KEGG   Oncorhynchus gorbuscha (pink salmon): 124046505
Entry
124046505         CDS       T07892                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    124046505
Enzymes [BR:ogo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124046505
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124046505
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-UDP zf-rbx1 Prok-RING_4 zf-RING_4 zf-C3HC4_4 zf_RING_Vps8 zf-RING_10 Rtf2 zf-RING_11 IBR_1 Sina_RING RING_XB3-XBAT31 zf-RING_6 zf-ANAPC11 Zn_ribbon_6 TerY_C RNase_II_C_S1 TRAF3_RING zf-RING_Vps41
Other DBs
NCBI-GeneID: 124046505
NCBI-ProteinID: XP_046222892
LinkDB
Position
LG10:complement(72430690..72441708)
AA seq 206 aa
MHSIDTTPVHPGLNPKVSVRKLEQERIEIPDTRCSNNTNESTADSSNTSHLDTIEVLESS
DPLVAEEEMVDLTHQVFPSSFVDLTNNNDSIVVVDEGPKRRRDWESYVLSSDEEEAAVIV
PDSPATAPLSTAPEPSSIARSTPTTISCPICMDTFGEIIDGGRTVVSSQCGHLFCNTCIR
DSLAKSQTCPTCRKKLNHQQYHQIYI
NT seq 621 nt   +upstreamnt  +downstreamnt
atgcacagcatcgacactactccagttcatcctggtttgaacccgaaagtatctgtcaga
aagctggagcaagagagaatagagatccctgataccagatgctccaacaatacaaatgaa
agcacagcagacagcagcaacacgtcacaccttgataccatagaggtgctggagagcagt
gatcccttggttgcggaagaggaaatggttgatttgacccatcaggtttttccatcgtct
tttgtggacctcaccaacaacaatgactcaatagtggttgtagatgaaggtccaaagcga
agacgtgactgggaaagttacgtgctgagcagtgatgaagaagaggcagctgttattgtt
cctgacagtccagcgacagcccccctctccactgcccctgagcccagcagcatagccaga
tcaaccccaacaacgatcagttgtcccatctgtatggacacgtttggagagataattgat
ggtgggagaacggttgtctcctcccagtgtggtcacctattctgcaacacatgcatacgt
gactcacttgccaaatcacagacgtgcccaacctgcaggaagaaactgaatcatcagcag
tatcatcaaatttacatctaa

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