDSSVKDSESYKEVTKENESNAHLKSAISCPESSQHSLIFKTKEEHLKMSIEEGTEMKD
NAREHVSLSRCTVRAPCTLTQGIQSEMGTIKQTLPQPQDTELNPGGHRKIFLSHPYIHSS
LPSQKCLSHQSRKGLALESREKLATKRKWPMVEGPGHLHVYNRESKDLPTGIPSKISTFK
SCQKLALYKEVGSLDRFRRIYGKLTESNPVPVDVNSNYLAIDATASQTEHLVMNAKAVLP
YLEADQERDVTESRLDLMKDHKSPLTLSMFTKLKSLSARSSEISLATKLSHLKHQRTGVA
TSAFVHPPETTSNEDICPQDTVENNAILDINNGEQHNNTGRNRDFIPGCSTNPLPDEKEA
NNVTASCDWLHHYDDAVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKKG
IEYRCYPFQMDLVLPFLPKSKSGRVFSSGPDNRDDIQDSNSLSSLYSEWTNPVFARPPMV
GVDISSVQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPAACSE
TDGNLLVLVDQHAAHERVRLENLVADSYEDDPETPGERRLCSSTVAPPLEVSVTEEELRL
LRSCRPSLRGLGLDMQFSQIGDPQVLVGKVPMCFTEKESNELRRGRRSIIKPIVEEYLQE
QIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDCLSKEECCSLVGALSSCQLPFQCA
HGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYKAWELYGNR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgtcaaaagaagttcagggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtgttgaagagcttattctgaacagtattgatgctagtgcaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtcggaaacagatacttcacaagcaaatgcagttct
ttagaggacctagataatctcaaattctatggattcagaggagaagctgttgccagtatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtgaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacgactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttcactc
attcacccctctgtctctttcacactgaagaatgactgcacagggaccatggtggtgcag
ctccccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaaccactcccatgcacagtttgaactaagcggttatgtagga
cgggaaggccactacaacaacaccttacagttcctctatgtgaatgacaggctacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagttcaagtcgg
cagaatgacagccctggtacacctcctgccactaggagcccaaagcagagaagaggagcc
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gaagaggcggtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagacgga
gttaaggactccattggcaaaggtgtccaaacacacatggagggtgttaccctggaatgt
aatgttggaaagacccttgcatctgaacttgttcatcgacggcagatagaagactctgac
aagatgaaaagtgtttatcagacatgtaatggagttgaatcagagcagggtgacagagta
ggaaaactaagggacaaggaggtccttacgggttttgaacaggaacaagagtataatacc
acaaacccacaatgtcgaccaagctcagtagatacagaccaaggtctacagtatgattca
attacagattcatccgttaaagactcagagtcttacaaggaagttacgaaagagaatgaa
agcaatgcacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtcttatc
ttcaagacaaaggaagaacatctgaaaatgagtatagaagaaggaacagagatgaaggat
aatgcaagagagcatgtatccctctcaagatgcactgtgagagcaccatgtactctcact
cagggaatccagtcagagatgggcactatcaaacagacacttcctcaaccacaggataca
gaactgaatccaggtggacacagaaaaatctttctatcacatccatacattcatagcagt
ttaccctctcagaaatgtctctcccaccagagtagaaaagggctagcgttagaatctaga
gagaaacttgcaacaaaacgaaaatggcctatggtggaaggcccaggccatcttcacgtt
tacaacagagaaagtaaggaccttcccactggcatcccttcaaagatttctacgttcaag
tcatgtcaaaagctggctttatataaagaggttggatctctggacaggttcagaagaata
tacgggaagcttaccgaatccaatccagttcctgtcgacgttaatagcaattatttagca
attgatgccacagcttcccagaccgaacacttggttatgaatgccaaggctgttttgccc
tatcttgaagcggatcaagaaagggatgtcacagagtcacgtctggatctgatgaaagac
cacaaaagcccgttaacactctccatgttcaccaaactcaaatctctctcagctcggagc
agtgaaatatctttggctaccaaactctctcatttaaaacaccaaaggacaggggttgca
accagtgcatttgtacatcctccagagaccacttcaaatgaggatatatgtccccaggac
actgtagaaaacaatgctattctagacatcaataatggagaacaacacaataacactggc
cggaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaagcg
aacaatgtcacagcatcatgtgattggctgcatcactatgacgacgctgtggggaagctg
gtctacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagagaca
caagtgtcttgcacgtcagatgtcaccaacatggcaatcagtgtcatctccaaaaaaggg
attgagtacaggtgttacccatttcaaatggatctagtcttgcccttccttcccaaatcc
aaatcagggagagtttttagttcagggcctgacaatagagatgacattcaggactctaat
tcactgtcctccctgtactctgagtggactaaccctgtgtttgcacgacctcctatggtt
ggtgtggacatatcaagtgtgcaagctgaaggactggctgtgaagatccataacatcctc
tttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtggat
aagaagtttcttgcatgtcttatcaacacccaagaccaagaacctgcggcctgcagcgaa
actgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgtctt
gagaatctagttgcagattcgtacgaggatgatccagagacaccgggggagagacggcta
tgctcatccactgtagccccaccactggaggtcagcgtgacagaggaggagctgaggctg
ctcaggtcctgccggccatccttgaggggcctgggtctggacatgcagttctcgcagata
ggagatccccaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagagcaat
gaactccgccgggggagacgttctatcatcaagcccatagtggaggagtaccttcaagag
cagattgagttactgcgttcaactggcagagtgcgagggacattgcctcttacggtactt
aaagtcctcgcctcccttgcatgtcatggtgcaatcaaattcaatgactgcctgagtaag
gaggagtgttgcagcctggtaggcgctctatcttcatgccagctgcccttccagtgtgcc
catggccgcccatccatcgccccgctggtagacgtccttcacttgaatgaccaagaggaa
ccacctagaccaaacctcagaaaactgagaagaatgtacaaagcctgggaactttatgga
aatagataa
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