Oncorhynchus gorbuscha (pink salmon): 124046521
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Entry
124046521 CDS
T07892
Symbol
six1a
Name
(RefSeq) homeobox protein six1a
KO
K15614
homeobox protein SIX1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124046521 (six1a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124046521 (six1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
124046521
NCBI-ProteinID:
XP_046222925
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Position
LG10:complement(72901885..72904061)
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AA seq
284 aa
AA seq
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MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSLLLLQGNMSH
PGVSSYPMTGLGGAQPLHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatactaccttcgtttgggtttacccaggagcaagtagcctgcgtctgcgaggtc
ctgcaacaaggggggaatctggagaggctcggtcgttttctctggtctctcccagcgtgt
gaccacctccacaagaatgaaagtgtactgaaagcaaaggcggtggtcgccttccaccga
gggaacttcagagagctatacaagatcctggagagccaccagttttccccgcacaaccat
cccaagctgcagcagctgtggctgaaagcgcactacgtggaggcggagaaattgcgcggc
cgaccgcttggagccgtggggaagtatagggtccgcaggaaattccctctgccccgcacg
atctgggacggcgaggagaccagttattgctttaaggagaagtcaaggggtgttctgaga
gagtggtacacgcataacccctatccctccccgcgagagaaaagggagctggccgaggcc
acgggactgaccactacgcaggtcagcaattggttcaaaaacagacgccagagagacaga
gccgcagaagctaaagaaagagagaacagcgaaaacaataactccggcaacaacaaacag
aaccagctgtctcccctcgacggcggcaagtcgctcatgtccagctcggaagatgagttc
tctccaccacaaagccctgatcagaactctttgcttttgctccagggaaatatgagtcac
cccggcgtctcctcttaccctatgaccggcctcggtggcgcacagccgctgcatggaatg
cacggacacccgcaccaactccaagactcgttgctgggacctctaacgtcgagccttgtg
gatctaggctcctaa
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